RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ZC3H4Q9UPT8 1303 aaKnown RBP18.63■□□□□ 0.57
VARS-226ENST00000483275 PPP2R1AP30153 589 aa18.62■□□□□ 0.57
VARS-226ENST00000483275 SETDB2Q96T68 719 aa18.62■□□□□ 0.57
VARS-226ENST00000483275 POTECB2RU33 542 aa18.6■□□□□ 0.57
VARS-226ENST00000483275 VEGFAP15692 232 aaPredicted RBP18.6■□□□□ 0.57
VARS-226ENST00000483275 PRPF40BQ6NWY9 871 aaKnown RBP18.6■□□□□ 0.57
VARS-226ENST00000483275 NPM2Q86SE8 214 aaKnown RBP18.6■□□□□ 0.57
VARS-226ENST00000483275 KDM3BQ7LBC6 1761 aa18.6■□□□□ 0.57
VARS-226ENST00000483275 FAM177BA6PVY3 158 aa18.59■□□□□ 0.57
VARS-226ENST00000483275 NBPF26B4DH59 902 aa18.59■□□□□ 0.57
VARS-226ENST00000483275 ST5P78524 1137 aa18.59■□□□□ 0.57
VARS-226ENST00000483275 ERFEQ4G0M1 354 aa18.59■□□□□ 0.57
VARS-226ENST00000483275 NBPF10Q6P3W6 841 aaKnown RBP18.59■□□□□ 0.57
VARS-226ENST00000483275 NBPF15Q8N660 670 aa18.59■□□□□ 0.57
VARS-226ENST00000483275 MIS18AQ9NYP9 233 aa18.59■□□□□ 0.57
VARS-226ENST00000483275 SRGNP10124 158 aa18.58■□□□□ 0.56
VARS-226ENST00000483275 NBPF5PQ86XG9 351 aaPredicted RBP18.58■□□□□ 0.56
VARS-226ENST00000483275 RTF1Q92541 710 aaKnown RBP18.58■□□□□ 0.56
VARS-226ENST00000483275 TAOK3Q9H2K8 898 aa18.58■□□□□ 0.56
VARS-226ENST00000483275 NUDCQ9Y266 331 aa18.58■□□□□ 0.56
VARS-226ENST00000483275 POTEIP0CG38 1075 aa18.57■□□□□ 0.56
VARS-226ENST00000483275 POTEJP0CG39 1038 aa18.57■□□□□ 0.56
VARS-226ENST00000483275 OLFM4Q6UX06 510 aa18.57■□□□□ 0.56
VARS-226ENST00000483275 JMYQ8N9B5 988 aa18.57■□□□□ 0.56
VARS-226ENST00000483275 NUP98P52948 1817 aa18.56■□□□□ 0.56
VARS-226ENST00000483275 SNRPA1P09661 255 aaKnown RBP18.56■□□□□ 0.56
VARS-226ENST00000483275 COL13A1Q5TAT6 717 aaPredicted RBP18.56■□□□□ 0.56
VARS-226ENST00000483275 STYK1Q6J9G0 422 aa18.56■□□□□ 0.56
VARS-226ENST00000483275 CNKSR1Q969H4 720 aa18.55■□□□□ 0.56
VARS-226ENST00000483275 LTBP3Q9NS15 1303 aa18.54■□□□□ 0.56
VARS-226ENST00000483275 DDNO94850 711 aaPredicted RBP18.54■□□□□ 0.56
VARS-226ENST00000483275 HLFQ16534 295 aa18.54■□□□□ 0.56
VARS-226ENST00000483275 NGEFQ8N5V2 710 aa18.54■□□□□ 0.56
VARS-226ENST00000483275 MASTLQ96GX5 879 aa18.54■□□□□ 0.56
VARS-226ENST00000483275 PDZRN3Q9UPQ7 1066 aa18.54■□□□□ 0.56
VARS-226ENST00000483275 NIP7Q9Y221 180 aaKnown RBP eCLIP18.54■□□□□ 0.56
VARS-226ENST00000483275 THUMPD2Q9BTF0 503 aaKnown RBP18.53■□□□□ 0.56
VARS-226ENST00000483275 ABCC12Q96J65 1359 aa18.53■□□□□ 0.56
VARS-226ENST00000483275 DPY19L2Q6NUT2 758 aa18.52■□□□□ 0.56
VARS-226ENST00000483275 ZNF652Q9Y2D9 606 aa18.52■□□□□ 0.56
VARS-226ENST00000483275 SLC51AQ86UW1 340 aa18.51■□□□□ 0.55
VARS-226ENST00000483275 ZNF277Q9NRM2 450 aaPredicted RBP18.51■□□□□ 0.55
VARS-226ENST00000483275 ZNF541Q9H0D2 1346 aa18.5■□□□□ 0.55
VARS-226ENST00000483275 CAPN15O75808 1086 aa18.5■□□□□ 0.55
VARS-226ENST00000483275 CLEC4GQ6UXB4 293 aa18.5■□□□□ 0.55
VARS-226ENST00000483275 C7orf43Q8WVR3 580 aa18.5■□□□□ 0.55
VARS-226ENST00000483275 SCN4AP35499 1836 aa18.5■□□□□ 0.55
VARS-226ENST00000483275 NPR1P16066 1061 aa18.49■□□□□ 0.55
VARS-226ENST00000483275 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
VARS-226ENST00000483275 CCDC93Q567U6 631 aa18.49■□□□□ 0.55
VARS-226ENST00000483275 HSPA1AP0DMV8 641 aaKnown RBP18.48■□□□□ 0.55
VARS-226ENST00000483275 HSPA1BP0DMV9 641 aaKnown RBP18.48■□□□□ 0.55
VARS-226ENST00000483275 NUTM1Q86Y26 1132 aa18.48■□□□□ 0.55
VARS-226ENST00000483275 COL4A5P29400 1685 aa18.47■□□□□ 0.55
VARS-226ENST00000483275 SOGA3Q5TF21 947 aa18.47■□□□□ 0.55
VARS-226ENST00000483275 CHADLQ6NUI6 762 aa18.47■□□□□ 0.55
VARS-226ENST00000483275 TPTE2Q6XPS3 522 aa18.47■□□□□ 0.55
VARS-226ENST00000483275 MKRN1Q9UHC7 482 aaKnown RBP18.47■□□□□ 0.55
VARS-226ENST00000483275 HTATSF1O43719 755 aaKnown RBP18.46■□□□□ 0.55
VARS-226ENST00000483275 MYL6BP14649 208 aa18.46■□□□□ 0.55
VARS-226ENST00000483275 GPTP24298 496 aa18.46■□□□□ 0.55
VARS-226ENST00000483275 TTLL7Q6ZT98 887 aa18.46■□□□□ 0.55
VARS-226ENST00000483275 RRP7AQ9Y3A4 280 aaKnown RBP18.46■□□□□ 0.55
VARS-226ENST00000483275 ADAMTSL1Q8N6G6 1762 aa18.45■□□□□ 0.54
VARS-226ENST00000483275 KLRG2A4D1S0 409 aaPredicted RBP18.45■□□□□ 0.54
VARS-226ENST00000483275 GTF2E1P29083 439 aaPredicted RBP18.45■□□□□ 0.54
VARS-226ENST00000483275 FKBP4Q02790 459 aaKnown RBP eCLIP18.45■□□□□ 0.54
VARS-226ENST00000483275 ZBTB3Q9H5J0 574 aa18.45■□□□□ 0.54
VARS-226ENST00000483275 UBN2Q6ZU65 1347 aa18.45■□□□□ 0.54
VARS-226ENST00000483275 SNED1Q8TER0 1413 aa18.44■□□□□ 0.54
VARS-226ENST00000483275 EAPPQ56P03 285 aaPredicted RBP18.44■□□□□ 0.54
VARS-226ENST00000483275 PLEKHF1Q96S99 279 aa18.44■□□□□ 0.54
VARS-226ENST00000483275 EIF4A1P60842 406 aaKnown RBP18.43■□□□□ 0.54
VARS-226ENST00000483275 NFE2L2Q16236 605 aa18.43■□□□□ 0.54
VARS-226ENST00000483275 TNS4Q8IZW8 715 aa18.43■□□□□ 0.54
VARS-226ENST00000483275 TAF1DQ9H5J8 278 aaPredicted RBP18.43■□□□□ 0.54
VARS-226ENST00000483275 MAP3K15Q6ZN16 1313 aa18.43■□□□□ 0.54
VARS-226ENST00000483275 LTBP1Q14766 1721 aa18.43■□□□□ 0.54
VARS-226ENST00000483275 LAMB2P55268 1798 aa18.42■□□□□ 0.54
VARS-226ENST00000483275 L3MBTL3Q96JM7 780 aaPredicted RBP18.42■□□□□ 0.54
VARS-226ENST00000483275 RNF123Q5XPI4 1314 aa18.42■□□□□ 0.54
VARS-226ENST00000483275 ANKRD36CQ5JPF3 1778 aa18.41■□□□□ 0.54
VARS-226ENST00000483275 TCERG1O14776 1098 aaKnown RBP18.41■□□□□ 0.54
VARS-226ENST00000483275 NEFMP07197 916 aa18.41■□□□□ 0.54
VARS-226ENST00000483275 IARSP41252 1262 aaKnown RBP18.41■□□□□ 0.54
VARS-226ENST00000483275 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
VARS-226ENST00000483275 C3orf67Q6ZVT6 689 aa18.41■□□□□ 0.54
VARS-226ENST00000483275 SYNE4Q8N205 404 aa18.41■□□□□ 0.54
VARS-226ENST00000483275 CREBZFQ9NS37 354 aa18.41■□□□□ 0.54
VARS-226ENST00000483275 IQCA1LA6NCM1 817 aa18.4■□□□□ 0.54
VARS-226ENST00000483275 CRY2Q49AN0 593 aa18.4■□□□□ 0.54
VARS-226ENST00000483275 LDHDQ86WU2 507 aa18.4■□□□□ 0.54
VARS-226ENST00000483275 RGL2O15211 777 aa18.39■□□□□ 0.53
VARS-226ENST00000483275 ANXA1P04083 346 aa18.39■□□□□ 0.53
VARS-226ENST00000483275 SUSD4Q5VX71 490 aa18.39■□□□□ 0.53
VARS-226ENST00000483275 RTKN2Q8IZC4 609 aa18.39■□□□□ 0.53
VARS-226ENST00000483275 PASKQ96RG2 1323 aa18.39■□□□□ 0.53
VARS-226ENST00000483275 MAPK8IP3Q9UPT6 1336 aa18.39■□□□□ 0.53
VARS-226ENST00000483275 TAF1P21675 1872 aa18.38■□□□□ 0.53
VARS-226ENST00000483275 ERVV-1B6SEH8 477 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms