RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 UNC5CLQ8IV45 518 aa13.13□□□□□ -0.31
RPGR-208ENST00000482855 IPO4Q8TEX9 1081 aaKnown RBP13.13□□□□□ -0.31
RPGR-208ENST00000482855 TTC14Q96N46 770 aa13.13□□□□□ -0.31
RPGR-208ENST00000482855 NRBP1Q9UHY1 535 aa13.13□□□□□ -0.31
RPGR-208ENST00000482855 CEP135Q66GS9 1140 aa13.12□□□□□ -0.31
RPGR-208ENST00000482855 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.12□□□□□ -0.31
RPGR-208ENST00000482855 AEBP1Q8IUX7 1158 aa13.12□□□□□ -0.31
RPGR-208ENST00000482855 ZNF592Q92610 1267 aa13.12□□□□□ -0.31
RPGR-208ENST00000482855 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
RPGR-208ENST00000482855 STAP2Q9UGK3 403 aa13.12□□□□□ -0.31
RPGR-208ENST00000482855 ZNF75DP51815 510 aa13.12□□□□□ -0.31
RPGR-208ENST00000482855 RUFY3Q7L099 469 aa13.12□□□□□ -0.31
RPGR-208ENST00000482855 IL25Q9H293 177 aa13.12□□□□□ -0.31
RPGR-208ENST00000482855 MTMR6Q9Y217 621 aa13.12□□□□□ -0.31
RPGR-208ENST00000482855 SNX14Q9Y5W7 946 aa13.12□□□□□ -0.31
RPGR-208ENST00000482855 PTPRUQ92729 1446 aa13.12□□□□□ -0.31
RPGR-208ENST00000482855 RAD50Q92878 1312 aa13.12□□□□□ -0.31
RPGR-208ENST00000482855 GJB2P29033 226 aa13.12□□□□□ -0.31
RPGR-208ENST00000482855 RTF1Q92541 710 aaKnown RBP13.12□□□□□ -0.31
RPGR-208ENST00000482855 CHL1O00533 1208 aa13.11□□□□□ -0.31
RPGR-208ENST00000482855 CAMK4Q16566 473 aa13.11□□□□□ -0.31
RPGR-208ENST00000482855 KMT5BQ4FZB7 885 aa13.11□□□□□ -0.31
RPGR-208ENST00000482855 PLA2G4DQ86XP0 818 aa13.11□□□□□ -0.31
RPGR-208ENST00000482855 CBX8Q9HC52 389 aa13.11□□□□□ -0.31
RPGR-208ENST00000482855 CALCOCO1Q9P1Z2 691 aa13.11□□□□□ -0.31
RPGR-208ENST00000482855 VPS37CA5D8V6 355 aaPredicted RBP13.11□□□□□ -0.31
RPGR-208ENST00000482855 ANO6Q4KMQ2 910 aa13.11□□□□□ -0.31
RPGR-208ENST00000482855 CHMP3Q9Y3E7 222 aa13.11□□□□□ -0.31
RPGR-208ENST00000482855 KIF1AQ12756 1690 aa13.11□□□□□ -0.31
RPGR-208ENST00000482855 ADGRL3Q9HAR2 1447 aa13.1□□□□□ -0.31
RPGR-208ENST00000482855 AOX1Q06278 1338 aa13.1□□□□□ -0.31
RPGR-208ENST00000482855 F6X3S4 739 aa13.1□□□□□ -0.31
RPGR-208ENST00000482855 CCDC83Q8IWF9 413 aa13.1□□□□□ -0.31
RPGR-208ENST00000482855 FMN2Q9NZ56 1722 aa13.1□□□□□ -0.31
RPGR-208ENST00000482855 ERICH4A6NGS2 130 aa13.1□□□□□ -0.31
RPGR-208ENST00000482855 FAM193AP78312 1265 aa13.1□□□□□ -0.31
RPGR-208ENST00000482855 BCL11BQ9C0K0 894 aaPredicted RBP13.1□□□□□ -0.31
RPGR-208ENST00000482855 TNMDQ9H2S6 317 aa13.1□□□□□ -0.31
RPGR-208ENST00000482855 CLIP2Q9UDT6 1046 aa13.1□□□□□ -0.31
RPGR-208ENST00000482855 CCDC171Q6TFL3 1326 aa13.09□□□□□ -0.31
RPGR-208ENST00000482855 KRT85P78386 507 aa13.09□□□□□ -0.31
RPGR-208ENST00000482855 ILDR1Q86SU0 546 aaPredicted RBP13.09□□□□□ -0.31
RPGR-208ENST00000482855 CACTINQ8WUQ7 758 aaKnown RBP13.09□□□□□ -0.31
RPGR-208ENST00000482855 ZNF215Q9UL58 517 aaPredicted RBP13.09□□□□□ -0.31
RPGR-208ENST00000482855 ROBO1Q9Y6N7 1651 aa13.09□□□□□ -0.31
RPGR-208ENST00000482855 CKAP2LQ8IYA6 745 aa13.09□□□□□ -0.31
RPGR-208ENST00000482855 DNAJC2Q99543 621 aaKnown RBP13.09□□□□□ -0.31
RPGR-208ENST00000482855 ATP7BP35670 1465 aa13.09□□□□□ -0.31
RPGR-208ENST00000482855 SGSM2O43147 1006 aa13.08□□□□□ -0.31
RPGR-208ENST00000482855 TOM1O60784 492 aa13.08□□□□□ -0.31
RPGR-208ENST00000482855 LIG1P18858 919 aa13.08□□□□□ -0.31
RPGR-208ENST00000482855 TTC6Q86TZ1 520 aa13.08□□□□□ -0.31
RPGR-208ENST00000482855 CREBRFQ8IUR6 639 aa13.08□□□□□ -0.31
RPGR-208ENST00000482855 TDRD7Q8NHU6 1098 aaKnown RBP13.08□□□□□ -0.31
RPGR-208ENST00000482855 PNMA6EA0A0J9YXQ4 647 aa13.08□□□□□ -0.32
RPGR-208ENST00000482855 LARGE1O95461 756 aa13.08□□□□□ -0.32
RPGR-208ENST00000482855 SLC20A2Q08357 652 aa13.08□□□□□ -0.32
RPGR-208ENST00000482855 RASEFQ8IZ41 740 aa13.08□□□□□ -0.32
RPGR-208ENST00000482855 FAM53CQ9NYF3 392 aa13.08□□□□□ -0.32
RPGR-208ENST00000482855 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.08□□□□□ -0.32
RPGR-208ENST00000482855 V9GYY5 206 aaPredicted RBP13.08□□□□□ -0.32
RPGR-208ENST00000482855 GOLGA6L4A6NEF3 574 aa13.08□□□□□ -0.32
RPGR-208ENST00000482855 GNAI3P08754 354 aa13.08□□□□□ -0.32
RPGR-208ENST00000482855 CASTP20810 708 aaKnown RBP13.08□□□□□ -0.32
RPGR-208ENST00000482855 ATP8B2P98198 1209 aa13.08□□□□□ -0.32
RPGR-208ENST00000482855 PTPN14Q15678 1187 aa13.08□□□□□ -0.32
RPGR-208ENST00000482855 FBXO38Q6PIJ6 1188 aa13.08□□□□□ -0.32
RPGR-208ENST00000482855 MCM10Q7L590 875 aa13.08□□□□□ -0.32
RPGR-208ENST00000482855 G2E3Q7L622 706 aa13.08□□□□□ -0.32
RPGR-208ENST00000482855 ERO1AQ96HE7 468 aa13.08□□□□□ -0.32
RPGR-208ENST00000482855 ELP1O95163 1332 aa13.07□□□□□ -0.32
RPGR-208ENST00000482855 ZSCAN31Q96LW9 406 aaPredicted RBP13.07□□□□□ -0.32
RPGR-208ENST00000482855 LSG1Q9H089 658 aaKnown RBP13.07□□□□□ -0.32
RPGR-208ENST00000482855 HYPKQ9NX55 129 aa13.07□□□□□ -0.32
RPGR-208ENST00000482855 MAP4K4O95819 1239 aaPredicted RBP13.07□□□□□ -0.32
RPGR-208ENST00000482855 SLFNL1Q499Z3 407 aa13.07□□□□□ -0.32
RPGR-208ENST00000482855 SH2B1Q9NRF2 756 aaPredicted RBP13.07□□□□□ -0.32
RPGR-208ENST00000482855 DACT1Q9NYF0 836 aa13.07□□□□□ -0.32
RPGR-208ENST00000482855 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
RPGR-208ENST00000482855 TMEM94Q12767 1356 aa13.06□□□□□ -0.32
RPGR-208ENST00000482855 CPA1P15085 419 aa13.06□□□□□ -0.32
RPGR-208ENST00000482855 CDC25BP30305 580 aa13.06□□□□□ -0.32
RPGR-208ENST00000482855 ZNF165P49910 485 aa13.06□□□□□ -0.32
RPGR-208ENST00000482855 ELF2Q15723 593 aa13.06□□□□□ -0.32
RPGR-208ENST00000482855 CCDC144BQ3MJ40 725 aa13.06□□□□□ -0.32
RPGR-208ENST00000482855 CCDC144CPQ8IYA2 1237 aa13.06□□□□□ -0.32
RPGR-208ENST00000482855 DDX19AQ9NUU7 478 aaKnown RBP13.06□□□□□ -0.32
RPGR-208ENST00000482855 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
RPGR-208ENST00000482855 COL22A1Q8NFW1 1626 aaPredicted RBP13.06□□□□□ -0.32
RPGR-208ENST00000482855 NEMFO60524 1076 aa13.06□□□□□ -0.32
RPGR-208ENST00000482855 DTNBO60941 627 aa13.06□□□□□ -0.32
RPGR-208ENST00000482855 RBM6P78332 1123 aaKnown RBP13.06□□□□□ -0.32
RPGR-208ENST00000482855 IL1RAPL2Q9NP60 686 aa13.06□□□□□ -0.32
RPGR-208ENST00000482855 RRS1Q15050 365 aaKnown RBP13.05□□□□□ -0.32
RPGR-208ENST00000482855 NME9Q86XW9 330 aa13.05□□□□□ -0.32
RPGR-208ENST00000482855 NUTM1Q86Y26 1132 aa13.05□□□□□ -0.32
RPGR-208ENST00000482855 LRRC8AQ8IWT6 810 aa13.05□□□□□ -0.32
RPGR-208ENST00000482855 PDRG1Q9NUG6 133 aa13.05□□□□□ -0.32
RPGR-208ENST00000482855 VPS53Q5VIR6 699 aa13.05□□□□□ -0.32
RPGR-208ENST00000482855 RNF20Q5VTR2 975 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms