RNA–Protein interactions for RNA: ENST00000482143.5

TSPAN1-207, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-207ENST00000482143 KIF7Q2M1P5 1343 aa17.47■□□□□ 0.39
TSPAN1-207ENST00000482143 PER1O15534 1290 aaPredicted RBP17.47■□□□□ 0.39
TSPAN1-207ENST00000482143 RNMTO43148 476 aaKnown RBP17.47■□□□□ 0.39
TSPAN1-207ENST00000482143 MAP2K1Q02750 393 aaPredicted RBP17.47■□□□□ 0.39
TSPAN1-207ENST00000482143 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
TSPAN1-207ENST00000482143 ABT1Q9ULW3 272 aaKnown RBP17.47■□□□□ 0.39
TSPAN1-207ENST00000482143 COL3A1P02461 1466 aaPredicted RBP17.46■□□□□ 0.39
TSPAN1-207ENST00000482143 MLLT1Q03111 559 aaPredicted RBP17.46■□□□□ 0.39
TSPAN1-207ENST00000482143 DEFB115Q30KQ5 88 aa17.46■□□□□ 0.39
TSPAN1-207ENST00000482143 STYK1Q6J9G0 422 aa17.46■□□□□ 0.39
TSPAN1-207ENST00000482143 HACL1Q9UJ83 578 aa17.46■□□□□ 0.39
TSPAN1-207ENST00000482143 CCDC85CA6NKD9 419 aa17.45■□□□□ 0.38
TSPAN1-207ENST00000482143 HSPA8P11142 646 aaKnown RBP17.45■□□□□ 0.38
TSPAN1-207ENST00000482143 L3MBTL3Q96JM7 780 aaPredicted RBP17.45■□□□□ 0.38
TSPAN1-207ENST00000482143 SETDB2Q96T68 719 aa17.45■□□□□ 0.38
TSPAN1-207ENST00000482143 BEGAINQ9BUH8 593 aa17.45■□□□□ 0.38
TSPAN1-207ENST00000482143 TBC1D2BQ9UPU7 963 aa17.45■□□□□ 0.38
TSPAN1-207ENST00000482143 BCORQ6W2J9 1755 aa17.44■□□□□ 0.38
TSPAN1-207ENST00000482143 EIF5P55010 431 aaKnown RBP17.44■□□□□ 0.38
TSPAN1-207ENST00000482143 PAXIP1Q6ZW49 1069 aaPredicted RBP17.44■□□□□ 0.38
TSPAN1-207ENST00000482143 MASTLQ96GX5 879 aa17.44■□□□□ 0.38
TSPAN1-207ENST00000482143 WDR33Q9C0J8 1336 aaKnown RBP17.44■□□□□ 0.38
TSPAN1-207ENST00000482143 ITGBL1O95965 494 aaPredicted RBP17.43■□□□□ 0.38
TSPAN1-207ENST00000482143 EPHX2P34913 555 aa17.43■□□□□ 0.38
TSPAN1-207ENST00000482143 CCDC93Q567U6 631 aa17.43■□□□□ 0.38
TSPAN1-207ENST00000482143 PNMA8AQ86V59 439 aaPredicted RBP17.43■□□□□ 0.38
TSPAN1-207ENST00000482143 CFAP44Q96MT7 982 aa17.43■□□□□ 0.38
TSPAN1-207ENST00000482143 ADAMTSL1Q8N6G6 1762 aa17.43■□□□□ 0.38
TSPAN1-207ENST00000482143 RASSF10A6NK89 507 aa17.42■□□□□ 0.38
TSPAN1-207ENST00000482143 HMOX1P09601 288 aa17.42■□□□□ 0.38
TSPAN1-207ENST00000482143 SRGNP10124 158 aa17.42■□□□□ 0.38
TSPAN1-207ENST00000482143 GRM1Q13255 1194 aa17.42■□□□□ 0.38
TSPAN1-207ENST00000482143 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
TSPAN1-207ENST00000482143 ZNF541Q9H0D2 1346 aa17.42■□□□□ 0.38
TSPAN1-207ENST00000482143 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
TSPAN1-207ENST00000482143 MAP1SQ66K74 1059 aaPredicted RBP17.41■□□□□ 0.38
TSPAN1-207ENST00000482143 CNTROBQ8N137 903 aa17.41■□□□□ 0.38
TSPAN1-207ENST00000482143 RNF123Q5XPI4 1314 aa17.41■□□□□ 0.38
TSPAN1-207ENST00000482143 TEFQ10587 303 aa17.4■□□□□ 0.38
TSPAN1-207ENST00000482143 TEX13AQ9BXU3 409 aaPredicted RBP17.4■□□□□ 0.38
TSPAN1-207ENST00000482143 TRPM7Q96QT4 1865 aa17.39■□□□□ 0.38
TSPAN1-207ENST00000482143 IL6STP40189 918 aaPredicted RBP17.39■□□□□ 0.37
TSPAN1-207ENST00000482143 MTHFSDQ2M296 383 aaKnown RBP17.39■□□□□ 0.37
TSPAN1-207ENST00000482143 ZNF277Q9NRM2 450 aaPredicted RBP17.39■□□□□ 0.37
TSPAN1-207ENST00000482143 HEG1Q9ULI3 1381 aa17.39■□□□□ 0.37
TSPAN1-207ENST00000482143 ECE1P42892 770 aa17.38■□□□□ 0.37
TSPAN1-207ENST00000482143 FKBP4Q02790 459 aaKnown RBP eCLIP17.38■□□□□ 0.37
TSPAN1-207ENST00000482143 NBPF5PQ86XG9 351 aaPredicted RBP17.38■□□□□ 0.37
TSPAN1-207ENST00000482143 THSD7BQ9C0I4 1608 aa17.38■□□□□ 0.37
TSPAN1-207ENST00000482143 NPR1P16066 1061 aa17.37■□□□□ 0.37
TSPAN1-207ENST00000482143 ZNF496Q96IT1 587 aaPredicted RBP17.37■□□□□ 0.37
TSPAN1-207ENST00000482143 DIAPH1O60610 1272 aaKnown RBP17.36■□□□□ 0.37
TSPAN1-207ENST00000482143 LMOD1P29536 600 aaPredicted RBP17.36■□□□□ 0.37
TSPAN1-207ENST00000482143 ZNF790Q6PG37 636 aa17.36■□□□□ 0.37
TSPAN1-207ENST00000482143 DZIP3Q86Y13 1208 aaKnown RBP17.36■□□□□ 0.37
TSPAN1-207ENST00000482143 RTKN2Q8IZC4 609 aa17.36■□□□□ 0.37
TSPAN1-207ENST00000482143 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
TSPAN1-207ENST00000482143 GPC2Q8N158 579 aa17.35■□□□□ 0.37
TSPAN1-207ENST00000482143 JDP2Q8WYK2 163 aa17.35■□□□□ 0.37
TSPAN1-207ENST00000482143 CAPNS2Q96L46 248 aa17.35■□□□□ 0.37
TSPAN1-207ENST00000482143 DDX21Q9NR30 783 aaKnown RBP eCLIP17.35■□□□□ 0.37
TSPAN1-207ENST00000482143 ZNF652Q9Y2D9 606 aa17.35■□□□□ 0.37
TSPAN1-207ENST00000482143 GJA3Q9Y6H8 435 aa17.35■□□□□ 0.37
TSPAN1-207ENST00000482143 A1BGP04217 495 aa17.34■□□□□ 0.37
TSPAN1-207ENST00000482143 IARSP41252 1262 aaKnown RBP17.34■□□□□ 0.37
TSPAN1-207ENST00000482143 FMNL2Q96PY5 1086 aa17.34■□□□□ 0.37
TSPAN1-207ENST00000482143 CC2D1BQ5T0F9 858 aaKnown RBP17.33■□□□□ 0.36
TSPAN1-207ENST00000482143 C7orf43Q8WVR3 580 aa17.33■□□□□ 0.36
TSPAN1-207ENST00000482143 GPR101Q96P66 508 aaPredicted RBP17.33■□□□□ 0.36
TSPAN1-207ENST00000482143 EIF6P56537 245 aaKnown RBP17.32■□□□□ 0.36
TSPAN1-207ENST00000482143 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
TSPAN1-207ENST00000482143 OLFM4Q6UX06 510 aa17.32■□□□□ 0.36
TSPAN1-207ENST00000482143 TSKSQ9UJT2 592 aa17.32■□□□□ 0.36
TSPAN1-207ENST00000482143 CEMIPQ8WUJ3 1361 aa17.31■□□□□ 0.36
TSPAN1-207ENST00000482143 FAM177BA6PVY3 158 aa17.31■□□□□ 0.36
TSPAN1-207ENST00000482143 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
TSPAN1-207ENST00000482143 FZD9O00144 591 aa17.31■□□□□ 0.36
TSPAN1-207ENST00000482143 GTF2E1P29083 439 aaPredicted RBP17.31■□□□□ 0.36
TSPAN1-207ENST00000482143 ALDH1B1P30837 517 aa17.31■□□□□ 0.36
TSPAN1-207ENST00000482143 RGS19P49795 217 aa17.31■□□□□ 0.36
TSPAN1-207ENST00000482143 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
TSPAN1-207ENST00000482143 SYNE4Q8N205 404 aa17.31■□□□□ 0.36
TSPAN1-207ENST00000482143 IL17REQ8NFR9 667 aa17.31■□□□□ 0.36
TSPAN1-207ENST00000482143 CASP8AP2Q9UKL3 1982 aa17.31■□□□□ 0.36
TSPAN1-207ENST00000482143 ZEB1P37275 1124 aaPredicted RBP17.3■□□□□ 0.36
TSPAN1-207ENST00000482143 LTBP1Q14766 1721 aa17.3■□□□□ 0.36
TSPAN1-207ENST00000482143 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
TSPAN1-207ENST00000482143 CLEC4GQ6UXB4 293 aa17.29■□□□□ 0.36
TSPAN1-207ENST00000482143 NIP7Q9Y221 180 aaKnown RBP eCLIP17.29■□□□□ 0.36
TSPAN1-207ENST00000482143 GAS2L2Q8NHY3 880 aa17.28■□□□□ 0.36
TSPAN1-207ENST00000482143 BTBD11A6QL63 1104 aa17.27■□□□□ 0.36
TSPAN1-207ENST00000482143 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.36
TSPAN1-207ENST00000482143 FMR1Q06787 632 aaKnown RBP eCLIP17.27■□□□□ 0.36
TSPAN1-207ENST00000482143 CA12O43570 354 aa17.26■□□□□ 0.35
TSPAN1-207ENST00000482143 AOC2O75106 756 aa17.26■□□□□ 0.35
TSPAN1-207ENST00000482143 MAP2K2P36507 400 aa17.26■□□□□ 0.35
TSPAN1-207ENST00000482143 MCOLN1Q9GZU1 580 aa17.26■□□□□ 0.35
TSPAN1-207ENST00000482143 DLG5Q8TDM6 1919 aa17.25■□□□□ 0.35
TSPAN1-207ENST00000482143 TRAF5O00463 557 aa17.25■□□□□ 0.35
TSPAN1-207ENST00000482143 USP50Q70EL3 339 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms