RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 CEMIPQ8WUJ3 1361 aa18.07■□□□□ 0.48
ATG4B-220ENST00000482507 KCNQ3O43525 872 aa18.07■□□□□ 0.48
ATG4B-220ENST00000482507 NBPF7P0C2Y1 421 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-220ENST00000482507 EIF2S2P20042 333 aaKnown RBP18.07■□□□□ 0.48
ATG4B-220ENST00000482507 CARD10Q9BWT7 1032 aa18.07■□□□□ 0.48
ATG4B-220ENST00000482507 MEGF6O75095 1541 aa18.06■□□□□ 0.48
ATG4B-220ENST00000482507 AOX1Q06278 1338 aa18.06■□□□□ 0.48
ATG4B-220ENST00000482507 SURF6O75683 361 aaKnown RBP18.06■□□□□ 0.48
ATG4B-220ENST00000482507 MCCP23508 829 aa18.06■□□□□ 0.48
ATG4B-220ENST00000482507 MCM2P49736 904 aa18.06■□□□□ 0.48
ATG4B-220ENST00000482507 PI4K2BQ8TCG2 481 aa18.06■□□□□ 0.48
ATG4B-220ENST00000482507 LMO7Q8WWI1 1683 aa18.06■□□□□ 0.48
ATG4B-220ENST00000482507 EIF4A1P60842 406 aaKnown RBP18.06■□□□□ 0.48
ATG4B-220ENST00000482507 COL22A1Q8NFW1 1626 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-220ENST00000482507 RHPN1Q8TCX5 695 aa18.05■□□□□ 0.48
ATG4B-220ENST00000482507 CHPF2Q9P2E5 772 aa18.05■□□□□ 0.48
ATG4B-220ENST00000482507 NCAPD2Q15021 1401 aa18.05■□□□□ 0.48
ATG4B-220ENST00000482507 ANXA1P04083 346 aa18.04■□□□□ 0.48
ATG4B-220ENST00000482507 AMOTQ4VCS5 1084 aa18.04■□□□□ 0.48
ATG4B-220ENST00000482507 CCDC9Q9Y3X0 531 aaKnown RBP18.04■□□□□ 0.48
ATG4B-220ENST00000482507 SRGAP3O43295 1099 aa18.03■□□□□ 0.48
ATG4B-220ENST00000482507 C1orf141Q5JVX7 400 aa18.03■□□□□ 0.48
ATG4B-220ENST00000482507 BEND3Q5T5X7 828 aa18.03■□□□□ 0.48
ATG4B-220ENST00000482507 INTS4Q96HW7 963 aaKnown RBP18.03■□□□□ 0.48
ATG4B-220ENST00000482507 SYCE3A1L190 88 aa18.03■□□□□ 0.48
ATG4B-220ENST00000482507 HSPA4P34932 840 aa18.03■□□□□ 0.48
ATG4B-220ENST00000482507 DDX54Q8TDD1 881 aaKnown RBP18.03■□□□□ 0.48
ATG4B-220ENST00000482507 PI4KAP2A4QPH2 592 aa18.02■□□□□ 0.48
ATG4B-220ENST00000482507 CYP27B1O15528 508 aa18.02■□□□□ 0.48
ATG4B-220ENST00000482507 RAB11FIP3O75154 756 aa18.02■□□□□ 0.48
ATG4B-220ENST00000482507 IL2RBP14784 551 aa18.02■□□□□ 0.48
ATG4B-220ENST00000482507 AKAP4Q5JQC9 854 aa18.02■□□□□ 0.48
ATG4B-220ENST00000482507 PI4KAP1Q8N8J0 262 aa18.02■□□□□ 0.48
ATG4B-220ENST00000482507 MEX3CQ5U5Q3 659 aaKnown RBP18.01■□□□□ 0.47
ATG4B-220ENST00000482507 ZSCAN30Q86W11 494 aa18.01■□□□□ 0.47
ATG4B-220ENST00000482507 SGSM2O43147 1006 aa18.01■□□□□ 0.47
ATG4B-220ENST00000482507 FOXD4L6Q3SYB3 417 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-220ENST00000482507 LRSAM1Q6UWE0 723 aa18.01■□□□□ 0.47
ATG4B-220ENST00000482507 FOXD4L3Q6VB84 417 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-220ENST00000482507 DNAAF4Q8WXU2 420 aa18.01■□□□□ 0.47
ATG4B-220ENST00000482507 PDLIM2Q96JY6 352 aa18.01■□□□□ 0.47
ATG4B-220ENST00000482507 SPG7Q9UQ90 795 aa18.01■□□□□ 0.47
ATG4B-220ENST00000482507 LRP6O75581 1613 aa18.01■□□□□ 0.47
ATG4B-220ENST00000482507 ADCY9O60503 1353 aa18■□□□□ 0.47
ATG4B-220ENST00000482507 ANP32BQ92688 251 aaKnown RBP18■□□□□ 0.47
ATG4B-220ENST00000482507 ABCC6O95255 1503 aa18■□□□□ 0.47
ATG4B-220ENST00000482507 RASEFQ8IZ41 740 aa18■□□□□ 0.47
ATG4B-220ENST00000482507 ZCRB1Q8TBF4 217 aaKnown RBP18■□□□□ 0.47
ATG4B-220ENST00000482507 LSG1Q9H089 658 aaKnown RBP18■□□□□ 0.47
ATG4B-220ENST00000482507 SPATA31A6Q5VVP1 1343 aa18■□□□□ 0.47
ATG4B-220ENST00000482507 RAD50Q92878 1312 aa18■□□□□ 0.47
ATG4B-220ENST00000482507 KDM3BQ7LBC6 1761 aa18■□□□□ 0.47
ATG4B-220ENST00000482507 PHKG2P15735 406 aa17.99■□□□□ 0.47
ATG4B-220ENST00000482507 KIF1BPQ96EK5 621 aa17.99■□□□□ 0.47
ATG4B-220ENST00000482507 GDPD2Q9HCC8 539 aa17.99■□□□□ 0.47
ATG4B-220ENST00000482507 SNX14Q9Y5W7 946 aa17.99■□□□□ 0.47
ATG4B-220ENST00000482507 GADD45BO75293 160 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-220ENST00000482507 LARP6Q9BRS8 491 aaKnown RBP17.98■□□□□ 0.47
ATG4B-220ENST00000482507 RNMTO43148 476 aaKnown RBP17.98■□□□□ 0.47
ATG4B-220ENST00000482507 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.98■□□□□ 0.47
ATG4B-220ENST00000482507 RPAP1Q9BWH6 1393 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-220ENST00000482507 COL14A1Q05707 1796 aaKnown RBP17.97■□□□□ 0.47
ATG4B-220ENST00000482507 IFNL2Q8IZJ0 200 aa17.97■□□□□ 0.47
ATG4B-220ENST00000482507 TTC14Q96N46 770 aa17.97■□□□□ 0.47
ATG4B-220ENST00000482507 USP21Q9UK80 565 aa17.97■□□□□ 0.47
ATG4B-220ENST00000482507 EPB41L2O43491 1005 aaKnown RBP17.97■□□□□ 0.47
ATG4B-220ENST00000482507 MBD3O95983 291 aa17.97■□□□□ 0.47
ATG4B-220ENST00000482507 HOXB7P09629 217 aa17.97■□□□□ 0.47
ATG4B-220ENST00000482507 PROSER3Q2NL68 480 aa17.97■□□□□ 0.47
ATG4B-220ENST00000482507 SPATA31A1Q5TZJ5 1347 aa17.96■□□□□ 0.47
ATG4B-220ENST00000482507 CWC27Q6UX04 472 aaKnown RBP17.96■□□□□ 0.47
ATG4B-220ENST00000482507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.96■□□□□ 0.47
ATG4B-220ENST00000482507 BTBD11A6QL63 1104 aa17.96■□□□□ 0.46
ATG4B-220ENST00000482507 TEFQ10587 303 aa17.96■□□□□ 0.46
ATG4B-220ENST00000482507 PRAMEF22A3QJZ6 481 aa17.95■□□□□ 0.46
ATG4B-220ENST00000482507 CPA1P15085 419 aa17.95■□□□□ 0.46
ATG4B-220ENST00000482507 RUFY3Q7L099 469 aa17.95■□□□□ 0.46
ATG4B-220ENST00000482507 FNBP4Q8N3X1 1017 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-220ENST00000482507 NFATC2IPQ8NCF5 419 aa17.95■□□□□ 0.46
ATG4B-220ENST00000482507 SLIT2O94813 1529 aa17.95■□□□□ 0.46
ATG4B-220ENST00000482507 BCL9LQ86UU0 1499 aa17.95■□□□□ 0.46
ATG4B-220ENST00000482507 OVOS2A0A0G2JMS6 1433 aa17.95■□□□□ 0.46
ATG4B-220ENST00000482507 USP42Q9H9J4 1324 aaKnown RBP17.95■□□□□ 0.46
ATG4B-220ENST00000482507 USP48Q86UV5 1035 aa17.94■□□□□ 0.46
ATG4B-220ENST00000482507 CNTROBQ8N137 903 aa17.94■□□□□ 0.46
ATG4B-220ENST00000482507 RNF214Q8ND24 703 aa17.94■□□□□ 0.46
ATG4B-220ENST00000482507 AK2P54819 239 aa17.94■□□□□ 0.46
ATG4B-220ENST00000482507 FAM98CQ17RN3 349 aaKnown RBP17.94■□□□□ 0.46
ATG4B-220ENST00000482507 SPATA31A5Q5VU36 1347 aa17.94■□□□□ 0.46
ATG4B-220ENST00000482507 SPATA31A7Q8IWB4 1347 aa17.94■□□□□ 0.46
ATG4B-220ENST00000482507 DTNBO60941 627 aa17.93■□□□□ 0.46
ATG4B-220ENST00000482507 PA2G4Q9UQ80 394 aaKnown RBP17.93■□□□□ 0.46
ATG4B-220ENST00000482507 HS1BP3Q53T59 392 aa17.93■□□□□ 0.46
ATG4B-220ENST00000482507 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-220ENST00000482507 LARGE1O95461 756 aa17.92■□□□□ 0.46
ATG4B-220ENST00000482507 PTH1RQ03431 593 aa17.92■□□□□ 0.46
ATG4B-220ENST00000482507 MTX1Q13505 466 aa17.92■□□□□ 0.46
ATG4B-220ENST00000482507 NOL7Q9UMY1 257 aaKnown RBP17.92■□□□□ 0.46
ATG4B-220ENST00000482507 MAP3K2Q9Y2U5 619 aa17.92■□□□□ 0.46
ATG4B-220ENST00000482507 AFF2P51816 1311 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms