RNA–Protein interactions for RNA: ENST00000481613.1

GGA1-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-219	ENST00000481613	UBR2	Q8IWV8	1755 aa		13.84	□□□□□ -0.19
GGA1-219	ENST00000481613	A1BG	P04217	495 aa		13.84	□□□□□ -0.19
GGA1-219	ENST00000481613	VEGFB	P49765	207 aa		13.84	□□□□□ -0.19
GGA1-219	ENST00000481613	ERFE	Q4G0M1	354 aa		13.84	□□□□□ -0.19
GGA1-219	ENST00000481613	DPY19L2	Q6NUT2	758 aa		13.84	□□□□□ -0.19
GGA1-219	ENST00000481613	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.84	□□□□□ -0.19
GGA1-219	ENST00000481613	ANKRD31	Q8N7Z5	1873 aa		13.84	□□□□□ -0.19
GGA1-219	ENST00000481613	CNTNAP1	P78357	1384 aa		13.83	□□□□□ -0.19
GGA1-219	ENST00000481613	RGL2	O15211	777 aa		13.83	□□□□□ -0.2
GGA1-219	ENST00000481613	KCNQ3	O43525	872 aa		13.83	□□□□□ -0.2
GGA1-219	ENST00000481613	PRR5L	Q6MZQ0	368 aa		13.83	□□□□□ -0.2
GGA1-219	ENST00000481613	BICDL1	Q6ZP65	573 aa		13.83	□□□□□ -0.2
GGA1-219	ENST00000481613	PLEKHF1	Q96S99	279 aa		13.83	□□□□□ -0.2
GGA1-219	ENST00000481613	BRIP1	Q9BX63	1249 aa		13.83	□□□□□ -0.2
GGA1-219	ENST00000481613	WBP1L	Q9NX94	342 aa		13.83	□□□□□ -0.2
GGA1-219	ENST00000481613	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.83	□□□□□ -0.2
GGA1-219	ENST00000481613	USP16	Q9Y5T5	823 aa		13.83	□□□□□ -0.2
GGA1-219	ENST00000481613	LTBP3	Q9NS15	1303 aa		13.83	□□□□□ -0.2
GGA1-219	ENST00000481613	MAPK8IP3	Q9UPT6	1336 aa		13.83	□□□□□ -0.2
GGA1-219	ENST00000481613	FER1L6	Q2WGJ9	1857 aa		13.82	□□□□□ -0.2
GGA1-219	ENST00000481613	PDE6B	P35913	854 aa		13.82	□□□□□ -0.2
GGA1-219	ENST00000481613	DCTN1	Q14203	1278 aa		13.82	□□□□□ -0.2
GGA1-219	ENST00000481613	NFE2L2	Q16236	605 aa		13.82	□□□□□ -0.2
GGA1-219	ENST00000481613	CLEC4G	Q6UXB4	293 aa		13.82	□□□□□ -0.2
GGA1-219	ENST00000481613	DZIP3	Q86Y13	1208 aa	Known RBP	13.82	□□□□□ -0.2
GGA1-219	ENST00000481613	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.82	□□□□□ -0.2	4e-7	■■■■□ 21.2
GGA1-219	ENST00000481613	SETDB2	Q96T68	719 aa		13.82	□□□□□ -0.2
GGA1-219	ENST00000481613	TBC1D2B	Q9UPU7	963 aa		13.82	□□□□□ -0.2
GGA1-219	ENST00000481613	ZNF652	Q9Y2D9	606 aa		13.82	□□□□□ -0.2
GGA1-219	ENST00000481613	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.81	□□□□□ -0.2
GGA1-219	ENST00000481613	TIAM2	Q8IVF5	1701 aa		13.81	□□□□□ -0.2
GGA1-219	ENST00000481613	SLX4	Q8IY92	1834 aa		13.8	□□□□□ -0.2
GGA1-219	ENST00000481613	DICER1	Q9UPY3	1922 aa	Known RBP	13.8	□□□□□ -0.2
GGA1-219	ENST00000481613	CAMTA2	O94983	1202 aa		13.8	□□□□□ -0.2
GGA1-219	ENST00000481613	SRGN	P10124	158 aa		13.8	□□□□□ -0.2
GGA1-219	ENST00000481613	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.8	□□□□□ -0.2
GGA1-219	ENST00000481613	SIPA1L3	O60292	1781 aa	Predicted RBP	13.8	□□□□□ -0.2
GGA1-219	ENST00000481613	NPHP1	O15259	732 aa		13.79	□□□□□ -0.2
GGA1-219	ENST00000481613	LBX1	P52954	281 aa		13.79	□□□□□ -0.2
GGA1-219	ENST00000481613	DDX10	Q13206	875 aa	Known RBP	13.79	□□□□□ -0.2
GGA1-219	ENST00000481613	VIRMA	Q69YN4	1812 aa	Known RBP	13.78	□□□□□ -0.2
GGA1-219	ENST00000481613	ST5	P78524	1137 aa		13.78	□□□□□ -0.2
GGA1-219	ENST00000481613	LMOD3	Q0VAK6	560 aa		13.78	□□□□□ -0.2
GGA1-219	ENST00000481613	OLFM4	Q6UX06	510 aa		13.78	□□□□□ -0.2
GGA1-219	ENST00000481613	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.78	□□□□□ -0.2
GGA1-219	ENST00000481613	PRAMEF22	A3QJZ6	481 aa		13.77	□□□□□ -0.21
GGA1-219	ENST00000481613	HSPA8	P11142	646 aa	Known RBP	13.77	□□□□□ -0.21
GGA1-219	ENST00000481613	COL11A2	P13942	1736 aa	Predicted RBP	13.77	□□□□□ -0.21
GGA1-219	ENST00000481613	CTCF	P49711	727 aa	Predicted RBP	13.77	□□□□□ -0.21
GGA1-219	ENST00000481613	PRPF40B	Q6NWY9	871 aa	Known RBP	13.77	□□□□□ -0.21
GGA1-219	ENST00000481613	LDHD	Q86WU2	507 aa		13.77	□□□□□ -0.21
GGA1-219	ENST00000481613	CNBD1	Q8NA66	436 aa		13.77	□□□□□ -0.21
GGA1-219	ENST00000481613	TAOK3	Q9H2K8	898 aa		13.77	□□□□□ -0.21
GGA1-219	ENST00000481613	BABAM1	Q9NWV8	329 aa		13.77	□□□□□ -0.21
GGA1-219	ENST00000481613	KLRG2	A4D1S0	409 aa	Predicted RBP	13.76	□□□□□ -0.21
GGA1-219	ENST00000481613	EIF4A1	P60842	406 aa	Known RBP	13.76	□□□□□ -0.21
GGA1-219	ENST00000481613	FMR1	Q06787	632 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
GGA1-219	ENST00000481613	STYK1	Q6J9G0	422 aa		13.76	□□□□□ -0.21
GGA1-219	ENST00000481613	MIS18A	Q9NYP9	233 aa		13.76	□□□□□ -0.21
GGA1-219	ENST00000481613	ZNF541	Q9H0D2	1346 aa		13.75	□□□□□ -0.21
GGA1-219	ENST00000481613	RASSF10	A6NK89	507 aa		13.75	□□□□□ -0.21
GGA1-219	ENST00000481613	TMEM88B	A6NKF7	163 aa		13.75	□□□□□ -0.21
GGA1-219	ENST00000481613	NBPF26	B4DH59	902 aa		13.75	□□□□□ -0.21
GGA1-219	ENST00000481613	RIPK4	P57078	832 aa		13.75	□□□□□ -0.21
GGA1-219	ENST00000481613	NBPF10	Q6P3W6	841 aa	Known RBP	13.75	□□□□□ -0.21
GGA1-219	ENST00000481613	TPTE2	Q6XPS3	522 aa		13.75	□□□□□ -0.21
GGA1-219	ENST00000481613	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.75	□□□□□ -0.21
GGA1-219	ENST00000481613	NBPF15	Q8N660	670 aa		13.75	□□□□□ -0.21
GGA1-219	ENST00000481613	CNKSR1	Q969H4	720 aa		13.75	□□□□□ -0.21
GGA1-219	ENST00000481613	ABHD8	Q96I13	439 aa		13.75	□□□□□ -0.21
GGA1-219	ENST00000481613	ERVV-1	B6SEH8	477 aa		13.74	□□□□□ -0.21
GGA1-219	ENST00000481613	PIP4K2A	P48426	406 aa	Predicted RBP	13.74	□□□□□ -0.21
GGA1-219	ENST00000481613	RGS19	P49795	217 aa		13.74	□□□□□ -0.21
GGA1-219	ENST00000481613	SOGA3	Q5TF21	947 aa		13.74	□□□□□ -0.21
GGA1-219	ENST00000481613	ADAMTSL1	Q8N6G6	1762 aa		13.73	□□□□□ -0.21
GGA1-219	ENST00000481613	ERBB4	Q15303	1308 aa		13.73	□□□□□ -0.21
GGA1-219	ENST00000481613	TMPO	P42166	694 aa	Known RBP	13.73	□□□□□ -0.21
GGA1-219	ENST00000481613	WDR43	Q15061	677 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
GGA1-219	ENST00000481613	FAM161A	Q3B820	660 aa		13.73	□□□□□ -0.21
GGA1-219	ENST00000481613	MASTL	Q96GX5	879 aa		13.73	□□□□□ -0.21
GGA1-219	ENST00000481613	TSPYL4	Q9UJ04	414 aa		13.73	□□□□□ -0.21
GGA1-219	ENST00000481613	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
GGA1-219	ENST00000481613	SCN7A	Q01118	1682 aa		13.72	□□□□□ -0.21
GGA1-219	ENST00000481613	FZD9	O00144	591 aa		13.72	□□□□□ -0.21
GGA1-219	ENST00000481613	DEFB115	Q30KQ5	88 aa		13.72	□□□□□ -0.21
GGA1-219	ENST00000481613	MAP1S	Q66K74	1059 aa	Predicted RBP	13.72	□□□□□ -0.21
GGA1-219	ENST00000481613	KIF6	Q6ZMV9	814 aa		13.72	□□□□□ -0.21
GGA1-219	ENST00000481613	CNTROB	Q8N137	903 aa		13.72	□□□□□ -0.21
GGA1-219	ENST00000481613	NYX	Q9GZU5	481 aa		13.72	□□□□□ -0.21
GGA1-219	ENST00000481613	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.72	□□□□□ -0.21
GGA1-219	ENST00000481613	SNED1	Q8TER0	1413 aa		13.72	□□□□□ -0.21
GGA1-219	ENST00000481613	CACNA1S	Q13698	1873 aa		13.72	□□□□□ -0.21
GGA1-219	ENST00000481613	SLC51A	Q86UW1	340 aa		13.71	□□□□□ -0.21
GGA1-219	ENST00000481613	RUNDC1	Q96C34	613 aa		13.71	□□□□□ -0.21
GGA1-219	ENST00000481613	THUMPD2	Q9BTF0	503 aa	Known RBP	13.71	□□□□□ -0.21
GGA1-219	ENST00000481613	RRP7A	Q9Y3A4	280 aa	Known RBP	13.71	□□□□□ -0.21
GGA1-219	ENST00000481613	MAP3K15	Q6ZN16	1313 aa		13.7	□□□□□ -0.22
GGA1-219	ENST00000481613	WDR33	Q9C0J8	1336 aa	Known RBP	13.7	□□□□□ -0.22
GGA1-219	ENST00000481613	IQCA1L	A6NCM1	817 aa		13.7	□□□□□ -0.22
GGA1-219	ENST00000481613	NPR1	P16066	1061 aa		13.7	□□□□□ -0.22

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