RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 RXRBP28702 533 aa20.35■□□□□ 0.85
RFTN1-209ENST00000483671 ITPK1Q13572 414 aa20.35■□□□□ 0.85
RFTN1-209ENST00000483671 PTF1AQ7RTS3 328 aa20.35■□□□□ 0.85
RFTN1-209ENST00000483671 SIRT2Q8IXJ6 389 aa20.35■□□□□ 0.85
RFTN1-209ENST00000483671 SMC5Q8IY18 1101 aa20.35■□□□□ 0.85
RFTN1-209ENST00000483671 C1orf115Q9H7X2 142 aa20.35■□□□□ 0.85
RFTN1-209ENST00000483671 RGS17Q9UGC6 210 aaPredicted RBP20.35■□□□□ 0.85
RFTN1-209ENST00000483671 IGKV5-2P06315 115 aa20.34■□□□□ 0.85
RFTN1-209ENST00000483671 FAM182BQ5T319 152 aa20.34■□□□□ 0.85
RFTN1-209ENST00000483671 CEP85Q6P2H3 762 aa20.34■□□□□ 0.85
RFTN1-209ENST00000483671 INTS5Q6P9B9 1019 aaKnown RBP20.34■□□□□ 0.85
RFTN1-209ENST00000483671 TTLL7Q6ZT98 887 aa20.34■□□□□ 0.85
RFTN1-209ENST00000483671 CCDC87Q9NVE4 849 aa20.34■□□□□ 0.85
RFTN1-209ENST00000483671 HDAC5Q9UQL6 1122 aa20.34■□□□□ 0.85
RFTN1-209ENST00000483671 ZBTB1Q9Y2K1 713 aa20.34■□□□□ 0.85
RFTN1-209ENST00000483671 LY75O60449 1722 aa20.33■□□□□ 0.85
RFTN1-209ENST00000483671 NEURL1BA8MQ27 555 aa20.33■□□□□ 0.85
RFTN1-209ENST00000483671 UBTFL1P0CB47 393 aaPredicted RBP20.33■□□□□ 0.85
RFTN1-209ENST00000483671 CRKLP46109 303 aaKnown RBP20.32■□□□□ 0.84
RFTN1-209ENST00000483671 EIF5P55010 431 aaKnown RBP20.32■□□□□ 0.84
RFTN1-209ENST00000483671 CNTNAP4Q9C0A0 1308 aa20.32■□□□□ 0.84
RFTN1-209ENST00000483671 KIF6Q6ZMV9 814 aa20.31■□□□□ 0.84
RFTN1-209ENST00000483671 GCC1Q96CN9 775 aa20.31■□□□□ 0.84
RFTN1-209ENST00000483671 MYD88Q99836 296 aa20.31■□□□□ 0.84
RFTN1-209ENST00000483671 COL15A1P39059 1388 aa20.31■□□□□ 0.84
RFTN1-209ENST00000483671 MAP3K15Q6ZN16 1313 aa20.31■□□□□ 0.84
RFTN1-209ENST00000483671 GRM8O00222 908 aa20.3■□□□□ 0.84
RFTN1-209ENST00000483671 GCKRQ14397 625 aa20.3■□□□□ 0.84
RFTN1-209ENST00000483671 CWF19L2Q2TBE0 894 aaKnown RBP20.3■□□□□ 0.84
RFTN1-209ENST00000483671 RC3H1Q5TC82 1133 aaKnown RBP20.3■□□□□ 0.84
RFTN1-209ENST00000483671 ERVV-1B6SEH8 477 aa20.29■□□□□ 0.84
RFTN1-209ENST00000483671 HMMRO75330 724 aa20.29■□□□□ 0.84
RFTN1-209ENST00000483671 NBPF7P0C2Y1 421 aaPredicted RBP20.29■□□□□ 0.84
RFTN1-209ENST00000483671 TRIM28Q13263 835 aaKnown RBP20.29■□□□□ 0.84
RFTN1-209ENST00000483671 MYH14Q7Z406 1995 aaKnown RBP20.29■□□□□ 0.84
RFTN1-209ENST00000483671 ATP8B2P98198 1209 aa20.28■□□□□ 0.84
RFTN1-209ENST00000483671 LINC00116Q8NCU8 138 aa20.28■□□□□ 0.84
RFTN1-209ENST00000483671 DCTPP1Q9H773 170 aa20.28■□□□□ 0.84
RFTN1-209ENST00000483671 C9orf78Q9NZ63 289 aaPredicted RBP20.28■□□□□ 0.84
RFTN1-209ENST00000483671 LRRFIP2Q9Y608 721 aaKnown RBP20.28■□□□□ 0.84
RFTN1-209ENST00000483671 RGL2O15211 777 aa20.27■□□□□ 0.84
RFTN1-209ENST00000483671 TCIRG1Q13488 830 aa20.27■□□□□ 0.84
RFTN1-209ENST00000483671 MTX1Q13505 466 aa20.27■□□□□ 0.84
RFTN1-209ENST00000483671 POTEAQ6S8J7 498 aa20.27■□□□□ 0.84
RFTN1-209ENST00000483671 ISCA1Q9BUE6 129 aa20.27■□□□□ 0.84
RFTN1-209ENST00000483671 HSP90AB3PQ58FF7 597 aa20.27■□□□□ 0.83
RFTN1-209ENST00000483671 GIGYF2Q6Y7W6 1299 aaKnown RBP20.27■□□□□ 0.83
RFTN1-209ENST00000483671 CCDC191Q8NCU4 936 aa20.27■□□□□ 0.83
RFTN1-209ENST00000483671 ZBTB3Q9H5J0 574 aa20.27■□□□□ 0.83
RFTN1-209ENST00000483671 CCNL1Q9UK58 526 aaPredicted RBP20.27■□□□□ 0.83
RFTN1-209ENST00000483671 HMGB2P26583 209 aaKnown RBP20.26■□□□□ 0.83
RFTN1-209ENST00000483671 NUCB1Q02818 461 aa20.25■□□□□ 0.83
RFTN1-209ENST00000483671 NPM2Q86SE8 214 aaKnown RBP20.25■□□□□ 0.83
RFTN1-209ENST00000483671 SSH3Q8TE77 659 aa20.25■□□□□ 0.83
RFTN1-209ENST00000483671 CWC25Q9NXE8 425 aaPredicted RBP20.25■□□□□ 0.83
RFTN1-209ENST00000483671 PDZRN3Q9UPQ7 1066 aa20.25■□□□□ 0.83
RFTN1-209ENST00000483671 AFDNP55196 1824 aaKnown RBP20.24■□□□□ 0.83
RFTN1-209ENST00000483671 A0A087WZG4 1122 aa20.24■□□□□ 0.83
RFTN1-209ENST00000483671 H7C1W4 665 aa20.24■□□□□ 0.83
RFTN1-209ENST00000483671 CASP7P55210 303 aa20.24■□□□□ 0.83
RFTN1-209ENST00000483671 POLA2Q14181 598 aa20.24■□□□□ 0.83
RFTN1-209ENST00000483671 SLC27A3Q5K4L6 730 aa20.24■□□□□ 0.83
RFTN1-209ENST00000483671 DZIP3Q86Y13 1208 aaKnown RBP20.24■□□□□ 0.83
RFTN1-209ENST00000483671 ZNF330Q9Y3S2 320 aaPredicted RBP20.24■□□□□ 0.83
RFTN1-209ENST00000483671 TAF1LQ8IZX4 1826 aa20.24■□□□□ 0.83
RFTN1-209ENST00000483671 ATP5J2-PTCD1G3V325 749 aa20.23■□□□□ 0.83
RFTN1-209ENST00000483671 KAZALD1Q96I82 304 aa20.23■□□□□ 0.83
RFTN1-209ENST00000483671 ANKRD36CQ5JPF3 1778 aa20.22■□□□□ 0.83
RFTN1-209ENST00000483671 TRIM37O94972 964 aa20.22■□□□□ 0.83
RFTN1-209ENST00000483671 PNMA6EA0A0J9YXQ4 647 aa20.21■□□□□ 0.83
RFTN1-209ENST00000483671 RPS6KA4O75676 772 aa20.21■□□□□ 0.83
RFTN1-209ENST00000483671 CAMTA2O94983 1202 aa20.21■□□□□ 0.83
RFTN1-209ENST00000483671 SUCLG2Q96I99 432 aa20.21■□□□□ 0.83
RFTN1-209ENST00000483671 C4BP0C0L5 1744 aa20.2■□□□□ 0.82
RFTN1-209ENST00000483671 HLFQ16534 295 aa20.2■□□□□ 0.82
RFTN1-209ENST00000483671 RABL6Q3YEC7 729 aaPredicted RBP20.2■□□□□ 0.82
RFTN1-209ENST00000483671 PPP1R42Q7Z4L9 355 aa20.2■□□□□ 0.82
RFTN1-209ENST00000483671 BCORQ6W2J9 1755 aa20.19■□□□□ 0.82
RFTN1-209ENST00000483671 PLSCR1O15162 318 aa20.19■□□□□ 0.82
RFTN1-209ENST00000483671 CHD1LQ86WJ1 897 aa20.19■□□□□ 0.82
RFTN1-209ENST00000483671 ZNF34Q8IZ26 560 aa20.19■□□□□ 0.82
RFTN1-209ENST00000483671 TBC1D2BQ9UPU7 963 aa20.19■□□□□ 0.82
RFTN1-209ENST00000483671 NUP98P52948 1817 aa20.19■□□□□ 0.82
RFTN1-209ENST00000483671 KCNQ4P56696 695 aa20.18■□□□□ 0.82
RFTN1-209ENST00000483671 CLEC4GQ6UXB4 293 aa20.18■□□□□ 0.82
RFTN1-209ENST00000483671 UBE3BQ7Z3V4 1068 aa20.18■□□□□ 0.82
RFTN1-209ENST00000483671 NLRP10Q86W26 655 aa20.18■□□□□ 0.82
RFTN1-209ENST00000483671 RGPD3A6NKT7 1758 aaPredicted RBP20.17■□□□□ 0.82
RFTN1-209ENST00000483671 RGPD4Q7Z3J3 1758 aa20.17■□□□□ 0.82
RFTN1-209ENST00000483671 SRGAP3O43295 1099 aa20.17■□□□□ 0.82
RFTN1-209ENST00000483671 PCCAP05165 728 aaPredicted RBP20.17■□□□□ 0.82
RFTN1-209ENST00000483671 BICC1Q9H694 974 aaKnown RBP20.17■□□□□ 0.82
RFTN1-209ENST00000483671 LRRC4BQ9NT99 713 aa20.17■□□□□ 0.82
RFTN1-209ENST00000483671 SCN7AQ01118 1682 aa20.16■□□□□ 0.82
RFTN1-209ENST00000483671 EP400Q96L91 3159 aa20.16■□□□□ 0.82
RFTN1-209ENST00000483671 SKAP1Q86WV1 359 aa20.16■□□□□ 0.82
RFTN1-209ENST00000483671 ZBTB38Q8NAP3 1195 aaPredicted RBP20.16■□□□□ 0.82
RFTN1-209ENST00000483671 ZNF652Q9Y2D9 606 aa20.16■□□□□ 0.82
RFTN1-209ENST00000483671 NOP58Q9Y2X3 529 aaKnown RBP20.16■□□□□ 0.82
RFTN1-209ENST00000483671 CDHR2Q9BYE9 1310 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms