RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 VPS53Q5VIR6 699 aa12.58□□□□□ -0.39
SIK3-210ENST00000480468 EXOC6BQ9Y2D4 811 aa12.58□□□□□ -0.39
SIK3-210ENST00000480468 ARHGEF10O15013 1369 aa12.58□□□□□ -0.4
SIK3-210ENST00000480468 PNMA6AP0CW24 399 aaPredicted RBP12.58□□□□□ -0.4
SIK3-210ENST00000480468 SKILP12757 684 aa12.58□□□□□ -0.4
SIK3-210ENST00000480468 TM6SF1Q9BZW5 370 aa12.58□□□□□ -0.4
SIK3-210ENST00000480468 LSG1Q9H089 658 aaKnown RBP12.58□□□□□ -0.4
SIK3-210ENST00000480468 DACT1Q9NYF0 836 aa12.58□□□□□ -0.4
SIK3-210ENST00000480468 ZRANB2O95218 330 aaKnown RBP eCLIP12.57□□□□□ -0.4
SIK3-210ENST00000480468 CCZ1BP86790 482 aa12.57□□□□□ -0.4
SIK3-210ENST00000480468 CCZ1P86791 482 aaPredicted RBP12.57□□□□□ -0.4
SIK3-210ENST00000480468 CTR9Q6PD62 1173 aa12.57□□□□□ -0.4
SIK3-210ENST00000480468 UNC5CLQ8IV45 518 aa12.57□□□□□ -0.4
SIK3-210ENST00000480468 IL25Q9H293 177 aa12.57□□□□□ -0.4
SIK3-210ENST00000480468 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.57□□□□□ -0.4
SIK3-210ENST00000480468 V9GYY5 206 aaPredicted RBP12.57□□□□□ -0.4
SIK3-210ENST00000480468 ATP7BP35670 1465 aa12.57□□□□□ -0.4
SIK3-210ENST00000480468 PDCP20941 246 aa12.57□□□□□ -0.4
SIK3-210ENST00000480468 PLA2G4AP47712 749 aa12.57□□□□□ -0.4
SIK3-210ENST00000480468 CLCN6P51797 869 aa12.57□□□□□ -0.4
SIK3-210ENST00000480468 CAMK4Q16566 473 aa12.57□□□□□ -0.4
SIK3-210ENST00000480468 CCDC93Q567U6 631 aa12.57□□□□□ -0.4
SIK3-210ENST00000480468 CKAP2LQ8IYA6 745 aa12.57□□□□□ -0.4
SIK3-210ENST00000480468 HECW2Q9P2P5 1572 aa12.57□□□□□ -0.4
SIK3-210ENST00000480468 CHD2O14647 1828 aaKnown RBP12.56□□□□□ -0.4
SIK3-210ENST00000480468 KCNJ6P48051 423 aa12.56□□□□□ -0.4
SIK3-210ENST00000480468 ATP8B2P98198 1209 aa12.56□□□□□ -0.4
SIK3-210ENST00000480468 FILIP1Q7Z7B0 1213 aa12.56□□□□□ -0.4
SIK3-210ENST00000480468 CCDC83Q8IWF9 413 aa12.56□□□□□ -0.4
SIK3-210ENST00000480468 RASEFQ8IZ41 740 aa12.56□□□□□ -0.4
SIK3-210ENST00000480468 UBXN6Q9BZV1 441 aa12.56□□□□□ -0.4
SIK3-210ENST00000480468 RASSF4Q9H2L5 321 aa12.56□□□□□ -0.4
SIK3-210ENST00000480468 VPS37CA5D8V6 355 aaPredicted RBP12.56□□□□□ -0.4
SIK3-210ENST00000480468 LARGE1O95461 756 aa12.56□□□□□ -0.4
SIK3-210ENST00000480468 GNAI3P08754 354 aa12.56□□□□□ -0.4
SIK3-210ENST00000480468 GSDMDP57764 484 aa12.56□□□□□ -0.4
SIK3-210ENST00000480468 IQCB1Q15051 598 aa12.56□□□□□ -0.4
SIK3-210ENST00000480468 KCNB2Q92953 911 aa12.56□□□□□ -0.4
SIK3-210ENST00000480468 ARGLU1Q9NWB6 273 aaPredicted RBP12.56□□□□□ -0.4
SIK3-210ENST00000480468 FAM83GA6ND36 823 aa12.55□□□□□ -0.4
SIK3-210ENST00000480468 GOLGA6L4A6NEF3 574 aa12.55□□□□□ -0.4
SIK3-210ENST00000480468 CCDC69A6NI79 296 aa12.55□□□□□ -0.4
SIK3-210ENST00000480468 GPS2Q13227 327 aa12.55□□□□□ -0.4
SIK3-210ENST00000480468 DHX8Q14562 1220 aaKnown RBP12.55□□□□□ -0.4
SIK3-210ENST00000480468 GTF3C6Q969F1 213 aa12.55□□□□□ -0.4
SIK3-210ENST00000480468 DNAJC25Q9H1X3 360 aa12.55□□□□□ -0.4
SIK3-210ENST00000480468 PPP6R1Q9UPN7 881 aa12.55□□□□□ -0.4
SIK3-210ENST00000480468 CRYBG1Q9Y4K1 1723 aa12.55□□□□□ -0.4
SIK3-210ENST00000480468 GOLGA6L19H0YKK7 550 aa12.54□□□□□ -0.4
SIK3-210ENST00000480468 KIDINS220Q9ULH0 1771 aa12.54□□□□□ -0.4
SIK3-210ENST00000480468 GIGYF1O75420 1035 aaPredicted RBP12.54□□□□□ -0.4
SIK3-210ENST00000480468 CASTP20810 708 aaKnown RBP12.54□□□□□ -0.4
SIK3-210ENST00000480468 SAFB2Q14151 953 aaKnown RBP eCLIP12.54□□□□□ -0.4
SIK3-210ENST00000480468 ERCC6LQ2NKX8 1250 aa12.54□□□□□ -0.4
SIK3-210ENST00000480468 ZSWIM6Q9HCJ5 1215 aa12.54□□□□□ -0.4
SIK3-210ENST00000480468 PDRG1Q9NUG6 133 aa12.54□□□□□ -0.4
SIK3-210ENST00000480468 PSDA5PKW4 1024 aaPredicted RBP12.53□□□□□ -0.4
SIK3-210ENST00000480468 SLC4A2P04920 1241 aa12.53□□□□□ -0.4
SIK3-210ENST00000480468 CHRM1P11229 460 aaPredicted RBP12.53□□□□□ -0.4
SIK3-210ENST00000480468 ST3GAL1Q11201 340 aa12.53□□□□□ -0.4
SIK3-210ENST00000480468 SNW1Q13573 536 aaKnown RBP12.53□□□□□ -0.4
SIK3-210ENST00000480468 LARP1BQ659C4 914 aaKnown RBP12.53□□□□□ -0.4
SIK3-210ENST00000480468 TMCO3Q6UWJ1 677 aa12.53□□□□□ -0.4
SIK3-210ENST00000480468 TEX2Q8IWB9 1127 aa12.53□□□□□ -0.4
SIK3-210ENST00000480468 RGS22Q8NE09 1264 aa12.53□□□□□ -0.4
SIK3-210ENST00000480468 SPATA32Q96LK8 384 aa12.53□□□□□ -0.4
SIK3-210ENST00000480468 OSBPL5Q9H0X9 879 aaPredicted RBP12.53□□□□□ -0.4
SIK3-210ENST00000480468 GEMIN8Q9NWZ8 242 aaKnown RBP12.53□□□□□ -0.4
SIK3-210ENST00000480468 CWC15Q9P013 229 aaKnown RBP12.53□□□□□ -0.4
SIK3-210ENST00000480468 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.53□□□□□ -0.4
SIK3-210ENST00000480468 TPM1P09493 284 aa12.53□□□□□ -0.4
SIK3-210ENST00000480468 TNNT3P45378 269 aaPredicted RBP12.53□□□□□ -0.4
SIK3-210ENST00000480468 NOP2P46087 812 aaKnown RBP12.53□□□□□ -0.4
SIK3-210ENST00000480468 LEO1Q8WVC0 666 aaPredicted RBP12.53□□□□□ -0.4
SIK3-210ENST00000480468 IMPACTQ9P2X3 320 aa12.53□□□□□ -0.4
SIK3-210ENST00000480468 CYP46A1Q9Y6A2 500 aa12.53□□□□□ -0.4
SIK3-210ENST00000480468 SETD1AO15047 1707 aaKnown RBP12.52□□□□□ -0.4
SIK3-210ENST00000480468 CTAGE5O15320 804 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 MAPK8IP2Q13387 824 aaPredicted RBP12.52□□□□□ -0.41
SIK3-210ENST00000480468 DCTN1Q14203 1278 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 ARID5BQ14865 1188 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 SRRTQ9BXP5 876 aaKnown RBP12.52□□□□□ -0.41
SIK3-210ENST00000480468 PSD3Q9NYI0 1048 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 RSPH14Q9UHP6 348 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 N4BP2Q86UW6 1770 aaPredicted RBP12.52□□□□□ -0.41
SIK3-210ENST00000480468 RAB11FIP3O75154 756 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 STX1AQ16623 288 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 ARHGAP29Q52LW3 1261 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 CDC37L1Q7L3B6 337 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 CNTROBQ8N137 903 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 NFATC2IPQ8NCF5 419 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 PI4K2BQ8TCG2 481 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 TRERF1Q96PN7 1200 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 CABP1Q9NZU7 370 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 EMILIN1Q9Y6C2 1016 aa12.52□□□□□ -0.41
SIK3-210ENST00000480468 SOS1Q07889 1333 aaPredicted RBP12.51□□□□□ -0.41
SIK3-210ENST00000480468 MINK1Q8N4C8 1332 aaPredicted RBP12.51□□□□□ -0.41
SIK3-210ENST00000480468 PNMA6EA0A0J9YXQ4 647 aa12.51□□□□□ -0.41
SIK3-210ENST00000480468 SYT10Q6XYQ8 523 aa12.51□□□□□ -0.41
SIK3-210ENST00000480468 IQUBQ8NA54 791 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms