RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 TSPY26PQ9H489 355 aa18.38■□□□□ 0.53
DDR1-244ENST00000482873 MPNDQ8N594 471 aa18.37■□□□□ 0.53
DDR1-244ENST00000482873 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.37■□□□□ 0.53
DDR1-244ENST00000482873 KRT28Q7Z3Y7 464 aa18.37■□□□□ 0.53
DDR1-244ENST00000482873 SIL1Q9H173 461 aa18.37■□□□□ 0.53
DDR1-244ENST00000482873 GDPD2Q9HCC8 539 aa18.37■□□□□ 0.53
DDR1-244ENST00000482873 RGPD2P0DJD1 1756 aa18.36■□□□□ 0.53
DDR1-244ENST00000482873 KLHDC4Q8TBB5 520 aa18.36■□□□□ 0.53
DDR1-244ENST00000482873 PI4K2BQ8TCG2 481 aa18.36■□□□□ 0.53
DDR1-244ENST00000482873 NLRP2Q9NX02 1062 aa18.36■□□□□ 0.53
DDR1-244ENST00000482873 ADCY9O60503 1353 aa18.36■□□□□ 0.53
DDR1-244ENST00000482873 CUL4AQ13619 759 aa18.36■□□□□ 0.53
DDR1-244ENST00000482873 MTERF4Q7Z6M4 381 aaKnown RBP18.36■□□□□ 0.53
DDR1-244ENST00000482873 FAM208AQ9UK61 1670 aaKnown RBP18.36■□□□□ 0.53
DDR1-244ENST00000482873 LTN1O94822 1766 aa18.36■□□□□ 0.53
DDR1-244ENST00000482873 GADD45BO75293 160 aaPredicted RBP18.36■□□□□ 0.53
DDR1-244ENST00000482873 GIGYF1O75420 1035 aaPredicted RBP18.36■□□□□ 0.53
DDR1-244ENST00000482873 KIAA2012Q0VF49 1180 aa18.36■□□□□ 0.53
DDR1-244ENST00000482873 STAP2Q9UGK3 403 aa18.36■□□□□ 0.53
DDR1-244ENST00000482873 MCCP23508 829 aa18.35■□□□□ 0.53
DDR1-244ENST00000482873 POLA2Q14181 598 aa18.35■□□□□ 0.53
DDR1-244ENST00000482873 CHRNA2Q15822 529 aa18.35■□□□□ 0.53
DDR1-244ENST00000482873 DBF4Q9UBU7 674 aaPredicted RBP18.35■□□□□ 0.53
DDR1-244ENST00000482873 KIF1BPQ96EK5 621 aa18.34■□□□□ 0.53
DDR1-244ENST00000482873 ZNF830Q96NB3 372 aaPredicted RBP18.34■□□□□ 0.53
DDR1-244ENST00000482873 LRRC37A3O60309 1634 aa18.33■□□□□ 0.53
DDR1-244ENST00000482873 MCM2P49736 904 aa18.33■□□□□ 0.53
DDR1-244ENST00000482873 RASEFQ8IZ41 740 aa18.33■□□□□ 0.53
DDR1-244ENST00000482873 BABAM1Q9NWV8 329 aa18.33■□□□□ 0.53
DDR1-244ENST00000482873 NFATC2IPQ8NCF5 419 aa18.33■□□□□ 0.52
DDR1-244ENST00000482873 CCDC8Q9H0W5 538 aaPredicted RBP18.32■□□□□ 0.52
DDR1-244ENST00000482873 NFAT5O94916 1531 aa18.32■□□□□ 0.52
DDR1-244ENST00000482873 DNTTIP2Q5QJE6 756 aaKnown RBP18.32■□□□□ 0.52
DDR1-244ENST00000482873 TSC1Q92574 1164 aa18.32■□□□□ 0.52
DDR1-244ENST00000482873 SYAP1Q96A49 352 aaPredicted RBP18.32■□□□□ 0.52
DDR1-244ENST00000482873 INTS4Q96HW7 963 aaKnown RBP18.32■□□□□ 0.52
DDR1-244ENST00000482873 CSB-PGBD3P0DP91 1061 aa18.31■□□□□ 0.52
DDR1-244ENST00000482873 MYRIPQ8NFW9 859 aa18.31■□□□□ 0.52
DDR1-244ENST00000482873 ADGRL3Q9HAR2 1447 aa18.31■□□□□ 0.52
DDR1-244ENST00000482873 USP48Q86UV5 1035 aa18.31■□□□□ 0.52
DDR1-244ENST00000482873 CCDC9Q9Y3X0 531 aaKnown RBP18.31■□□□□ 0.52
DDR1-244ENST00000482873 RAB11FIP3O75154 756 aa18.3■□□□□ 0.52
DDR1-244ENST00000482873 AMOTQ4VCS5 1084 aa18.3■□□□□ 0.52
DDR1-244ENST00000482873 SMAP1Q8IYB5 467 aaPredicted RBP18.3■□□□□ 0.52
DDR1-244ENST00000482873 SUCLG2Q96I99 432 aa18.3■□□□□ 0.52
DDR1-244ENST00000482873 USP25Q9UHP3 1055 aa18.3■□□□□ 0.52
DDR1-244ENST00000482873 PRDM10Q9NQV6 1147 aa18.3■□□□□ 0.52
DDR1-244ENST00000482873 TCHHQ07283 1943 aa18.3■□□□□ 0.52
DDR1-244ENST00000482873 KSR2Q6VAB6 950 aa18.29■□□□□ 0.52
DDR1-244ENST00000482873 AACSQ86V21 672 aa18.29■□□□□ 0.52
DDR1-244ENST00000482873 BICC1Q9H694 974 aaKnown RBP18.29■□□□□ 0.52
DDR1-244ENST00000482873 TAF7LQ5H9L4 462 aa18.29■□□□□ 0.52
DDR1-244ENST00000482873 RIC3Q7Z5B4 369 aa18.29■□□□□ 0.52
DDR1-244ENST00000482873 CNTROBQ8N137 903 aa18.29■□□□□ 0.52
DDR1-244ENST00000482873 CLASRPQ8N2M8 674 aaKnown RBP18.29■□□□□ 0.52
DDR1-244ENST00000482873 TLR7Q9NYK1 1049 aaKnown RBP18.29■□□□□ 0.52
DDR1-244ENST00000482873 SGSM2O43147 1006 aa18.28■□□□□ 0.52
DDR1-244ENST00000482873 C17orf53Q8N3J3 647 aaPredicted RBP18.28■□□□□ 0.52
DDR1-244ENST00000482873 PIBF1Q8WXW3 757 aa18.28■□□□□ 0.52
DDR1-244ENST00000482873 TTC12Q9H892 705 aaPredicted RBP18.28■□□□□ 0.52
DDR1-244ENST00000482873 IFIT2P09913 472 aaKnown RBP18.28■□□□□ 0.52
DDR1-244ENST00000482873 PTH1RQ03431 593 aa18.28■□□□□ 0.52
DDR1-244ENST00000482873 COL9A3Q14050 684 aaPredicted RBP18.28■□□□□ 0.52
DDR1-244ENST00000482873 KAZALD1Q96I82 304 aa18.28■□□□□ 0.52
DDR1-244ENST00000482873 CCDC94Q9BW85 323 aaPredicted RBP18.28■□□□□ 0.52
DDR1-244ENST00000482873 SNX14Q9Y5W7 946 aa18.28■□□□□ 0.52
DDR1-244ENST00000482873 NDUFB9Q9Y6M9 179 aa18.28■□□□□ 0.52
DDR1-244ENST00000482873 PHF14O94880 888 aa18.27■□□□□ 0.52
DDR1-244ENST00000482873 HSPA4P34932 840 aa18.27■□□□□ 0.52
DDR1-244ENST00000482873 ANAPC15P60006 121 aa18.27■□□□□ 0.52
DDR1-244ENST00000482873 NOLC1Q14978 699 aaKnown RBP eCLIP18.27■□□□□ 0.52
DDR1-244ENST00000482873 RAPGEF4Q8WZA2 1011 aa18.27■□□□□ 0.52
DDR1-244ENST00000482873 HSPA2P54652 639 aa18.27■□□□□ 0.52
DDR1-244ENST00000482873 ZNF710Q8N1W2 664 aa18.27■□□□□ 0.52
DDR1-244ENST00000482873 DIAPH3Q9NSV4 1193 aa18.27■□□□□ 0.52
DDR1-244ENST00000482873 COPS6Q7L5N1 327 aa18.26■□□□□ 0.51
DDR1-244ENST00000482873 EDC3Q96F86 508 aaKnown RBP18.26■□□□□ 0.51
DDR1-244ENST00000482873 USP16Q9Y5T5 823 aa18.26■□□□□ 0.51
DDR1-244ENST00000482873 CHD2O14647 1828 aaKnown RBP18.26■□□□□ 0.51
DDR1-244ENST00000482873 ADCY5O95622 1261 aa18.26■□□□□ 0.51
DDR1-244ENST00000482873 HOXB7P09629 217 aa18.26■□□□□ 0.51
DDR1-244ENST00000482873 ADCK5Q3MIX3 580 aa18.26■□□□□ 0.51
DDR1-244ENST00000482873 PRPF40BQ6NWY9 871 aaKnown RBP18.26■□□□□ 0.51
DDR1-244ENST00000482873 ZNF790Q6PG37 636 aa18.26■□□□□ 0.51
DDR1-244ENST00000482873 FAM184AQ8NB25 1140 aa18.26■□□□□ 0.51
DDR1-244ENST00000482873 XAGE3Q8WTP9 111 aa18.26■□□□□ 0.51
DDR1-244ENST00000482873 LSG1Q9H089 658 aaKnown RBP18.26■□□□□ 0.51
DDR1-244ENST00000482873 BOLA2Q9H3K6 86 aa18.26■□□□□ 0.51
DDR1-244ENST00000482873 NPHP4O75161 1426 aaPredicted RBP18.25■□□□□ 0.51
DDR1-244ENST00000482873 CASTP20810 708 aaKnown RBP18.25■□□□□ 0.51
DDR1-244ENST00000482873 AK2P54819 239 aa18.25■□□□□ 0.51
DDR1-244ENST00000482873 PDIA6Q15084 440 aa18.25■□□□□ 0.51
DDR1-244ENST00000482873 ZNF496Q96IT1 587 aaPredicted RBP18.25■□□□□ 0.51
DDR1-244ENST00000482873 FAM227BQ96M60 508 aa18.25■□□□□ 0.51
DDR1-244ENST00000482873 MYD88Q99836 296 aa18.25■□□□□ 0.51
DDR1-244ENST00000482873 ERBB3P21860 1342 aa18.25■□□□□ 0.51
DDR1-244ENST00000482873 ATP5J2-PTCD1G3V325 749 aa18.25■□□□□ 0.51
DDR1-244ENST00000482873 GRM8O00222 908 aa18.25■□□□□ 0.51
DDR1-244ENST00000482873 PTCD1O75127 700 aaKnown RBP18.25■□□□□ 0.51
DDR1-244ENST00000482873 SASH1O94885 1247 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms