RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 FAM198AQ9UFP1 575 aa7.42□□□□□ -1.22
CAPN9-204ENST00000480004 CENPJQ9HC77 1338 aaPredicted RBP7.42□□□□□ -1.22
CAPN9-204ENST00000480004 NSD3Q9BZ95 1437 aa7.42□□□□□ -1.22
CAPN9-204ENST00000480004 CICQ96RK0 1608 aaPredicted RBP7.41□□□□□ -1.22
CAPN9-204ENST00000480004 PIK3C2AO00443 1686 aa7.41□□□□□ -1.22
CAPN9-204ENST00000480004 LY75O60449 1722 aa7.41□□□□□ -1.22
CAPN9-204ENST00000480004 ANKRD24Q8TF21 1146 aa7.41□□□□□ -1.22
CAPN9-204ENST00000480004 EYA1Q99502 592 aa7.41□□□□□ -1.22
CAPN9-204ENST00000480004 BCS1LQ9Y276 419 aa7.41□□□□□ -1.22
CAPN9-204ENST00000480004 ZCRB1Q8TBF4 217 aaKnown RBP7.4□□□□□ -1.22
CAPN9-204ENST00000480004 TSKSQ9UJT2 592 aa7.4□□□□□ -1.22
CAPN9-204ENST00000480004 EVC2Q86UK5 1308 aa7.4□□□□□ -1.22
CAPN9-204ENST00000480004 C10orf71Q711Q0 1435 aa7.4□□□□□ -1.22
CAPN9-204ENST00000480004 QRICH2Q9H0J4 1663 aa7.4□□□□□ -1.23
CAPN9-204ENST00000480004 NFAT5O94916 1531 aa7.39□□□□□ -1.23
CAPN9-204ENST00000480004 RCCD1A6NED2 376 aa7.39□□□□□ -1.23
CAPN9-204ENST00000480004 NBPF26B4DH59 902 aa7.39□□□□□ -1.23
CAPN9-204ENST00000480004 SSFA2P28290 1259 aa7.39□□□□□ -1.23
CAPN9-204ENST00000480004 DIXDC1Q155Q3 683 aa7.39□□□□□ -1.23
CAPN9-204ENST00000480004 C9orf131Q5VYM1 1079 aa7.39□□□□□ -1.23
CAPN9-204ENST00000480004 SMARCC1Q92922 1105 aaPredicted RBP7.39□□□□□ -1.23
CAPN9-204ENST00000480004 RRAGCQ9HB90 399 aa7.39□□□□□ -1.23
CAPN9-204ENST00000480004 PRDM10Q9NQV6 1147 aa7.39□□□□□ -1.23
CAPN9-204ENST00000480004 TRIM6-TRIM34B2RNG4 842 aa7.38□□□□□ -1.23
CAPN9-204ENST00000480004 MYSM1Q5VVJ2 828 aa7.38□□□□□ -1.23
CAPN9-204ENST00000480004 NSD2O96028 1365 aa7.37□□□□□ -1.23
CAPN9-204ENST00000480004 USP31Q70CQ4 1352 aa7.37□□□□□ -1.23
CAPN9-204ENST00000480004 KTN1Q86UP2 1357 aaKnown RBP7.37□□□□□ -1.23
CAPN9-204ENST00000480004 CGNL1Q0VF96 1302 aa7.37□□□□□ -1.23
CAPN9-204ENST00000480004 VEGFAP15692 232 aaPredicted RBP7.37□□□□□ -1.23
CAPN9-204ENST00000480004 DNAJB2P25686 324 aa7.37□□□□□ -1.23
CAPN9-204ENST00000480004 PALLDQ8WX93 1383 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 GOLGB1Q14789 3259 aaKnown RBP7.36□□□□□ -1.23
CAPN9-204ENST00000480004 KIAA1210Q9ULL0 1709 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 ZC3H4Q9UPT8 1303 aaKnown RBP7.36□□□□□ -1.23
CAPN9-204ENST00000480004 C5P01031 1676 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 A0A0G2JLW4 131 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 CD46P15529 392 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 MLLT1Q03111 559 aaPredicted RBP7.36□□□□□ -1.23
CAPN9-204ENST00000480004 NUDT18Q6ZVK8 323 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 PACS2Q86VP3 889 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 SULF1Q8IWU6 871 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 NLGN1Q8N2Q7 840 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 IP6K1Q92551 441 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 TATDN2Q93075 761 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 AIDAQ96BJ3 306 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.36□□□□□ -1.23
CAPN9-204ENST00000480004 CCDC87Q9NVE4 849 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 PXDNLA1KZ92 1463 aa7.36□□□□□ -1.23
CAPN9-204ENST00000480004 DOT1LQ8TEK3 1739 aa7.35□□□□□ -1.23
CAPN9-204ENST00000480004 C3orf80F5H4A9 247 aa7.35□□□□□ -1.23
CAPN9-204ENST00000480004 MMP10P09238 476 aa7.35□□□□□ -1.23
CAPN9-204ENST00000480004 CTCFP49711 727 aaPredicted RBP7.35□□□□□ -1.23
CAPN9-204ENST00000480004 CLK2P49760 499 aaKnown RBP7.35□□□□□ -1.23
CAPN9-204ENST00000480004 NBPF1Q3BBV0 1214 aa7.35□□□□□ -1.23
CAPN9-204ENST00000480004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.35□□□□□ -1.23
CAPN9-204ENST00000480004 LTV1Q96GA3 475 aaPredicted RBP7.35□□□□□ -1.23
CAPN9-204ENST00000480004 TBC1D2Q9BYX2 928 aa7.35□□□□□ -1.23
CAPN9-204ENST00000480004 TMEM134Q9H6X4 195 aa7.35□□□□□ -1.23
CAPN9-204ENST00000480004 RNF181Q9P0P0 153 aa7.35□□□□□ -1.23
CAPN9-204ENST00000480004 PIM2Q9P1W9 311 aa7.35□□□□□ -1.23
CAPN9-204ENST00000480004 PNMA3Q9UL41 463 aa7.35□□□□□ -1.23
CAPN9-204ENST00000480004 KCPQ6ZWJ8 1503 aa7.35□□□□□ -1.23
CAPN9-204ENST00000480004 TNRC6CQ9HCJ0 1690 aaKnown RBP7.35□□□□□ -1.23
CAPN9-204ENST00000480004 DPEP1P16444 411 aa7.34□□□□□ -1.23
CAPN9-204ENST00000480004 MCM6Q14566 821 aa7.34□□□□□ -1.23
CAPN9-204ENST00000480004 MPRIPQ6WCQ1 1025 aa7.34□□□□□ -1.23
CAPN9-204ENST00000480004 PROCA1Q8NCQ7 364 aaPredicted RBP7.34□□□□□ -1.23
CAPN9-204ENST00000480004 RAPGEF4Q8WZA2 1011 aa7.34□□□□□ -1.23
CAPN9-204ENST00000480004 POLR3EQ9NVU0 708 aa7.34□□□□□ -1.23
CAPN9-204ENST00000480004 USP54Q70EL1 1684 aa7.34□□□□□ -1.23
CAPN9-204ENST00000480004 FAM208AQ9UK61 1670 aaKnown RBP7.34□□□□□ -1.23
CAPN9-204ENST00000480004 C4BP0C0L5 1744 aa7.33□□□□□ -1.24
CAPN9-204ENST00000480004 TMF1P82094 1093 aa7.33□□□□□ -1.24
CAPN9-204ENST00000480004 TUSC1Q2TAM9 212 aa7.33□□□□□ -1.24
CAPN9-204ENST00000480004 DALRD3Q5D0E6 543 aaKnown RBP7.33□□□□□ -1.24
CAPN9-204ENST00000480004 TRAPPC3LQ5T215 181 aa7.33□□□□□ -1.24
CAPN9-204ENST00000480004 HDGFL2Q7Z4V5 671 aaPredicted RBP7.33□□□□□ -1.24
CAPN9-204ENST00000480004 HOMEZQ8IX15 550 aa7.33□□□□□ -1.24
CAPN9-204ENST00000480004 OTUD5Q96G74 571 aa7.33□□□□□ -1.24
CAPN9-204ENST00000480004 DCAF5Q96JK2 942 aa7.33□□□□□ -1.24
CAPN9-204ENST00000480004 KCNK17Q96T54 332 aa7.33□□□□□ -1.24
CAPN9-204ENST00000480004 PARP3Q9Y6F1 533 aa7.33□□□□□ -1.24
CAPN9-204ENST00000480004 TAF1LQ8IZX4 1826 aa7.33□□□□□ -1.24
CAPN9-204ENST00000480004 LTN1O94822 1766 aa7.33□□□□□ -1.24
CAPN9-204ENST00000480004 PCDH11XQ9BZA7 1347 aa7.32□□□□□ -1.24
CAPN9-204ENST00000480004 PCDH11YQ9BZA8 1340 aa7.32□□□□□ -1.24
CAPN9-204ENST00000480004 GLTPD2A6NH11 291 aa7.32□□□□□ -1.24
CAPN9-204ENST00000480004 A6NJR5 290 aa7.32□□□□□ -1.24
CAPN9-204ENST00000480004 FOXN1O15353 648 aa7.32□□□□□ -1.24
CAPN9-204ENST00000480004 TATP17735 454 aaPredicted RBP7.32□□□□□ -1.24
CAPN9-204ENST00000480004 AMPHP49418 695 aa7.32□□□□□ -1.24
CAPN9-204ENST00000480004 RGS19P49795 217 aa7.32□□□□□ -1.24
CAPN9-204ENST00000480004 PROX2Q3B8N5 592 aa7.32□□□□□ -1.24
CAPN9-204ENST00000480004 NME9Q86XW9 330 aa7.32□□□□□ -1.24
CAPN9-204ENST00000480004 SPIRE2Q8WWL2 714 aa7.32□□□□□ -1.24
CAPN9-204ENST00000480004 ABHD8Q96I13 439 aa7.32□□□□□ -1.24
CAPN9-204ENST00000480004 ZBED2Q9BTP6 218 aa7.32□□□□□ -1.24
CAPN9-204ENST00000480004 KIF13BQ9NQT8 1826 aa7.31□□□□□ -1.24
CAPN9-204ENST00000480004 LOC102724428A0A0B4J2F2 783 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms