RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 RARSP54136 660 aaKnown RBP25.47■■□□□ 1.67
TRAPPC12-220ENST00000482645 ALDH1L2Q3SY69 923 aa25.47■■□□□ 1.67
TRAPPC12-220ENST00000482645 CACNA1FO60840 1977 aa25.46■■□□□ 1.67
TRAPPC12-220ENST00000482645 CAMTA2O94983 1202 aa25.46■■□□□ 1.67
TRAPPC12-220ENST00000482645 FLIIQ13045 1269 aa25.46■■□□□ 1.67
TRAPPC12-220ENST00000482645 MRPL50Q8N5N7 158 aaKnown RBP25.46■■□□□ 1.67
TRAPPC12-220ENST00000482645 MAP3K15Q6ZN16 1313 aa25.45■■□□□ 1.67
TRAPPC12-220ENST00000482645 SCN7AQ01118 1682 aa25.45■■□□□ 1.66
TRAPPC12-220ENST00000482645 GYS1P13807 737 aa25.45■■□□□ 1.66
TRAPPC12-220ENST00000482645 FKBP5Q13451 457 aaPredicted RBP25.44■■□□□ 1.66
TRAPPC12-220ENST00000482645 BCORQ6W2J9 1755 aa25.44■■□□□ 1.66
TRAPPC12-220ENST00000482645 HLFQ16534 295 aa25.43■■□□□ 1.66
TRAPPC12-220ENST00000482645 BCAR3O75815 825 aa25.42■■□□□ 1.66
TRAPPC12-220ENST00000482645 DDX58O95786 925 aaKnown RBP25.42■■□□□ 1.66
TRAPPC12-220ENST00000482645 FKBP8Q14318 412 aa25.42■■□□□ 1.66
TRAPPC12-220ENST00000482645 ANKRD13DQ6ZTN6 518 aa25.42■■□□□ 1.66
TRAPPC12-220ENST00000482645 RIC3Q7Z5B4 369 aa25.42■■□□□ 1.66
TRAPPC12-220ENST00000482645 SLC16A10Q8TF71 515 aa25.42■■□□□ 1.66
TRAPPC12-220ENST00000482645 BCL2L12Q9HB09 334 aa25.42■■□□□ 1.66
TRAPPC12-220ENST00000482645 ATF5Q9Y2D1 282 aaPredicted RBP25.42■■□□□ 1.66
TRAPPC12-220ENST00000482645 ZNF652Q9Y2D9 606 aa25.42■■□□□ 1.66
TRAPPC12-220ENST00000482645 BICDL1Q6ZP65 573 aa25.42■■□□□ 1.66
TRAPPC12-220ENST00000482645 MTFR1LQ9H019 292 aa25.41■■□□□ 1.66
TRAPPC12-220ENST00000482645 ERVV-1B6SEH8 477 aa25.4■■□□□ 1.66
TRAPPC12-220ENST00000482645 PLBD2Q8NHP8 589 aa25.4■■□□□ 1.66
TRAPPC12-220ENST00000482645 PI4KAP2A4QPH2 592 aa25.39■■□□□ 1.66
TRAPPC12-220ENST00000482645 NLGN1Q8N2Q7 840 aa25.39■■□□□ 1.66
TRAPPC12-220ENST00000482645 PI4KAP1Q8N8J0 262 aa25.39■■□□□ 1.66
TRAPPC12-220ENST00000482645 ARFGEF2Q9Y6D5 1785 aa25.39■■□□□ 1.65
TRAPPC12-220ENST00000482645 NUP98P52948 1817 aa25.39■■□□□ 1.65
TRAPPC12-220ENST00000482645 TBC1D9BQ66K14 1250 aa25.38■■□□□ 1.65
TRAPPC12-220ENST00000482645 FRAT1Q92837 279 aaPredicted RBP25.38■■□□□ 1.65
TRAPPC12-220ENST00000482645 NOB1Q9ULX3 412 aaKnown RBP25.38■■□□□ 1.65
TRAPPC12-220ENST00000482645 MAP3K2Q9Y2U5 619 aa25.38■■□□□ 1.65
TRAPPC12-220ENST00000482645 GIGYF2Q6Y7W6 1299 aaKnown RBP25.37■■□□□ 1.65
TRAPPC12-220ENST00000482645 SUPT16HQ9Y5B9 1047 aaKnown RBP25.37■■□□□ 1.65
TRAPPC12-220ENST00000482645 ADCY9O60503 1353 aa25.37■■□□□ 1.65
TRAPPC12-220ENST00000482645 GPTP24298 496 aa25.37■■□□□ 1.65
TRAPPC12-220ENST00000482645 CLEC4GQ6UXB4 293 aa25.37■■□□□ 1.65
TRAPPC12-220ENST00000482645 KSR2Q6VAB6 950 aa25.37■■□□□ 1.65
TRAPPC12-220ENST00000482645 KIF16BQ96L93 1317 aa25.36■■□□□ 1.65
TRAPPC12-220ENST00000482645 F6X3S4 739 aa25.36■■□□□ 1.65
TRAPPC12-220ENST00000482645 NIP7Q9Y221 180 aaKnown RBP eCLIP25.36■■□□□ 1.65
TRAPPC12-220ENST00000482645 MMP10P09238 476 aa25.35■■□□□ 1.65
TRAPPC12-220ENST00000482645 NFIXQ14938 502 aa25.35■■□□□ 1.65
TRAPPC12-220ENST00000482645 PTPRCP08575 1304 aa25.34■■□□□ 1.65
TRAPPC12-220ENST00000482645 MYD88Q99836 296 aa25.34■■□□□ 1.65
TRAPPC12-220ENST00000482645 FAM177BA6PVY3 158 aa25.33■■□□□ 1.65
TRAPPC12-220ENST00000482645 ATP5J2-PTCD1G3V325 749 aa25.33■■□□□ 1.65
TRAPPC12-220ENST00000482645 HSP90AB3PQ58FF7 597 aa25.33■■□□□ 1.65
TRAPPC12-220ENST00000482645 SETDB2Q96T68 719 aa25.33■■□□□ 1.65
TRAPPC12-220ENST00000482645 SPON1Q9HCB6 807 aa25.33■■□□□ 1.65
TRAPPC12-220ENST00000482645 SRCAPQ6ZRS2 3230 aa25.33■■□□□ 1.65
TRAPPC12-220ENST00000482645 POLD1P28340 1107 aa25.32■■□□□ 1.64
TRAPPC12-220ENST00000482645 BRPF1P55201 1214 aaPredicted RBP25.32■■□□□ 1.64
TRAPPC12-220ENST00000482645 TCIRG1Q13488 830 aa25.32■■□□□ 1.64
TRAPPC12-220ENST00000482645 SLC4A10Q6U841 1118 aa25.32■■□□□ 1.64
TRAPPC12-220ENST00000482645 DNAAF4Q8WXU2 420 aa25.32■■□□□ 1.64
TRAPPC12-220ENST00000482645 METTL22Q9BUU2 404 aaPredicted RBP25.32■■□□□ 1.64
TRAPPC12-220ENST00000482645 PARP3Q9Y6F1 533 aa25.32■■□□□ 1.64
TRAPPC12-220ENST00000482645 ATP10DQ9P241 1426 aa25.31■■□□□ 1.64
TRAPPC12-220ENST00000482645 ANKRD36CQ5JPF3 1778 aa25.31■■□□□ 1.64
TRAPPC12-220ENST00000482645 RGL2O15211 777 aa25.31■■□□□ 1.64
TRAPPC12-220ENST00000482645 DDR1Q08345 913 aa25.31■■□□□ 1.64
TRAPPC12-220ENST00000482645 NEXNQ0ZGT2 675 aa25.31■■□□□ 1.64
TRAPPC12-220ENST00000482645 UBN2Q6ZU65 1347 aa25.3■■□□□ 1.64
TRAPPC12-220ENST00000482645 TM4SF1P30408 202 aa25.3■■□□□ 1.64
TRAPPC12-220ENST00000482645 RRP1P56182 461 aaKnown RBP25.3■■□□□ 1.64
TRAPPC12-220ENST00000482645 CARMIL3Q8ND23 1372 aa25.3■■□□□ 1.64
TRAPPC12-220ENST00000482645 NPHP1O15259 732 aa25.29■■□□□ 1.64
TRAPPC12-220ENST00000482645 IPO8O15397 1037 aaKnown RBP25.29■■□□□ 1.64
TRAPPC12-220ENST00000482645 POLRMTO00411 1230 aaKnown RBP25.28■■□□□ 1.64
TRAPPC12-220ENST00000482645 PTGER2P43116 358 aa25.28■■□□□ 1.64
TRAPPC12-220ENST00000482645 ZNF34Q8IZ26 560 aa25.28■■□□□ 1.64
TRAPPC12-220ENST00000482645 API5Q9BZZ5 524 aaKnown RBP25.28■■□□□ 1.64
TRAPPC12-220ENST00000482645 ZKSCAN2Q63HK3 967 aa25.27■■□□□ 1.64
TRAPPC12-220ENST00000482645 SERPINB2P05120 415 aa25.27■■□□□ 1.64
TRAPPC12-220ENST00000482645 CWF19L2Q2TBE0 894 aaKnown RBP25.27■■□□□ 1.64
TRAPPC12-220ENST00000482645 NBPF5PQ86XG9 351 aaPredicted RBP25.27■■□□□ 1.64
TRAPPC12-220ENST00000482645 CLUAP1Q96AJ1 413 aa25.27■■□□□ 1.64
TRAPPC12-220ENST00000482645 TNNQ9UQP3 1299 aa25.27■■□□□ 1.64
TRAPPC12-220ENST00000482645 COL24A1Q17RW2 1714 aa25.26■■□□□ 1.63
TRAPPC12-220ENST00000482645 PLIN1O60240 522 aa25.26■■□□□ 1.63
TRAPPC12-220ENST00000482645 TRIM27P14373 513 aa25.26■■□□□ 1.63
TRAPPC12-220ENST00000482645 ATF7IPQ6VMQ6 1270 aa25.26■■□□□ 1.63
TRAPPC12-220ENST00000482645 NLRP10Q86W26 655 aa25.26■■□□□ 1.63
TRAPPC12-220ENST00000482645 SGIP1Q9BQI5 828 aa25.26■■□□□ 1.63
TRAPPC12-220ENST00000482645 ISCA1Q9BUE6 129 aa25.26■■□□□ 1.63
TRAPPC12-220ENST00000482645 AFDNP55196 1824 aaKnown RBP25.26■■□□□ 1.63
TRAPPC12-220ENST00000482645 RNF123Q5XPI4 1314 aa25.25■■□□□ 1.63
TRAPPC12-220ENST00000482645 IGKV5-2P06315 115 aa25.25■■□□□ 1.63
TRAPPC12-220ENST00000482645 PARP10Q53GL7 1025 aa25.25■■□□□ 1.63
TRAPPC12-220ENST00000482645 SUSD4Q5VX71 490 aa25.25■■□□□ 1.63
TRAPPC12-220ENST00000482645 ARHGAP45Q92619 1136 aa25.25■■□□□ 1.63
TRAPPC12-220ENST00000482645 GTF2E1P29083 439 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC12-220ENST00000482645 KLHL34Q8N239 644 aa25.24■■□□□ 1.63
TRAPPC12-220ENST00000482645 CCDC24Q8N4L8 307 aa25.24■■□□□ 1.63
TRAPPC12-220ENST00000482645 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC12-220ENST00000482645 RTL5Q5HYW3 569 aaPredicted RBP25.23■■□□□ 1.63
TRAPPC12-220ENST00000482645 BEND3Q5T5X7 828 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms