RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 OFD1O75665 1012 aa23.18■■□□□ 1.3
TNFRSF8-204ENST00000479933 ZNF790Q6PG37 636 aa23.18■■□□□ 1.3
TNFRSF8-204ENST00000479933 GPATCH3Q96I76 525 aa23.18■■□□□ 1.3
TNFRSF8-204ENST00000479933 KLHL40Q2TBA0 621 aa23.18■■□□□ 1.3
TNFRSF8-204ENST00000479933 TMX3Q96JJ7 454 aa23.18■■□□□ 1.3
TNFRSF8-204ENST00000479933 PHKG2P15735 406 aa23.17■■□□□ 1.3
TNFRSF8-204ENST00000479933 GRM8O00222 908 aa23.17■■□□□ 1.3
TNFRSF8-204ENST00000479933 HSPA4P34932 840 aa23.17■■□□□ 1.3
TNFRSF8-204ENST00000479933 CUL4AQ13619 759 aa23.17■■□□□ 1.3
TNFRSF8-204ENST00000479933 IFNL2Q8IZJ0 200 aa23.17■■□□□ 1.3
TNFRSF8-204ENST00000479933 INTS4Q96HW7 963 aaKnown RBP23.17■■□□□ 1.3
TNFRSF8-204ENST00000479933 KDM6AO15550 1401 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF8-204ENST00000479933 LARP1Q6PKG0 1096 aaKnown RBP23.16■■□□□ 1.3
TNFRSF8-204ENST00000479933 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF8-204ENST00000479933 CADPS2Q86UW7 1296 aa23.16■■□□□ 1.3
TNFRSF8-204ENST00000479933 PALD1Q9ULE6 856 aa23.16■■□□□ 1.3
TNFRSF8-204ENST00000479933 TNS3Q68CZ2 1445 aa23.16■■□□□ 1.3
TNFRSF8-204ENST00000479933 SGSM2O43147 1006 aa23.15■■□□□ 1.3
TNFRSF8-204ENST00000479933 RBM10P98175 930 aaKnown RBP23.15■■□□□ 1.3
TNFRSF8-204ENST00000479933 ZGPATQ8N5A5 531 aaKnown RBP23.15■■□□□ 1.3
TNFRSF8-204ENST00000479933 PPP1R9BQ96SB3 815 aa23.15■■□□□ 1.3
TNFRSF8-204ENST00000479933 MRC1P22897 1456 aa23.15■■□□□ 1.3
TNFRSF8-204ENST00000479933 C5P01031 1676 aa23.15■■□□□ 1.3
TNFRSF8-204ENST00000479933 STRCP1A6NGW2 1772 aa23.15■■□□□ 1.3
TNFRSF8-204ENST00000479933 PRAMEF22A3QJZ6 481 aa23.15■■□□□ 1.3
TNFRSF8-204ENST00000479933 PDIA6Q15084 440 aa23.15■■□□□ 1.3
TNFRSF8-204ENST00000479933 CCDC173Q0VFZ6 552 aa23.14■■□□□ 1.3
TNFRSF8-204ENST00000479933 RUFY2Q8WXA3 655 aa23.14■■□□□ 1.3
TNFRSF8-204ENST00000479933 DDX49Q9Y6V7 483 aaKnown RBP23.14■■□□□ 1.3
TNFRSF8-204ENST00000479933 RAD50Q92878 1312 aa23.14■■□□□ 1.29
TNFRSF8-204ENST00000479933 PKD1L3Q7Z443 1732 aa23.14■■□□□ 1.29
TNFRSF8-204ENST00000479933 NEXNQ0ZGT2 675 aa23.14■■□□□ 1.29
TNFRSF8-204ENST00000479933 CWF19L2Q2TBE0 894 aaKnown RBP23.14■■□□□ 1.29
TNFRSF8-204ENST00000479933 SMAP1Q8IYB5 467 aaPredicted RBP23.14■■□□□ 1.29
TNFRSF8-204ENST00000479933 ECHDC1Q9NTX5 307 aa23.14■■□□□ 1.29
TNFRSF8-204ENST00000479933 MEGF6O75095 1541 aa23.13■■□□□ 1.29
TNFRSF8-204ENST00000479933 CSB-PGBD3P0DP91 1061 aa23.13■■□□□ 1.29
TNFRSF8-204ENST00000479933 MTERF4Q7Z6M4 381 aaKnown RBP23.13■■□□□ 1.29
TNFRSF8-204ENST00000479933 DCAF5Q96JK2 942 aa23.13■■□□□ 1.29
TNFRSF8-204ENST00000479933 MCTP1Q6DN14 999 aa23.12■■□□□ 1.29
TNFRSF8-204ENST00000479933 RIC3Q7Z5B4 369 aa23.12■■□□□ 1.29
TNFRSF8-204ENST00000479933 ZSCAN30Q86W11 494 aa23.12■■□□□ 1.29
TNFRSF8-204ENST00000479933 IFIT2P09913 472 aaKnown RBP23.12■■□□□ 1.29
TNFRSF8-204ENST00000479933 MAP4K4O95819 1239 aaPredicted RBP23.11■■□□□ 1.29
TNFRSF8-204ENST00000479933 NFATC2IPQ8NCF5 419 aa23.11■■□□□ 1.29
TNFRSF8-204ENST00000479933 CPDO75976 1380 aa23.11■■□□□ 1.29
TNFRSF8-204ENST00000479933 AIMP1Q12904 312 aaKnown RBP23.1■■□□□ 1.29
TNFRSF8-204ENST00000479933 G3BP1Q13283 466 aaKnown RBP eCLIP23.1■■□□□ 1.29
TNFRSF8-204ENST00000479933 SUCLG2Q96I99 432 aa23.1■■□□□ 1.29
TNFRSF8-204ENST00000479933 SNRPA1P09661 255 aaKnown RBP23.09■■□□□ 1.29
TNFRSF8-204ENST00000479933 SLC39A6Q13433 755 aa23.09■■□□□ 1.29
TNFRSF8-204ENST00000479933 PKP1Q13835 747 aa23.09■■□□□ 1.29
TNFRSF8-204ENST00000479933 TTC5Q8N0Z6 440 aa23.09■■□□□ 1.29
TNFRSF8-204ENST00000479933 LSG1Q9H089 658 aaKnown RBP23.09■■□□□ 1.29
TNFRSF8-204ENST00000479933 DIAPH3Q9NSV4 1193 aa23.09■■□□□ 1.29
TNFRSF8-204ENST00000479933 IL25Q9H293 177 aa23.09■■□□□ 1.29
TNFRSF8-204ENST00000479933 LMBRD1Q9NUN5 540 aa23.09■■□□□ 1.29
TNFRSF8-204ENST00000479933 ZDHHC9Q9Y397 364 aa23.09■■□□□ 1.29
TNFRSF8-204ENST00000479933 SPATA31A3Q5VYP0 1347 aa23.08■■□□□ 1.29
TNFRSF8-204ENST00000479933 EVI5LQ96CN4 794 aa23.08■■□□□ 1.29
TNFRSF8-204ENST00000479933 PARP4Q9UKK3 1724 aaKnown RBP23.08■■□□□ 1.29
TNFRSF8-204ENST00000479933 METTL22Q9BUU2 404 aaPredicted RBP23.08■■□□□ 1.28
TNFRSF8-204ENST00000479933 BICC1Q9H694 974 aaKnown RBP23.08■■□□□ 1.28
TNFRSF8-204ENST00000479933 IGKV5-2P06315 115 aa23.07■■□□□ 1.28
TNFRSF8-204ENST00000479933 KAZALD1Q96I82 304 aa23.07■■□□□ 1.28
TNFRSF8-204ENST00000479933 FMNL2Q96PY5 1086 aa23.07■■□□□ 1.28
TNFRSF8-204ENST00000479933 NEURL1BA8MQ27 555 aa23.06■■□□□ 1.28
TNFRSF8-204ENST00000479933 HIP1O00291 1037 aa23.06■■□□□ 1.28
TNFRSF8-204ENST00000479933 HS1BP3Q53T59 392 aa23.06■■□□□ 1.28
TNFRSF8-204ENST00000479933 AACSQ86V21 672 aa23.06■■□□□ 1.28
TNFRSF8-204ENST00000479933 XAGE3Q8WTP9 111 aa23.06■■□□□ 1.28
TNFRSF8-204ENST00000479933 ZNF496Q96IT1 587 aaPredicted RBP23.06■■□□□ 1.28
TNFRSF8-204ENST00000479933 PA2G4Q9UQ80 394 aaKnown RBP23.06■■□□□ 1.28
TNFRSF8-204ENST00000479933 BRD1O95696 1058 aa23.06■■□□□ 1.28
TNFRSF8-204ENST00000479933 CWC27Q6UX04 472 aaKnown RBP23.06■■□□□ 1.28
TNFRSF8-204ENST00000479933 DDX17Q92841 729 aaKnown RBP23.06■■□□□ 1.28
TNFRSF8-204ENST00000479933 SNX14Q9Y5W7 946 aa23.06■■□□□ 1.28
TNFRSF8-204ENST00000479933 GCKRQ14397 625 aa23.05■■□□□ 1.28
TNFRSF8-204ENST00000479933 UPF3BQ9BZI7 483 aaKnown RBP23.05■■□□□ 1.28
TNFRSF8-204ENST00000479933 MYL6BP14649 208 aa23.05■■□□□ 1.28
TNFRSF8-204ENST00000479933 COPS6Q7L5N1 327 aa23.05■■□□□ 1.28
TNFRSF8-204ENST00000479933 LAMB4A4D0S4 1761 aa23.04■■□□□ 1.28
TNFRSF8-204ENST00000479933 ANKRD13DQ6ZTN6 518 aa23.04■■□□□ 1.28
TNFRSF8-204ENST00000479933 GAS2L3Q86XJ1 694 aa23.04■■□□□ 1.28
TNFRSF8-204ENST00000479933 CYP27B1O15528 508 aa23.03■■□□□ 1.28
TNFRSF8-204ENST00000479933 CABLES1Q8TDN4 633 aa23.03■■□□□ 1.28
TNFRSF8-204ENST00000479933 COL15A1P39059 1388 aa23.03■■□□□ 1.28
TNFRSF8-204ENST00000479933 SASH1O94885 1247 aa23.03■■□□□ 1.28
TNFRSF8-204ENST00000479933 ZNF445P59923 1031 aa23.03■■□□□ 1.28
TNFRSF8-204ENST00000479933 CABP4P57796 275 aa23.02■■□□□ 1.28
TNFRSF8-204ENST00000479933 MYD88Q99836 296 aa23.02■■□□□ 1.28
TNFRSF8-204ENST00000479933 CHRNA2Q15822 529 aa23.02■■□□□ 1.28
TNFRSF8-204ENST00000479933 AFDNP55196 1824 aaKnown RBP23.01■■□□□ 1.27
TNFRSF8-204ENST00000479933 PRPF40AO75400 957 aaKnown RBP23.01■■□□□ 1.27
TNFRSF8-204ENST00000479933 LRP10Q7Z4F1 713 aa23.01■■□□□ 1.27
TNFRSF8-204ENST00000479933 TTC14Q96N46 770 aa23■■□□□ 1.27
TNFRSF8-204ENST00000479933 UTP14CQ5TAP6 766 aaKnown RBP23■■□□□ 1.27
TNFRSF8-204ENST00000479933 NOL8Q76FK4 1167 aaKnown RBP23■■□□□ 1.27
TNFRSF8-204ENST00000479933 KCNB2Q92953 911 aa23■■□□□ 1.27
TNFRSF8-204ENST00000479933 EAF2Q96CJ1 260 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms