RNA–Protein interactions for RNA: ENST00000482420.1

TMEM139-208, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-208ENST00000482420 CACNA1SQ13698 1873 aa25.35■■□□□ 1.65
TMEM139-208ENST00000482420 VEGFAP15692 232 aaPredicted RBP25.35■■□□□ 1.65
TMEM139-208ENST00000482420 NBPF5PQ86XG9 351 aaPredicted RBP25.34■■□□□ 1.65
TMEM139-208ENST00000482420 ERFEQ4G0M1 354 aa25.33■■□□□ 1.65
TMEM139-208ENST00000482420 PRPF40BQ6NWY9 871 aaKnown RBP25.33■■□□□ 1.65
TMEM139-208ENST00000482420 KLRG1Q96E93 195 aa25.33■■□□□ 1.65
TMEM139-208ENST00000482420 MIS18AQ9NYP9 233 aa25.33■■□□□ 1.65
TMEM139-208ENST00000482420 FER1L6Q2WGJ9 1857 aa25.32■■□□□ 1.64
TMEM139-208ENST00000482420 SRGNP10124 158 aa25.32■■□□□ 1.64
TMEM139-208ENST00000482420 CNKSR1Q969H4 720 aa25.32■■□□□ 1.64
TMEM139-208ENST00000482420 TAOK3Q9H2K8 898 aa25.32■■□□□ 1.64
TMEM139-208ENST00000482420 ZNF652Q9Y2D9 606 aa25.32■■□□□ 1.64
TMEM139-208ENST00000482420 SLX4Q8IY92 1834 aa25.32■■□□□ 1.64
TMEM139-208ENST00000482420 NBPF26B4DH59 902 aa25.31■■□□□ 1.64
TMEM139-208ENST00000482420 STYK1Q6J9G0 422 aa25.31■■□□□ 1.64
TMEM139-208ENST00000482420 NBPF10Q6P3W6 841 aaKnown RBP25.31■■□□□ 1.64
TMEM139-208ENST00000482420 NBPF15Q8N660 670 aa25.31■■□□□ 1.64
TMEM139-208ENST00000482420 MASTLQ96GX5 879 aa25.31■■□□□ 1.64
TMEM139-208ENST00000482420 HTATSF1O43719 755 aaKnown RBP25.3■■□□□ 1.64
TMEM139-208ENST00000482420 DPY19L2Q6NUT2 758 aa25.3■■□□□ 1.64
TMEM139-208ENST00000482420 CLEC4GQ6UXB4 293 aa25.3■■□□□ 1.64
TMEM139-208ENST00000482420 FAM177BA6PVY3 158 aa25.29■■□□□ 1.64
TMEM139-208ENST00000482420 TAF7Q15545 349 aaPredicted RBP25.29■■□□□ 1.64
TMEM139-208ENST00000482420 NIP7Q9Y221 180 aaKnown RBP eCLIP25.29■■□□□ 1.64
TMEM139-208ENST00000482420 ARFGEF2Q9Y6D5 1785 aa25.27■■□□□ 1.64
TMEM139-208ENST00000482420 POTECB2RU33 542 aa25.27■■□□□ 1.64
TMEM139-208ENST00000482420 NEFMP07197 916 aa25.27■■□□□ 1.64
TMEM139-208ENST00000482420 DICER1Q9UPY3 1922 aaKnown RBP25.27■■□□□ 1.64
TMEM139-208ENST00000482420 LTBP3Q9NS15 1303 aa25.26■■□□□ 1.63
TMEM139-208ENST00000482420 LAMB4A4D0S4 1761 aa25.26■■□□□ 1.63
TMEM139-208ENST00000482420 HLFQ16534 295 aa25.25■■□□□ 1.63
TMEM139-208ENST00000482420 NGEFQ8N5V2 710 aa25.25■■□□□ 1.63
TMEM139-208ENST00000482420 DLG5Q8TDM6 1919 aa25.25■■□□□ 1.63
TMEM139-208ENST00000482420 SOGA3Q5TF21 947 aa25.24■■□□□ 1.63
TMEM139-208ENST00000482420 TPTE2Q6XPS3 522 aa25.24■■□□□ 1.63
TMEM139-208ENST00000482420 THUMPD2Q9BTF0 503 aaKnown RBP25.24■■□□□ 1.63
TMEM139-208ENST00000482420 NPR1P16066 1061 aa25.23■■□□□ 1.63
TMEM139-208ENST00000482420 JMYQ8N9B5 988 aa25.23■■□□□ 1.63
TMEM139-208ENST00000482420 DDNO94850 711 aaPredicted RBP25.22■■□□□ 1.63
TMEM139-208ENST00000482420 KDM3BQ7LBC6 1761 aa25.21■■□□□ 1.63
TMEM139-208ENST00000482420 GTF2E1P29083 439 aaPredicted RBP25.21■■□□□ 1.63
TMEM139-208ENST00000482420 CCDC93Q567U6 631 aa25.21■■□□□ 1.63
TMEM139-208ENST00000482420 OLFM4Q6UX06 510 aa25.21■■□□□ 1.63
TMEM139-208ENST00000482420 PLEKHF1Q96S99 279 aa25.21■■□□□ 1.63
TMEM139-208ENST00000482420 C7orf43Q8WVR3 580 aa25.2■■□□□ 1.62
TMEM139-208ENST00000482420 NFE2L2Q16236 605 aa25.19■■□□□ 1.62
TMEM139-208ENST00000482420 PNISRQ8TF01 805 aaKnown RBP25.19■■□□□ 1.62
TMEM139-208ENST00000482420 KLRG2A4D1S0 409 aaPredicted RBP25.18■■□□□ 1.62
TMEM139-208ENST00000482420 RGL2O15211 777 aa25.18■■□□□ 1.62
TMEM139-208ENST00000482420 POTEIP0CG38 1075 aa25.18■■□□□ 1.62
TMEM139-208ENST00000482420 POTEJP0CG39 1038 aa25.18■■□□□ 1.62
TMEM139-208ENST00000482420 RRP7AQ9Y3A4 280 aaKnown RBP25.18■■□□□ 1.62
TMEM139-208ENST00000482420 MAPK8IP3Q9UPT6 1336 aa25.17■■□□□ 1.62
TMEM139-208ENST00000482420 MYL6BP14649 208 aa25.17■■□□□ 1.62
TMEM139-208ENST00000482420 EIF4A1P60842 406 aaKnown RBP25.17■■□□□ 1.62
TMEM139-208ENST00000482420 NUTM1Q86Y26 1132 aa25.17■■□□□ 1.62
TMEM139-208ENST00000482420 ZNF277Q9NRM2 450 aaPredicted RBP25.17■■□□□ 1.62
TMEM139-208ENST00000482420 ABCC12Q96J65 1359 aa25.16■■□□□ 1.62
TMEM139-208ENST00000482420 PCNTO95613 3336 aa25.15■■□□□ 1.62
TMEM139-208ENST00000482420 FKBP4Q02790 459 aaKnown RBP eCLIP25.15■■□□□ 1.62
TMEM139-208ENST00000482420 KIF6Q6ZMV9 814 aa25.15■■□□□ 1.62
TMEM139-208ENST00000482420 TTLL7Q6ZT98 887 aa25.15■■□□□ 1.62
TMEM139-208ENST00000482420 MAP3K15Q6ZN16 1313 aa25.14■■□□□ 1.62
TMEM139-208ENST00000482420 GPTP24298 496 aa25.14■■□□□ 1.62
TMEM139-208ENST00000482420 COL13A1Q5TAT6 717 aaPredicted RBP25.14■■□□□ 1.62
TMEM139-208ENST00000482420 CHADLQ6NUI6 762 aa25.14■■□□□ 1.62
TMEM139-208ENST00000482420 ZBTB3Q9H5J0 574 aa25.14■■□□□ 1.62
TMEM139-208ENST00000482420 ERVV-1B6SEH8 477 aa25.13■■□□□ 1.61
TMEM139-208ENST00000482420 ZNF541Q9H0D2 1346 aa25.12■■□□□ 1.61
TMEM139-208ENST00000482420 NUP98P52948 1817 aa25.12■■□□□ 1.61
TMEM139-208ENST00000482420 ALDH1B1P30837 517 aa25.12■■□□□ 1.61
TMEM139-208ENST00000482420 RTKN2Q8IZC4 609 aa25.12■■□□□ 1.61
TMEM139-208ENST00000482420 NYXQ9GZU5 481 aa25.12■■□□□ 1.61
TMEM139-208ENST00000482420 IQCA1LA6NCM1 817 aa25.11■■□□□ 1.61
TMEM139-208ENST00000482420 PNNQ9H307 717 aaKnown RBP25.11■■□□□ 1.61
TMEM139-208ENST00000482420 UBN2Q6ZU65 1347 aa25.11■■□□□ 1.61
TMEM139-208ENST00000482420 TSPYL4Q9UJ04 414 aa25.1■■□□□ 1.61
TMEM139-208ENST00000482420 CRY2Q49AN0 593 aa25.09■■□□□ 1.61
TMEM139-208ENST00000482420 SYNE4Q8N205 404 aa25.09■■□□□ 1.61
TMEM139-208ENST00000482420 L3MBTL3Q96JM7 780 aaPredicted RBP25.09■■□□□ 1.61
TMEM139-208ENST00000482420 HSPA1AP0DMV8 641 aaKnown RBP25.08■■□□□ 1.61
TMEM139-208ENST00000482420 HSPA1BP0DMV9 641 aaKnown RBP25.08■■□□□ 1.61
TMEM139-208ENST00000482420 IARSP41252 1262 aaKnown RBP25.08■■□□□ 1.61
TMEM139-208ENST00000482420 EAPPQ56P03 285 aaPredicted RBP25.08■■□□□ 1.61
TMEM139-208ENST00000482420 RPGRQ92834 1020 aaKnown RBP25.08■■□□□ 1.61
TMEM139-208ENST00000482420 TAF1DQ9H5J8 278 aaPredicted RBP25.08■■□□□ 1.61
TMEM139-208ENST00000482420 SUSD4Q5VX71 490 aa25.07■■□□□ 1.6
TMEM139-208ENST00000482420 LDHDQ86WU2 507 aa25.07■■□□□ 1.6
TMEM139-208ENST00000482420 SCN4AP35499 1836 aa25.07■■□□□ 1.6
TMEM139-208ENST00000482420 EIF2S2P20042 333 aaKnown RBP25.06■■□□□ 1.6
TMEM139-208ENST00000482420 RIPK4P57078 832 aa25.06■■□□□ 1.6
TMEM139-208ENST00000482420 CREBZFQ9NS37 354 aa25.06■■□□□ 1.6
TMEM139-208ENST00000482420 MKRN1Q9UHC7 482 aaKnown RBP25.06■■□□□ 1.6
TMEM139-208ENST00000482420 SLC51AQ86UW1 340 aa25.05■■□□□ 1.6
TMEM139-208ENST00000482420 RNF123Q5XPI4 1314 aa25.05■■□□□ 1.6
TMEM139-208ENST00000482420 IBTKQ9P2D0 1353 aaPredicted RBP25.05■■□□□ 1.6
TMEM139-208ENST00000482420 TCERG1O14776 1098 aaKnown RBP25.04■■□□□ 1.6
TMEM139-208ENST00000482420 ZNF34Q8IZ26 560 aa25.04■■□□□ 1.6
TMEM139-208ENST00000482420 HACL1Q9UJ83 578 aa25.04■■□□□ 1.6
TMEM139-208ENST00000482420 SNED1Q8TER0 1413 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms