RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 ZNF330Q9Y3S2 320 aaPredicted RBP14.61□□□□□ -0.07
PTPN18-212ENST00000483617 TAF7Q15545 349 aaPredicted RBP14.6□□□□□ -0.07
PTPN18-212ENST00000483617 ZNF428Q96B54 188 aa14.6□□□□□ -0.07
PTPN18-212ENST00000483617 TSPYL4Q9UJ04 414 aa14.6□□□□□ -0.07
PTPN18-212ENST00000483617 GTF3C3Q9Y5Q9 886 aa14.6□□□□□ -0.07
PTPN18-212ENST00000483617 BCORQ6W2J9 1755 aa14.6□□□□□ -0.07
PTPN18-212ENST00000483617 A1BGP04217 495 aa14.59□□□□□ -0.07
PTPN18-212ENST00000483617 SERPINB2P05120 415 aa14.59□□□□□ -0.07
PTPN18-212ENST00000483617 ZNF853P0CG23 659 aa14.59□□□□□ -0.07
PTPN18-212ENST00000483617 CHRNA5P30532 468 aa14.59□□□□□ -0.07
PTPN18-212ENST00000483617 EXOSC9Q06265 439 aaKnown RBP14.59□□□□□ -0.07
PTPN18-212ENST00000483617 DALRD3Q5D0E6 543 aaKnown RBP14.59□□□□□ -0.07
PTPN18-212ENST00000483617 CHMP4AQ9BY43 222 aa14.59□□□□□ -0.07
PTPN18-212ENST00000483617 GPBP1L1Q9HC44 474 aaPredicted RBP14.59□□□□□ -0.07
PTPN18-212ENST00000483617 DLEC1Q9Y238 1755 aa14.58□□□□□ -0.08
PTPN18-212ENST00000483617 PRAMEF22A3QJZ6 481 aa14.58□□□□□ -0.08
PTPN18-212ENST00000483617 CHL1O00533 1208 aa14.58□□□□□ -0.08
PTPN18-212ENST00000483617 SNRPA1P09661 255 aaKnown RBP14.58□□□□□ -0.08
PTPN18-212ENST00000483617 ARHGAP27Q6ZUM4 889 aa14.58□□□□□ -0.08
PTPN18-212ENST00000483617 NPM2Q86SE8 214 aaKnown RBP14.58□□□□□ -0.08
PTPN18-212ENST00000483617 ZNF526Q8TF50 670 aaPredicted RBP14.58□□□□□ -0.08
PTPN18-212ENST00000483617 MBIPQ9NS73 344 aa14.58□□□□□ -0.08
PTPN18-212ENST00000483617 TBC1D2BQ9UPU7 963 aa14.58□□□□□ -0.08
PTPN18-212ENST00000483617 USP16Q9Y5T5 823 aa14.58□□□□□ -0.08
PTPN18-212ENST00000483617 CARMIL3Q8ND23 1372 aa14.58□□□□□ -0.08
PTPN18-212ENST00000483617 LAMB4A4D0S4 1761 aa14.57□□□□□ -0.08
PTPN18-212ENST00000483617 KDM3BQ7LBC6 1761 aa14.57□□□□□ -0.08
PTPN18-212ENST00000483617 TBC1D9BQ66K14 1250 aa14.57□□□□□ -0.08
PTPN18-212ENST00000483617 BICDL1Q6ZP65 573 aa14.57□□□□□ -0.08
PTPN18-212ENST00000483617 CAMTA2O94983 1202 aa14.56□□□□□ -0.08
PTPN18-212ENST00000483617 RRP1P56182 461 aaKnown RBP14.56□□□□□ -0.08
PTPN18-212ENST00000483617 PIP4K2AP48426 406 aaPredicted RBP14.55□□□□□ -0.08
PTPN18-212ENST00000483617 ERICH6BQ5W0A0 696 aa14.55□□□□□ -0.08
PTPN18-212ENST00000483617 DZIP3Q86Y13 1208 aaKnown RBP14.55□□□□□ -0.08
PTPN18-212ENST00000483617 MS4A1P11836 297 aa14.54□□□□□ -0.08
PTPN18-212ENST00000483617 TWISTNBQ3B726 338 aaPredicted RBP14.54□□□□□ -0.08
PTPN18-212ENST00000483617 ALDH1L2Q3SY69 923 aa14.54□□□□□ -0.08
PTPN18-212ENST00000483617 C2CD5Q86YS7 1000 aa14.54□□□□□ -0.08
PTPN18-212ENST00000483617 MIS18AQ9NYP9 233 aa14.54□□□□□ -0.08
PTPN18-212ENST00000483617 ANKRD31Q8N7Z5 1873 aa14.54□□□□□ -0.08
PTPN18-212ENST00000483617 RNF123Q5XPI4 1314 aa14.53□□□□□ -0.08
PTPN18-212ENST00000483617 RARSP54136 660 aaKnown RBP14.53□□□□□ -0.08
PTPN18-212ENST00000483617 SMC4Q9NTJ3 1288 aa14.53□□□□□ -0.08
PTPN18-212ENST00000483617 COL11A2P13942 1736 aaPredicted RBP14.52□□□□□ -0.08
PTPN18-212ENST00000483617 NBPF26B4DH59 902 aa14.52□□□□□ -0.09
PTPN18-212ENST00000483617 H0YIN7 160 aa14.52□□□□□ -0.09
PTPN18-212ENST00000483617 IPO8O15397 1037 aaKnown RBP14.52□□□□□ -0.09
PTPN18-212ENST00000483617 C9orf131Q5VYM1 1079 aa14.52□□□□□ -0.09
PTPN18-212ENST00000483617 PRR5LQ6MZQ0 368 aa14.52□□□□□ -0.09
PTPN18-212ENST00000483617 NBPF10Q6P3W6 841 aaKnown RBP14.52□□□□□ -0.09
PTPN18-212ENST00000483617 NBPF15Q8N660 670 aa14.52□□□□□ -0.09
PTPN18-212ENST00000483617 CNBD1Q8NA66 436 aa14.52□□□□□ -0.09
PTPN18-212ENST00000483617 SETDB2Q96T68 719 aa14.52□□□□□ -0.09
PTPN18-212ENST00000483617 ZNF652Q9Y2D9 606 aa14.52□□□□□ -0.09
PTPN18-212ENST00000483617 KIF16BQ96L93 1317 aa14.51□□□□□ -0.09
PTPN18-212ENST00000483617 CLEC4GQ6UXB4 293 aa14.51□□□□□ -0.09
PTPN18-212ENST00000483617 TTLL6Q8N841 843 aa14.51□□□□□ -0.09
PTPN18-212ENST00000483617 BRIP1Q9BX63 1249 aa14.51□□□□□ -0.09
PTPN18-212ENST00000483617 PDZRN3Q9UPQ7 1066 aa14.51□□□□□ -0.09
PTPN18-212ENST00000483617 ELL2O00472 640 aaPredicted RBP14.5□□□□□ -0.09
PTPN18-212ENST00000483617 RGL2O15211 777 aa14.5□□□□□ -0.09
PTPN18-212ENST00000483617 NPHP1O15259 732 aa14.5□□□□□ -0.09
PTPN18-212ENST00000483617 PDE6BP35913 854 aa14.5□□□□□ -0.09
PTPN18-212ENST00000483617 EIF4A1P60842 406 aaKnown RBP14.5□□□□□ -0.09
PTPN18-212ENST00000483617 ST5P78524 1137 aa14.5□□□□□ -0.09
PTPN18-212ENST00000483617 CCDC24Q8N4L8 307 aa14.5□□□□□ -0.09
PTPN18-212ENST00000483617 KIF3CO14782 793 aa14.49□□□□□ -0.09
PTPN18-212ENST00000483617 VAMP4O75379 141 aa14.49□□□□□ -0.09
PTPN18-212ENST00000483617 BCAR3O75815 825 aa14.49□□□□□ -0.09
PTPN18-212ENST00000483617 RASSF7Q02833 373 aa14.49□□□□□ -0.09
PTPN18-212ENST00000483617 C8orf58Q8NAV2 365 aa14.49□□□□□ -0.09
PTPN18-212ENST00000483617 FRAT1Q92837 279 aaPredicted RBP14.49□□□□□ -0.09
PTPN18-212ENST00000483617 STK31Q9BXU1 1019 aa14.49□□□□□ -0.09
PTPN18-212ENST00000483617 RNF181Q9P0P0 153 aa14.49□□□□□ -0.09
PTPN18-212ENST00000483617 HOXB7P09629 217 aa14.48□□□□□ -0.09
PTPN18-212ENST00000483617 ZNF622Q969S3 477 aaKnown RBP eCLIP14.48□□□□□ -0.09
PTPN18-212ENST00000483617 SBF1O95248 1867 aa14.48□□□□□ -0.09
PTPN18-212ENST00000483617 IRX6P78412 446 aaPredicted RBP14.47□□□□□ -0.09
PTPN18-212ENST00000483617 CCDC30Q5VVM6 783 aa14.47□□□□□ -0.09
PTPN18-212ENST00000483617 ZKSCAN2Q63HK3 967 aa14.47□□□□□ -0.09
PTPN18-212ENST00000483617 NBPF5PQ86XG9 351 aaPredicted RBP14.47□□□□□ -0.09
PTPN18-212ENST00000483617 SSH1Q8WYL5 1049 aa14.47□□□□□ -0.09
PTPN18-212ENST00000483617 NIP7Q9Y221 180 aaKnown RBP eCLIP14.47□□□□□ -0.09
PTPN18-212ENST00000483617 PDE3AQ14432 1141 aa14.46□□□□□ -0.09
PTPN18-212ENST00000483617 FTSJ3Q8IY81 847 aaKnown RBP14.46□□□□□ -0.09
PTPN18-212ENST00000483617 TSPYL6Q8N831 410 aa14.46□□□□□ -0.09
PTPN18-212ENST00000483617 BCL2L13Q9BXK5 485 aa14.46□□□□□ -0.09
PTPN18-212ENST00000483617 ARFGEF2Q9Y6D5 1785 aa14.46□□□□□ -0.09
PTPN18-212ENST00000483617 CACNA1FO60840 1977 aa14.45□□□□□ -0.1
PTPN18-212ENST00000483617 ERBB4Q15303 1308 aa14.45□□□□□ -0.1
PTPN18-212ENST00000483617 ZC3H4Q9UPT8 1303 aaKnown RBP14.45□□□□□ -0.1
PTPN18-212ENST00000483617 NFKBIEO00221 500 aa14.45□□□□□ -0.1
PTPN18-212ENST00000483617 PLIN1O60240 522 aa14.45□□□□□ -0.1
PTPN18-212ENST00000483617 BRPF1P55201 1214 aaPredicted RBP14.45□□□□□ -0.1
PTPN18-212ENST00000483617 HLFQ16534 295 aa14.45□□□□□ -0.1
PTPN18-212ENST00000483617 STYK1Q6J9G0 422 aa14.45□□□□□ -0.1
PTPN18-212ENST00000483617 TIAM2Q8IVF5 1701 aa14.45□□□□□ -0.1
PTPN18-212ENST00000483617 NMRK2Q9NPI5 230 aa14.45□□□□□ -0.1
PTPN18-212ENST00000483617 MAP3K15Q6ZN16 1313 aa14.44□□□□□ -0.1
PTPN18-212ENST00000483617 KDM2BQ8NHM5 1336 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms