RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 MCM10Q7L590 875 aa12.24□□□□□ -0.45
COMMD4-203ENST00000480484 TTC21BQ7Z4L5 1316 aa12.23□□□□□ -0.45
COMMD4-203ENST00000480484 ZC3H4Q9UPT8 1303 aaKnown RBP12.23□□□□□ -0.45
COMMD4-203ENST00000480484 AATKQ6ZMQ8 1374 aa12.23□□□□□ -0.45
COMMD4-203ENST00000480484 MAFGO15525 162 aa12.23□□□□□ -0.45
COMMD4-203ENST00000480484 TPD52L2O43399 206 aaKnown RBP12.23□□□□□ -0.45
COMMD4-203ENST00000480484 SDSP20132 328 aa12.23□□□□□ -0.45
COMMD4-203ENST00000480484 TMTC2Q8N394 836 aa12.23□□□□□ -0.45
COMMD4-203ENST00000480484 IL25Q9H293 177 aa12.23□□□□□ -0.45
COMMD4-203ENST00000480484 ALDH1L2Q3SY69 923 aa12.23□□□□□ -0.45
COMMD4-203ENST00000480484 HSP90AB2PQ58FF8 381 aa12.23□□□□□ -0.45
COMMD4-203ENST00000480484 SULT6B1Q6IMI4 303 aa12.23□□□□□ -0.45
COMMD4-203ENST00000480484 EVI5LQ96CN4 794 aa12.23□□□□□ -0.45
COMMD4-203ENST00000480484 MEIS3Q99687 375 aa12.23□□□□□ -0.45
COMMD4-203ENST00000480484 TTC12Q9H892 705 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-203ENST00000480484 PALD1Q9ULE6 856 aa12.23□□□□□ -0.45
COMMD4-203ENST00000480484 ZNF853P0CG23 659 aa12.22□□□□□ -0.45
COMMD4-203ENST00000480484 TWISTNBQ3B726 338 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-203ENST00000480484 ZNF710Q8N1W2 664 aa12.22□□□□□ -0.45
COMMD4-203ENST00000480484 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.22□□□□□ -0.45
COMMD4-203ENST00000480484 RIOK3O14730 519 aaKnown RBP12.22□□□□□ -0.45
COMMD4-203ENST00000480484 HDGFP51858 240 aaKnown RBP12.22□□□□□ -0.45
COMMD4-203ENST00000480484 INTS3Q68E01 1043 aaKnown RBP12.22□□□□□ -0.45
COMMD4-203ENST00000480484 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-203ENST00000480484 OS9Q13438 667 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-203ENST00000480484 IFT57Q9NWB7 429 aa12.22□□□□□ -0.45
COMMD4-203ENST00000480484 USP25Q9UHP3 1055 aa12.22□□□□□ -0.45
COMMD4-203ENST00000480484 STK24Q9Y6E0 443 aa12.22□□□□□ -0.45
COMMD4-203ENST00000480484 MBD3O95983 291 aa12.21□□□□□ -0.45
COMMD4-203ENST00000480484 GNAI1P63096 354 aa12.21□□□□□ -0.45
COMMD4-203ENST00000480484 SETQ01105 290 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-203ENST00000480484 NOLC1Q14978 699 aaKnown RBP eCLIP12.21□□□□□ -0.45
COMMD4-203ENST00000480484 HSP90AB4PQ58FF6 505 aa12.21□□□□□ -0.45
COMMD4-203ENST00000480484 UTP14CQ5TAP6 766 aaKnown RBP12.21□□□□□ -0.45
COMMD4-203ENST00000480484 SND1Q7KZF4 910 aaKnown RBP eCLIP12.21□□□□□ -0.45
COMMD4-203ENST00000480484 NPHP4O75161 1426 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-203ENST00000480484 ATP2B3Q16720 1220 aa12.21□□□□□ -0.46
COMMD4-203ENST00000480484 CASC1Q6TDU7 716 aa12.21□□□□□ -0.46
COMMD4-203ENST00000480484 CHMP4BQ9H444 224 aaKnown RBP12.21□□□□□ -0.46
COMMD4-203ENST00000480484 FOXO3O43524 673 aa12.2□□□□□ -0.46
COMMD4-203ENST00000480484 GADD45BO75293 160 aaPredicted RBP12.2□□□□□ -0.46
COMMD4-203ENST00000480484 MAP4K4O95819 1239 aaPredicted RBP12.2□□□□□ -0.46
COMMD4-203ENST00000480484 TTC22Q5TAA0 569 aa12.2□□□□□ -0.46
COMMD4-203ENST00000480484 G2E3Q7L622 706 aa12.2□□□□□ -0.46
COMMD4-203ENST00000480484 DRC1Q96MC2 740 aa12.2□□□□□ -0.46
COMMD4-203ENST00000480484 NEK4P51957 841 aa12.2□□□□□ -0.46
COMMD4-203ENST00000480484 VTI1AQ96AJ9 217 aa12.2□□□□□ -0.46
COMMD4-203ENST00000480484 KIF3AQ9Y496 699 aa12.2□□□□□ -0.46
COMMD4-203ENST00000480484 PEAK1Q9H792 1746 aa12.2□□□□□ -0.46
COMMD4-203ENST00000480484 UPF3BQ9BZI7 483 aaKnown RBP12.2□□□□□ -0.46
COMMD4-203ENST00000480484 EXOC6BQ9Y2D4 811 aa12.2□□□□□ -0.46
COMMD4-203ENST00000480484 HMGN5P82970 282 aaKnown RBP12.19□□□□□ -0.46
COMMD4-203ENST00000480484 SLC4A10Q6U841 1118 aa12.19□□□□□ -0.46
COMMD4-203ENST00000480484 APBB1IPQ7Z5R6 666 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-203ENST00000480484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.46
COMMD4-203ENST00000480484 HOXD11P31277 338 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-203ENST00000480484 PRIMPOLQ96LW4 560 aa12.19□□□□□ -0.46
COMMD4-203ENST00000480484 USP6P35125 1406 aa12.19□□□□□ -0.46
COMMD4-203ENST00000480484 DDX54Q8TDD1 881 aaKnown RBP12.18□□□□□ -0.46
COMMD4-203ENST00000480484 SYAP1Q96A49 352 aaPredicted RBP12.18□□□□□ -0.46
COMMD4-203ENST00000480484 OVOS2A0A0J9YW53 1432 aa12.18□□□□□ -0.46
COMMD4-203ENST00000480484 OVOS2Q6IE36 1432 aa12.18□□□□□ -0.46
COMMD4-203ENST00000480484 ALS2Q96Q42 1657 aa12.18□□□□□ -0.46
COMMD4-203ENST00000480484 UNC5CLQ8IV45 518 aa12.18□□□□□ -0.46
COMMD4-203ENST00000480484 PIBF1Q8WXW3 757 aa12.18□□□□□ -0.46
COMMD4-203ENST00000480484 KCNG1Q9UIX4 513 aa12.18□□□□□ -0.46
COMMD4-203ENST00000480484 NUTM2GQ5VZR2 741 aa12.18□□□□□ -0.46
COMMD4-203ENST00000480484 ABCC6O95255 1503 aa12.17□□□□□ -0.46
COMMD4-203ENST00000480484 PDCL2Q8N4E4 241 aa12.17□□□□□ -0.46
COMMD4-203ENST00000480484 TMX3Q96JJ7 454 aa12.17□□□□□ -0.46
COMMD4-203ENST00000480484 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
COMMD4-203ENST00000480484 MSH6P52701 1360 aa12.17□□□□□ -0.46
COMMD4-203ENST00000480484 ADCY5O95622 1261 aa12.17□□□□□ -0.46
COMMD4-203ENST00000480484 COL9A3Q14050 684 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-203ENST00000480484 KLHL42Q9P2K6 505 aa12.17□□□□□ -0.46
COMMD4-203ENST00000480484 ABCC4O15439 1325 aa12.17□□□□□ -0.46
COMMD4-203ENST00000480484 REC8O95072 547 aa12.16□□□□□ -0.46
COMMD4-203ENST00000480484 SREK1Q8WXA9 508 aaKnown RBP12.16□□□□□ -0.46
COMMD4-203ENST00000480484 GTPBP4Q9BZE4 634 aaKnown RBP12.16□□□□□ -0.46
COMMD4-203ENST00000480484 MAP3K19Q56UN5 1328 aa12.16□□□□□ -0.46
COMMD4-203ENST00000480484 RGPD8O14715 1765 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-203ENST00000480484 CPA1P15085 419 aa12.16□□□□□ -0.46
COMMD4-203ENST00000480484 U2AF2P26368 475 aaKnown RBP eCLIP12.15□□□□□ -0.46
COMMD4-203ENST00000480484 EID1Q9Y6B2 187 aa12.15□□□□□ -0.46
COMMD4-203ENST00000480484 WNK3Q9BYP7 1800 aa12.15□□□□□ -0.46
COMMD4-203ENST00000480484 PHF14O94880 888 aa12.15□□□□□ -0.46
COMMD4-203ENST00000480484 HCLS1P14317 486 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-203ENST00000480484 LMOD3Q0VAK6 560 aa12.15□□□□□ -0.46
COMMD4-203ENST00000480484 SPTY2D1Q68D10 685 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-203ENST00000480484 CEP85Q6P2H3 762 aa12.15□□□□□ -0.46
COMMD4-203ENST00000480484 RBM33Q96EV2 1170 aaKnown RBP12.15□□□□□ -0.46
COMMD4-203ENST00000480484 DNAJC2Q99543 621 aaKnown RBP12.15□□□□□ -0.46
COMMD4-203ENST00000480484 GPIHBP1Q8IV16 184 aa12.15□□□□□ -0.47
COMMD4-203ENST00000480484 CHAF1AQ13111 956 aaPredicted RBP12.14□□□□□ -0.47
COMMD4-203ENST00000480484 NGDNQ8NEJ9 315 aaKnown RBP12.14□□□□□ -0.47
COMMD4-203ENST00000480484 DCTPP1Q9H773 170 aa12.14□□□□□ -0.47
COMMD4-203ENST00000480484 TCHHQ07283 1943 aa12.14□□□□□ -0.47
COMMD4-203ENST00000480484 RBM47A0AV96 593 aaKnown RBP12.14□□□□□ -0.47
COMMD4-203ENST00000480484 ERC2O15083 957 aa12.14□□□□□ -0.47
COMMD4-203ENST00000480484 E2F4Q16254 413 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms