RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, human

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKP4-210	ENST00000480171	ZSCAN22	P10073	491 aa	Predicted RBP	10.44	□□□□□ -0.74
PKP4-210	ENST00000480171	EIF2S2	P20042	333 aa	Known RBP	10.44	□□□□□ -0.74
PKP4-210	ENST00000480171	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.44	□□□□□ -0.74
PKP4-210	ENST00000480171	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.44	□□□□□ -0.74
PKP4-210	ENST00000480171	SMC3	Q9UQE7	1217 aa		10.44	□□□□□ -0.74
PKP4-210	ENST00000480171	TTC41P	Q6P2S7	1318 aa		10.44	□□□□□ -0.74
PKP4-210	ENST00000480171	GADD45B	O75293	160 aa	Predicted RBP	10.44	□□□□□ -0.74
PKP4-210	ENST00000480171	GLRX3	O76003	335 aa	Known RBP	10.44	□□□□□ -0.74
PKP4-210	ENST00000480171	ABTB2	Q8N961	1025 aa		10.44	□□□□□ -0.74
PKP4-210	ENST00000480171	DNAAF4	Q8WXU2	420 aa		10.44	□□□□□ -0.74
PKP4-210	ENST00000480171	MAP7D2	Q96T17	732 aa		10.44	□□□□□ -0.74
PKP4-210	ENST00000480171	DIAPH3	Q9NSV4	1193 aa		10.44	□□□□□ -0.74
PKP4-210	ENST00000480171	NUTM2G	Q5VZR2	741 aa		10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	GPATCH3	Q96I76	525 aa		10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	LSG1	Q9H089	658 aa	Known RBP	10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	GDPD2	Q9HCC8	539 aa		10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	RGPD8	O14715	1765 aa	Predicted RBP	10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	STX6	O43752	255 aa		10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	AK2	P54819	239 aa		10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	UBE2H	P62256	183 aa		10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	TTC14	Q96N46	770 aa		10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	NWD1	Q149M9	1564 aa		10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	USP42	Q9H9J4	1324 aa	Known RBP	10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	KIAA2012	Q0VF49	1180 aa		10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	CLASRP	Q8N2M8	674 aa	Known RBP	10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	IL25	Q9H293	177 aa		10.43	□□□□□ -0.74
PKP4-210	ENST00000480171	SLIT1	O75093	1534 aa		10.42	□□□□□ -0.74
PKP4-210	ENST00000480171	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.42	□□□□□ -0.74
PKP4-210	ENST00000480171	EIF4A1	P60842	406 aa	Known RBP	10.42	□□□□□ -0.74
PKP4-210	ENST00000480171	BEND3	Q5T5X7	828 aa		10.42	□□□□□ -0.74
PKP4-210	ENST00000480171	CWC27	Q6UX04	472 aa	Known RBP	10.42	□□□□□ -0.74
PKP4-210	ENST00000480171	PI4KAP2	A4QPH2	592 aa		10.42	□□□□□ -0.74
PKP4-210	ENST00000480171	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.42	□□□□□ -0.74
PKP4-210	ENST00000480171	SASS6	Q6UVJ0	657 aa		10.42	□□□□□ -0.74
PKP4-210	ENST00000480171	ERC1	Q8IUD2	1116 aa		10.42	□□□□□ -0.74
PKP4-210	ENST00000480171	PI4KAP1	Q8N8J0	262 aa		10.42	□□□□□ -0.74
PKP4-210	ENST00000480171	ARHGAP23	Q9P227	1491 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	CEMIP	Q8WUJ3	1361 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	F13A1	P00488	732 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	CAST	P20810	708 aa	Known RBP	10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	SYT1	P21579	422 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	TEF	Q10587	303 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	CHPF2	Q9P2E5	772 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	CNPY2	Q9Y2B0	182 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	USP54	Q70EL1	1684 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	UQCRHL	A0A096LP55	91 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	CLSTN1	O94985	981 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	UQCRH	P07919	91 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	RUFY3	Q7L099	469 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	USHBP1	Q8N6Y0	703 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	RGS22	Q8NE09	1264 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	TM6SF1	Q9BZW5	370 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	PDRG1	Q9NUG6	133 aa		10.41	□□□□□ -0.74
PKP4-210	ENST00000480171	IFIT2	P09913	472 aa	Known RBP	10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	CEBPA	P49715	358 aa	Predicted RBP	10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	VPS53	Q5VIR6	699 aa		10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	MTERF4	Q7Z6M4	381 aa	Known RBP	10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	RASEF	Q8IZ41	740 aa		10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	IP6K1	Q92551	441 aa		10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	ECHDC1	Q9NTX5	307 aa		10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	SPG7	Q9UQ90	795 aa		10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	CYP46A1	Q9Y6A2	500 aa		10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	DYNC1I1	O14576	645 aa		10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	ALDH1L1	O75891	902 aa		10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	ZKSCAN1	P17029	563 aa	Predicted RBP	10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	MTX1	Q13505	466 aa		10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.4	□□□□□ -0.74
PKP4-210	ENST00000480171	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.4	□□□□□ -0.74	5e-6	■■■■□ 19.3
PKP4-210	ENST00000480171	HIP1	O00291	1037 aa		10.39	□□□□□ -0.75
PKP4-210	ENST00000480171	DBF4	Q9UBU7	674 aa	Predicted RBP	10.39	□□□□□ -0.75
PKP4-210	ENST00000480171	BTBD11	A6QL63	1104 aa		10.39	□□□□□ -0.75
PKP4-210	ENST00000480171	FIBP	O43427	364 aa		10.39	□□□□□ -0.75
PKP4-210	ENST00000480171	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.39	□□□□□ -0.75
PKP4-210	ENST00000480171	AKAP4	Q5JQC9	854 aa		10.39	□□□□□ -0.75
PKP4-210	ENST00000480171	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.39	□□□□□ -0.75
PKP4-210	ENST00000480171	EVI5L	Q96CN4	794 aa		10.39	□□□□□ -0.75
PKP4-210	ENST00000480171	JAKMIP1	Q96N16	626 aa	Known RBP	10.39	□□□□□ -0.75
PKP4-210	ENST00000480171	HYPK	Q9NX55	129 aa		10.39	□□□□□ -0.75
PKP4-210	ENST00000480171	GJB2	P29033	226 aa		10.38	□□□□□ -0.75
PKP4-210	ENST00000480171	CCDC83	Q8IWF9	413 aa		10.38	□□□□□ -0.75
PKP4-210	ENST00000480171	FAM13B	Q9NYF5	915 aa		10.38	□□□□□ -0.75
PKP4-210	ENST00000480171	KIF13A	Q9H1H9	1805 aa		10.38	□□□□□ -0.75
PKP4-210	ENST00000480171	KCNJ4	P48050	445 aa		10.38	□□□□□ -0.75
PKP4-210	ENST00000480171	PRPF40B	Q6NWY9	871 aa	Known RBP	10.38	□□□□□ -0.75
PKP4-210	ENST00000480171	SECISBP2L	Q93073	1101 aa	Known RBP	10.38	□□□□□ -0.75
PKP4-210	ENST00000480171	LGR6	Q9HBX8	967 aa		10.38	□□□□□ -0.75
PKP4-210	ENST00000480171	ZSWIM6	Q9HCJ5	1215 aa		10.38	□□□□□ -0.75
PKP4-210	ENST00000480171	USP25	Q9UHP3	1055 aa		10.38	□□□□□ -0.75
PKP4-210	ENST00000480171	MARF1	Q9Y4F3	1742 aa	Known RBP	10.38	□□□□□ -0.75
PKP4-210	ENST00000480171	TCHH	Q07283	1943 aa		10.38	□□□□□ -0.75
PKP4-210	ENST00000480171	MED1	Q15648	1581 aa	Predicted RBP	10.38	□□□□□ -0.75
PKP4-210	ENST00000480171	CRYBG1	Q9Y4K1	1723 aa		10.37	□□□□□ -0.75
PKP4-210	ENST00000480171	ADCY5	O95622	1261 aa		10.37	□□□□□ -0.75
PKP4-210	ENST00000480171	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.37	□□□□□ -0.75
PKP4-210	ENST00000480171	KCNB2	Q92953	911 aa		10.37	□□□□□ -0.75
PKP4-210	ENST00000480171	LARP6	Q9BRS8	491 aa	Known RBP	10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms