RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 CCDC174Q6PII3 467 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 RABEP2Q9H5N1 569 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 CCDC144AA2RUR9 1427 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 PNISRQ8TF01 805 aaKnown RBP11.76□□□□□ -0.53
COL12A1-207ENST00000483888 GOLGA5Q8TBA6 731 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 LTV1Q96GA3 475 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-207ENST00000483888 CDKL5O76039 1030 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 CEP85LQ5SZL2 805 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 STX6O43752 255 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 DDX58O95786 925 aaKnown RBP11.76□□□□□ -0.53
COL12A1-207ENST00000483888 TUBBP07437 444 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 PRPF4BQ13523 1007 aaKnown RBP11.76□□□□□ -0.53
COL12A1-207ENST00000483888 CETN3O15182 167 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 SETDB1Q15047 1291 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 APBB1IPQ7Z5R6 666 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-207ENST00000483888 VPS36Q86VN1 386 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 VCX3BQ9H321 246 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 CCDC196A0A1B0GTZ2 297 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 CEP131Q9UPN4 1083 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 BIRC2Q13490 618 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 CCDC96Q2M329 555 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 HOMER2Q9NSB8 354 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 CETN2P41208 172 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 SH3BGRP55822 239 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-207ENST00000483888 WHAMMQ8TF30 809 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 JRKLQ9Y4A0 524 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 A6NNZ2 444 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 ZC3H6P61129 1189 aaKnown RBP11.75□□□□□ -0.53
COL12A1-207ENST00000483888 TUBB8Q3ZCM7 444 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 ATF7IPQ6VMQ6 1270 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 ARFGAP2Q8N6H7 521 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 TDRD12Q587J7 1177 aaKnown RBP11.75□□□□□ -0.53
COL12A1-207ENST00000483888 LARP1Q6PKG0 1096 aaKnown RBP11.75□□□□□ -0.53
COL12A1-207ENST00000483888 RNF10Q8N5U6 811 aaKnown RBP11.75□□□□□ -0.53
COL12A1-207ENST00000483888 MTMR7Q9Y216 660 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 RIPOR2Q9Y4F9 1068 aa11.75□□□□□ -0.53
COL12A1-207ENST00000483888 ANAPC15P60006 121 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 E2F4Q16254 413 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 TMEM57Q8N5G2 664 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 CAPZA3Q96KX2 299 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 CCDC184Q52MB2 194 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 VPS37DQ86XT2 251 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 N4BP2L2Q92802 583 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-207ENST00000483888 BAIAP2L1Q9UHR4 511 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 CCDC69A6NI79 296 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 GNAI3P08754 354 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 SLC8A1P32418 973 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 USP48Q86UV5 1035 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 SH2B1Q9NRF2 756 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-207ENST00000483888 LOC102724159A0A0B4J2E5 919 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 CSB-PGBD3P0DP91 1061 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 PWP2Q15269 919 aaKnown RBP11.74□□□□□ -0.53
COL12A1-207ENST00000483888 C20orf194Q5TEA3 1177 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 CNNM3Q8NE01 707 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 LUC7L3O95232 432 aaKnown RBP11.74□□□□□ -0.53
COL12A1-207ENST00000483888 SEC62Q99442 399 aaKnown RBP11.74□□□□□ -0.53
COL12A1-207ENST00000483888 TSPYL4Q9UJ04 414 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 USH1CQ9Y6N9 552 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 TMCO4Q5TGY1 634 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 INTS8Q75QN2 995 aaKnown RBP11.74□□□□□ -0.53
COL12A1-207ENST00000483888 PPP1R14CQ8TAE6 165 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 RRP15Q9Y3B9 282 aaKnown RBP11.74□□□□□ -0.53
COL12A1-207ENST00000483888 HPDP32754 393 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-207ENST00000483888 PNMA8AQ86V59 439 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-207ENST00000483888 CNKSR2Q8WXI2 1034 aa11.74□□□□□ -0.53
COL12A1-207ENST00000483888 ERCC3P19447 782 aa11.73□□□□□ -0.53
COL12A1-207ENST00000483888 C17orf53Q8N3J3 647 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-207ENST00000483888 ZWINTO95229 277 aa11.73□□□□□ -0.53
COL12A1-207ENST00000483888 EXOSC9Q06265 439 aaKnown RBP11.73□□□□□ -0.53
COL12A1-207ENST00000483888 SPTY2D1Q68D10 685 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-207ENST00000483888 TSC1Q92574 1164 aa11.73□□□□□ -0.53
COL12A1-207ENST00000483888 MIER3Q7Z3K6 550 aa11.73□□□□□ -0.53
COL12A1-207ENST00000483888 CASQ2O14958 399 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-207ENST00000483888 LIG3P49916 1009 aa11.73□□□□□ -0.53
COL12A1-207ENST00000483888 PLEKHH2Q8IVE3 1493 aa11.73□□□□□ -0.53
COL12A1-207ENST00000483888 RPSAP08865 295 aaKnown RBP11.73□□□□□ -0.53
COL12A1-207ENST00000483888 TACO1Q9BSH4 297 aaKnown RBP11.73□□□□□ -0.53
COL12A1-207ENST00000483888 CIB2O75838 187 aa11.73□□□□□ -0.53
COL12A1-207ENST00000483888 NOP2P46087 812 aaKnown RBP11.73□□□□□ -0.53
COL12A1-207ENST00000483888 ZKSCAN8Q15776 578 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-207ENST00000483888 VIMP08670 466 aaKnown RBP11.72□□□□□ -0.53
COL12A1-207ENST00000483888 RAB3GAP1Q15042 981 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 SNCBQ16143 134 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.72□□□□□ -0.53
COL12A1-207ENST00000483888 CNPY2Q9Y2B0 182 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 CFAP58Q5T655 872 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 CCDC97Q96F63 343 aaPredicted RBP11.72□□□□□ -0.53
COL12A1-207ENST00000483888 TRAK1Q9UPV9 953 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 KIF1CO43896 1103 aaKnown RBP11.72□□□□□ -0.53
COL12A1-207ENST00000483888 KRT32Q14532 448 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 CCDC30Q5VVM6 783 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 TFIP11Q9UBB9 837 aaKnown RBP11.72□□□□□ -0.53
COL12A1-207ENST00000483888 ANAPC4Q9UJX5 808 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 COG7P83436 770 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 ODF2LQ9ULJ1 636 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 LRRD1A4D1F6 860 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 GJB2P29033 226 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 TCP11L2Q8N4U5 519 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 UBAC1Q9BSL1 405 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 UACAQ9BZF9 1416 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms