RNA–Protein interactions for RNA: ENST00000483062.5

SYN3-212, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-212ENST00000483062 REM2Q8IYK8 340 aaPredicted RBP10.77□□□□□ -0.69
SYN3-212ENST00000483062 VSIG10Q8N0Z9 540 aa10.77□□□□□ -0.69
SYN3-212ENST00000483062 ZNF622Q969S3 477 aaKnown RBP eCLIP10.77□□□□□ -0.69
SYN3-212ENST00000483062 LGR6Q9HBX8 967 aa10.77□□□□□ -0.69
SYN3-212ENST00000483062 FER1L6Q2WGJ9 1857 aa10.76□□□□□ -0.69
SYN3-212ENST00000483062 SRGNP10124 158 aa10.76□□□□□ -0.69
SYN3-212ENST00000483062 SLC39A6Q13433 755 aa10.76□□□□□ -0.69
SYN3-212ENST00000483062 STYK1Q6J9G0 422 aa10.76□□□□□ -0.69
SYN3-212ENST00000483062 MRC1P22897 1456 aa10.75□□□□□ -0.69
SYN3-212ENST00000483062 SCN11AQ9UI33 1791 aa10.75□□□□□ -0.69
SYN3-212ENST00000483062 TNRC18O15417 2968 aaPredicted RBP10.75□□□□□ -0.69
SYN3-212ENST00000483062 TNNT2P45379 298 aaPredicted RBP10.75□□□□□ -0.69
SYN3-212ENST00000483062 AKAP4Q5JQC9 854 aa10.75□□□□□ -0.69
SYN3-212ENST00000483062 PRPF40BQ6NWY9 871 aaKnown RBP10.75□□□□□ -0.69
SYN3-212ENST00000483062 CNTROBQ8N137 903 aa10.75□□□□□ -0.69
SYN3-212ENST00000483062 CNKSR1Q969H4 720 aa10.75□□□□□ -0.69
SYN3-212ENST00000483062 DICER1Q9UPY3 1922 aaKnown RBP10.75□□□□□ -0.69
SYN3-212ENST00000483062 ADAMTSL1Q8N6G6 1762 aa10.75□□□□□ -0.69
SYN3-212ENST00000483062 CCDC88AQ3V6T2 1871 aa10.74□□□□□ -0.69
SYN3-212ENST00000483062 CCDC85CA6NKD9 419 aa10.74□□□□□ -0.69
SYN3-212ENST00000483062 RNMTO43148 476 aaKnown RBP10.74□□□□□ -0.69
SYN3-212ENST00000483062 EPHX2P34913 555 aa10.74□□□□□ -0.69
SYN3-212ENST00000483062 SOGA3Q5TF21 947 aa10.74□□□□□ -0.69
SYN3-212ENST00000483062 SULT6B1Q6IMI4 303 aa10.74□□□□□ -0.69
SYN3-212ENST00000483062 BICDL1Q6ZP65 573 aa10.74□□□□□ -0.69
SYN3-212ENST00000483062 CCDC24Q8N4L8 307 aa10.74□□□□□ -0.69
SYN3-212ENST00000483062 HACL1Q9UJ83 578 aa10.74□□□□□ -0.69
SYN3-212ENST00000483062 ZNF541Q9H0D2 1346 aa10.74□□□□□ -0.69
SYN3-212ENST00000483062 ANKRD31Q8N7Z5 1873 aa10.73□□□□□ -0.69
SYN3-212ENST00000483062 KLRG2A4D1S0 409 aaPredicted RBP10.73□□□□□ -0.69
SYN3-212ENST00000483062 FZD9O00144 591 aa10.73□□□□□ -0.69
SYN3-212ENST00000483062 CANXP27824 592 aaKnown RBP10.73□□□□□ -0.69
SYN3-212ENST00000483062 IL13P35225 146 aa10.73□□□□□ -0.69
SYN3-212ENST00000483062 MAP1SQ66K74 1059 aaPredicted RBP10.73□□□□□ -0.69
SYN3-212ENST00000483062 PNMA8AQ86V59 439 aaPredicted RBP10.73□□□□□ -0.69
SYN3-212ENST00000483062 A0A087WZG4 1122 aa10.72□□□□□ -0.69
SYN3-212ENST00000483062 EIF4G2P78344 907 aaKnown RBP eCLIP10.72□□□□□ -0.69
SYN3-212ENST00000483062 EAPPQ56P03 285 aaPredicted RBP10.72□□□□□ -0.69
SYN3-212ENST00000483062 MASTLQ96GX5 879 aa10.72□□□□□ -0.69
SYN3-212ENST00000483062 DDX21Q9NR30 783 aaKnown RBP eCLIP10.72□□□□□ -0.69
SYN3-212ENST00000483062 SCN4AP35499 1836 aa10.72□□□□□ -0.69
SYN3-212ENST00000483062 CAMTA2O94983 1202 aa10.71□□□□□ -0.69
SYN3-212ENST00000483062 HSPA5P11021 654 aaKnown RBP10.71□□□□□ -0.69
SYN3-212ENST00000483062 COL11A2P13942 1736 aaPredicted RBP10.71□□□□□ -0.69
SYN3-212ENST00000483062 FKBP4Q02790 459 aaKnown RBP eCLIP10.71□□□□□ -0.69
SYN3-212ENST00000483062 CST9Q5W186 159 aa10.71□□□□□ -0.69
SYN3-212ENST00000483062 SLX4Q8IY92 1834 aa10.71□□□□□ -0.69
SYN3-212ENST00000483062 CAPNS2Q96L46 248 aa10.71□□□□□ -0.69
SYN3-212ENST00000483062 THSD7BQ9C0I4 1608 aa10.71□□□□□ -0.69
SYN3-212ENST00000483062 SNED1Q8TER0 1413 aa10.7□□□□□ -0.7
SYN3-212ENST00000483062 STARD3NLO95772 234 aa10.7□□□□□ -0.7
SYN3-212ENST00000483062 FMR1Q06787 632 aaKnown RBP eCLIP10.7□□□□□ -0.7
SYN3-212ENST00000483062 CCDC93Q567U6 631 aa10.7□□□□□ -0.7
SYN3-212ENST00000483062 CNBD1Q8NA66 436 aa10.7□□□□□ -0.7
SYN3-212ENST00000483062 GPR101Q96P66 508 aaPredicted RBP10.7□□□□□ -0.7
SYN3-212ENST00000483062 ZNF277Q9NRM2 450 aaPredicted RBP10.7□□□□□ -0.7
SYN3-212ENST00000483062 TBC1D2BQ9UPU7 963 aa10.7□□□□□ -0.7
SYN3-212ENST00000483062 SSUH2Q9Y2M2 353 aa10.7□□□□□ -0.7
SYN3-212ENST00000483062 RNF123Q5XPI4 1314 aa10.69□□□□□ -0.7
SYN3-212ENST00000483062 MAP2K2P36507 400 aa10.69□□□□□ -0.7
SYN3-212ENST00000483062 IL6STP40189 918 aaPredicted RBP10.69□□□□□ -0.7
SYN3-212ENST00000483062 OLFM4Q6UX06 510 aa10.69□□□□□ -0.7
SYN3-212ENST00000483062 GPC2Q8N158 579 aa10.69□□□□□ -0.7
SYN3-212ENST00000483062 ZNF496Q96IT1 587 aaPredicted RBP10.69□□□□□ -0.7
SYN3-212ENST00000483062 SETDB2Q96T68 719 aa10.69□□□□□ -0.7
SYN3-212ENST00000483062 MCOLN1Q9GZU1 580 aa10.69□□□□□ -0.7
SYN3-212ENST00000483062 ABT1Q9ULW3 272 aaKnown RBP10.69□□□□□ -0.7
SYN3-212ENST00000483062 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
SYN3-212ENST00000483062 PDE4DIPQ5VU43 2346 aa10.68□□□□□ -0.7
SYN3-212ENST00000483062 NPR1P16066 1061 aa10.68□□□□□ -0.7
SYN3-212ENST00000483062 ECE1P42892 770 aa10.68□□□□□ -0.7
SYN3-212ENST00000483062 CYP4F22Q6NT55 531 aa10.68□□□□□ -0.7
SYN3-212ENST00000483062 PIP4P2Q8N4L2 257 aa10.68□□□□□ -0.7
SYN3-212ENST00000483062 PANK3Q9H999 370 aa10.68□□□□□ -0.7
SYN3-212ENST00000483062 TLL2Q9Y6L7 1015 aa10.68□□□□□ -0.7
SYN3-212ENST00000483062 IARSP41252 1262 aaKnown RBP10.67□□□□□ -0.7
SYN3-212ENST00000483062 MTHFSDQ2M296 383 aaKnown RBP10.67□□□□□ -0.7
SYN3-212ENST00000483062 RTKN2Q8IZC4 609 aa10.67□□□□□ -0.7
SYN3-212ENST00000483062 POLR3GLQ9BT43 218 aa10.67□□□□□ -0.7
SYN3-212ENST00000483062 TEX13AQ9BXU3 409 aaPredicted RBP10.67□□□□□ -0.7
SYN3-212ENST00000483062 UBR2Q8IWV8 1755 aa10.67□□□□□ -0.7
SYN3-212ENST00000483062 HEG1Q9ULI3 1381 aa10.66□□□□□ -0.7
SYN3-212ENST00000483062 CA12O43570 354 aa10.66□□□□□ -0.7
SYN3-212ENST00000483062 A1BGP04217 495 aa10.66□□□□□ -0.7
SYN3-212ENST00000483062 SCNN1DP51172 638 aa10.66□□□□□ -0.7
SYN3-212ENST00000483062 ST5P78524 1137 aa10.66□□□□□ -0.7
SYN3-212ENST00000483062 ZNF790Q6PG37 636 aa10.66□□□□□ -0.7
SYN3-212ENST00000483062 CLEC4GQ6UXB4 293 aa10.66□□□□□ -0.7
SYN3-212ENST00000483062 SYNE4Q8N205 404 aa10.66□□□□□ -0.7
SYN3-212ENST00000483062 PSMD1Q99460 953 aa10.66□□□□□ -0.7
SYN3-212ENST00000483062 TSKSQ9UJT2 592 aa10.66□□□□□ -0.7
SYN3-212ENST00000483062 SIPA1L3O60292 1781 aaPredicted RBP10.65□□□□□ -0.7
SYN3-212ENST00000483062 LTBP1Q14766 1721 aa10.65□□□□□ -0.7
SYN3-212ENST00000483062 TRAF5O00463 557 aa10.65□□□□□ -0.7
SYN3-212ENST00000483062 AOC2O75106 756 aa10.65□□□□□ -0.7
SYN3-212ENST00000483062 EPS15P42566 896 aa10.65□□□□□ -0.7
SYN3-212ENST00000483062 SAPCD2Q86UD0 394 aa10.65□□□□□ -0.7
SYN3-212ENST00000483062 IL17REQ8NFR9 667 aa10.65□□□□□ -0.7
SYN3-212ENST00000483062 HHIPL1Q96JK4 782 aa10.65□□□□□ -0.7
SYN3-212ENST00000483062 BEGAINQ9BUH8 593 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms