RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 CWC27Q6UX04 472 aaKnown RBP20.78■□□□□ 0.92
PKD1-213ENST00000480227 SLC52A2Q9HAB3 445 aa20.78■□□□□ 0.92
PKD1-213ENST00000480227 GRM8O00222 908 aa20.77■□□□□ 0.92
PKD1-213ENST00000480227 CLASRPQ8N2M8 674 aaKnown RBP20.77■□□□□ 0.92
PKD1-213ENST00000480227 LINS1Q8NG48 757 aa20.77■□□□□ 0.92
PKD1-213ENST00000480227 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.77■□□□□ 0.92
PKD1-213ENST00000480227 CSB-PGBD3P0DP91 1061 aa20.77■□□□□ 0.91
PKD1-213ENST00000480227 PHKG2P15735 406 aa20.77■□□□□ 0.91
PKD1-213ENST00000480227 BICC1Q9H694 974 aaKnown RBP20.77■□□□□ 0.91
PKD1-213ENST00000480227 TATP17735 454 aaPredicted RBP20.76■□□□□ 0.91
PKD1-213ENST00000480227 CRYBG1Q9Y4K1 1723 aa20.76■□□□□ 0.91
PKD1-213ENST00000480227 RAD50Q92878 1312 aa20.76■□□□□ 0.91
PKD1-213ENST00000480227 PIP4K2AP48426 406 aaPredicted RBP20.75■□□□□ 0.91
PKD1-213ENST00000480227 SPG7Q9UQ90 795 aa20.75■□□□□ 0.91
PKD1-213ENST00000480227 COL18A1P39060 1754 aa20.75■□□□□ 0.91
PKD1-213ENST00000480227 DDX58O95786 925 aaKnown RBP20.75■□□□□ 0.91
PKD1-213ENST00000480227 IGKV5-2P06315 115 aa20.75■□□□□ 0.91
PKD1-213ENST00000480227 RIC3Q7Z5B4 369 aa20.75■□□□□ 0.91
PKD1-213ENST00000480227 USP42Q9H9J4 1324 aaKnown RBP20.75■□□□□ 0.91
PKD1-213ENST00000480227 GLRX3O76003 335 aaKnown RBP20.74■□□□□ 0.91
PKD1-213ENST00000480227 CUL4AQ13619 759 aa20.74■□□□□ 0.91
PKD1-213ENST00000480227 ZNF496Q96IT1 587 aaPredicted RBP20.74■□□□□ 0.91
PKD1-213ENST00000480227 LSG1Q9H089 658 aaKnown RBP20.74■□□□□ 0.91
PKD1-213ENST00000480227 TTC41PQ6P2S7 1318 aa20.74■□□□□ 0.91
PKD1-213ENST00000480227 IL17RAQ96F46 866 aa20.74■□□□□ 0.91
PKD1-213ENST00000480227 LMTK3Q96Q04 1460 aa20.73■□□□□ 0.91
PKD1-213ENST00000480227 IFIT2P09913 472 aaKnown RBP20.73■□□□□ 0.91
PKD1-213ENST00000480227 ZSCAN23Q3MJ62 389 aa20.73■□□□□ 0.91
PKD1-213ENST00000480227 AACSQ86V21 672 aa20.73■□□□□ 0.91
PKD1-213ENST00000480227 RASEFQ8IZ41 740 aa20.73■□□□□ 0.91
PKD1-213ENST00000480227 GPT2Q8TD30 523 aa20.73■□□□□ 0.91
PKD1-213ENST00000480227 XAGE3Q8WTP9 111 aa20.73■□□□□ 0.91
PKD1-213ENST00000480227 KLHDC4Q8TBB5 520 aa20.72■□□□□ 0.91
PKD1-213ENST00000480227 SIL1Q9H173 461 aa20.72■□□□□ 0.91
PKD1-213ENST00000480227 ECHDC1Q9NTX5 307 aa20.72■□□□□ 0.91
PKD1-213ENST00000480227 SNX14Q9Y5W7 946 aa20.72■□□□□ 0.91
PKD1-213ENST00000480227 CYP27B1O15528 508 aa20.72■□□□□ 0.91
PKD1-213ENST00000480227 SASH1O94885 1247 aa20.72■□□□□ 0.91
PKD1-213ENST00000480227 NASPP49321 788 aaPredicted RBP20.72■□□□□ 0.91
PKD1-213ENST00000480227 COPS6Q7L5N1 327 aa20.72■□□□□ 0.91
PKD1-213ENST00000480227 IFNL2Q8IZJ0 200 aa20.72■□□□□ 0.91
PKD1-213ENST00000480227 RBM27Q9P2N5 1060 aaKnown RBP20.72■□□□□ 0.91
PKD1-213ENST00000480227 USP16Q9Y5T5 823 aa20.72■□□□□ 0.91
PKD1-213ENST00000480227 UTYO14607 1347 aa20.72■□□□□ 0.91
PKD1-213ENST00000480227 KIAA1211Q6ZU35 1233 aa20.71■□□□□ 0.91
PKD1-213ENST00000480227 ERC1Q8IUD2 1116 aa20.71■□□□□ 0.91
PKD1-213ENST00000480227 INTS4Q96HW7 963 aaKnown RBP20.71■□□□□ 0.91
PKD1-213ENST00000480227 DIAPH3Q9NSV4 1193 aa20.71■□□□□ 0.91
PKD1-213ENST00000480227 EPB41L2O43491 1005 aaKnown RBP20.7■□□□□ 0.9
PKD1-213ENST00000480227 BRD1O95696 1058 aa20.7■□□□□ 0.9
PKD1-213ENST00000480227 JARID2Q92833 1246 aaPredicted RBP20.7■□□□□ 0.9
PKD1-213ENST00000480227 EAF2Q96CJ1 260 aaPredicted RBP20.7■□□□□ 0.9
PKD1-213ENST00000480227 TRIM44Q96DX7 344 aaPredicted RBP20.7■□□□□ 0.9
PKD1-213ENST00000480227 MYD88Q99836 296 aa20.7■□□□□ 0.9
PKD1-213ENST00000480227 LARP6Q9BRS8 491 aaKnown RBP20.7■□□□□ 0.9
PKD1-213ENST00000480227 NEURL1BA8MQ27 555 aa20.7■□□□□ 0.9
PKD1-213ENST00000480227 FOXD4L6Q3SYB3 417 aaPredicted RBP20.7■□□□□ 0.9
PKD1-213ENST00000480227 LARP1Q6PKG0 1096 aaKnown RBP20.7■□□□□ 0.9
PKD1-213ENST00000480227 FOXD4L3Q6VB84 417 aaPredicted RBP20.7■□□□□ 0.9
PKD1-213ENST00000480227 CCDC8Q9H0W5 538 aaPredicted RBP20.7■□□□□ 0.9
PKD1-213ENST00000480227 HDAC5Q9UQL6 1122 aa20.7■□□□□ 0.9
PKD1-213ENST00000480227 ZNF445P59923 1031 aa20.69■□□□□ 0.9
PKD1-213ENST00000480227 TLR7Q9NYK1 1049 aaKnown RBP20.69■□□□□ 0.9
PKD1-213ENST00000480227 NSFL1CQ9UNZ2 370 aaKnown RBP20.69■□□□□ 0.9
PKD1-213ENST00000480227 TCHHQ07283 1943 aa20.69■□□□□ 0.9
PKD1-213ENST00000480227 CPA1P15085 419 aa20.68■□□□□ 0.9
PKD1-213ENST00000480227 G3BP1Q13283 466 aaKnown RBP eCLIP20.68■□□□□ 0.9
PKD1-213ENST00000480227 EPHA10Q5JZY3 1008 aa20.68■□□□□ 0.9
PKD1-213ENST00000480227 PTH1RQ03431 593 aa20.68■□□□□ 0.9
PKD1-213ENST00000480227 NEXNQ0ZGT2 675 aa20.68■□□□□ 0.9
PKD1-213ENST00000480227 GPATCH3Q96I76 525 aa20.68■□□□□ 0.9
PKD1-213ENST00000480227 TNS3Q68CZ2 1445 aa20.68■□□□□ 0.9
PKD1-213ENST00000480227 GCKRQ14397 625 aa20.67■□□□□ 0.9
PKD1-213ENST00000480227 TTC5Q8N0Z6 440 aa20.67■□□□□ 0.9
PKD1-213ENST00000480227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.67■□□□□ 0.9
PKD1-213ENST00000480227 LRP10Q7Z4F1 713 aa20.67■□□□□ 0.9
PKD1-213ENST00000480227 ERBB4Q15303 1308 aa20.66■□□□□ 0.9
PKD1-213ENST00000480227 KDM4FA0A1W2PPD8 638 aa20.66■□□□□ 0.9
PKD1-213ENST00000480227 DCAF5Q96JK2 942 aa20.66■□□□□ 0.9
PKD1-213ENST00000480227 TTC14Q96N46 770 aa20.66■□□□□ 0.9
PKD1-213ENST00000480227 METTL22Q9BUU2 404 aaPredicted RBP20.66■□□□□ 0.9
PKD1-213ENST00000480227 ESPNB1AK53 854 aa20.65■□□□□ 0.9
PKD1-213ENST00000480227 SNRPA1P09661 255 aaKnown RBP20.65■□□□□ 0.9
PKD1-213ENST00000480227 PRIM1P49642 420 aaKnown RBP20.65■□□□□ 0.9
PKD1-213ENST00000480227 AK2P54819 239 aa20.65■□□□□ 0.9
PKD1-213ENST00000480227 ANKRD13DQ6ZTN6 518 aa20.65■□□□□ 0.9
PKD1-213ENST00000480227 CADPS2Q86UW7 1296 aa20.65■□□□□ 0.9
PKD1-213ENST00000480227 TMEM63CQ9P1W3 806 aa20.65■□□□□ 0.9
PKD1-213ENST00000480227 AFDNP55196 1824 aaKnown RBP20.65■□□□□ 0.9
PKD1-213ENST00000480227 DCCP43146 1447 aa20.65■□□□□ 0.9
PKD1-213ENST00000480227 CLCN1P35523 988 aa20.65■□□□□ 0.9
PKD1-213ENST00000480227 CASTP20810 708 aaKnown RBP20.64■□□□□ 0.89
PKD1-213ENST00000480227 HSPA2P54652 639 aa20.64■□□□□ 0.89
PKD1-213ENST00000480227 ANP32BQ92688 251 aaKnown RBP20.64■□□□□ 0.89
PKD1-213ENST00000480227 EVI5LQ96CN4 794 aa20.64■□□□□ 0.89
PKD1-213ENST00000480227 FAM227BQ96M60 508 aa20.64■□□□□ 0.89
PKD1-213ENST00000480227 SPATA31A3Q5VYP0 1347 aa20.64■□□□□ 0.89
PKD1-213ENST00000480227 PRPF40BQ6NWY9 871 aaKnown RBP20.64■□□□□ 0.89
PKD1-213ENST00000480227 RUFY2Q8WXA3 655 aa20.64■□□□□ 0.89
PKD1-213ENST00000480227 BOLA2Q9H3K6 86 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms