RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 FLAD1Q8NFF5 587 aa15.98■□□□□ 0.15
TRAPPC12-218ENST00000479897 PLBD2Q8NHP8 589 aa15.98■□□□□ 0.15
TRAPPC12-218ENST00000479897 AFDNP55196 1824 aaKnown RBP15.98■□□□□ 0.15
TRAPPC12-218ENST00000479897 MAP3K15Q6ZN16 1313 aa15.97■□□□□ 0.15
TRAPPC12-218ENST00000479897 COL24A1Q17RW2 1714 aa15.97■□□□□ 0.15
TRAPPC12-218ENST00000479897 ERVV-1B6SEH8 477 aa15.97■□□□□ 0.15
TRAPPC12-218ENST00000479897 SLC15A2Q16348 729 aa15.97■□□□□ 0.15
TRAPPC12-218ENST00000479897 KSR2Q6VAB6 950 aa15.97■□□□□ 0.15
TRAPPC12-218ENST00000479897 KIF6Q6ZMV9 814 aa15.97■□□□□ 0.15
TRAPPC12-218ENST00000479897 TTLL7Q6ZT98 887 aa15.97■□□□□ 0.15
TRAPPC12-218ENST00000479897 DZIP3Q86Y13 1208 aaKnown RBP15.97■□□□□ 0.15
TRAPPC12-218ENST00000479897 STK32BQ9NY57 414 aa15.97■□□□□ 0.15
TRAPPC12-218ENST00000479897 CASZ1Q86V15 1759 aa15.97■□□□□ 0.15
TRAPPC12-218ENST00000479897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.96■□□□□ 0.15
TRAPPC12-218ENST00000479897 MS4A1P11836 297 aa15.96■□□□□ 0.15
TRAPPC12-218ENST00000479897 PDE3AQ14432 1141 aa15.96■□□□□ 0.15
TRAPPC12-218ENST00000479897 ANKRD13DQ6ZTN6 518 aa15.96■□□□□ 0.15
TRAPPC12-218ENST00000479897 FRAT1Q92837 279 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC12-218ENST00000479897 NARFQ9UHQ1 456 aa15.96■□□□□ 0.15
TRAPPC12-218ENST00000479897 PNPLA7Q6ZV29 1317 aa15.95■□□□□ 0.14
TRAPPC12-218ENST00000479897 USP42Q9H9J4 1324 aaKnown RBP15.95■□□□□ 0.14
TRAPPC12-218ENST00000479897 PI4KAP2A4QPH2 592 aa15.95■□□□□ 0.14
TRAPPC12-218ENST00000479897 CAMTA2O94983 1202 aa15.95■□□□□ 0.14
TRAPPC12-218ENST00000479897 AIMP1Q12904 312 aaKnown RBP15.95■□□□□ 0.14
TRAPPC12-218ENST00000479897 TRAPPC3LQ5T215 181 aa15.95■□□□□ 0.14
TRAPPC12-218ENST00000479897 PI4KAP1Q8N8J0 262 aa15.95■□□□□ 0.14
TRAPPC12-218ENST00000479897 DNAAF4Q8WXU2 420 aa15.95■□□□□ 0.14
TRAPPC12-218ENST00000479897 ZNF330Q9Y3S2 320 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC12-218ENST00000479897 SUPT16HQ9Y5B9 1047 aaKnown RBP15.95■□□□□ 0.14
TRAPPC12-218ENST00000479897 CLEC4GQ6UXB4 293 aa15.94■□□□□ 0.14
TRAPPC12-218ENST00000479897 GIGYF2Q6Y7W6 1299 aaKnown RBP15.94■□□□□ 0.14
TRAPPC12-218ENST00000479897 ARHGEF1Q92888 912 aaKnown RBP15.94■□□□□ 0.14
TRAPPC12-218ENST00000479897 TFCP2L1Q9NZI6 479 aa15.94■□□□□ 0.14
TRAPPC12-218ENST00000479897 MAP3K2Q9Y2U5 619 aa15.94■□□□□ 0.14
TRAPPC12-218ENST00000479897 PLIN1O60240 522 aa15.93■□□□□ 0.14
TRAPPC12-218ENST00000479897 HSP90AB3PQ58FF7 597 aa15.93■□□□□ 0.14
TRAPPC12-218ENST00000479897 RIC3Q7Z5B4 369 aa15.93■□□□□ 0.14
TRAPPC12-218ENST00000479897 DZIP1LQ8IYY4 767 aaKnown RBP15.93■□□□□ 0.14
TRAPPC12-218ENST00000479897 METTL22Q9BUU2 404 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC12-218ENST00000479897 TBC1D2BQ9UPU7 963 aa15.93■□□□□ 0.14
TRAPPC12-218ENST00000479897 F6X3S4 739 aa15.92■□□□□ 0.14
TRAPPC12-218ENST00000479897 PHF14O94880 888 aa15.92■□□□□ 0.14
TRAPPC12-218ENST00000479897 RFC4P35249 363 aa15.92■□□□□ 0.14
TRAPPC12-218ENST00000479897 INTS3Q68E01 1043 aaKnown RBP15.92■□□□□ 0.14
TRAPPC12-218ENST00000479897 FTSJ3Q8IY81 847 aaKnown RBP15.92■□□□□ 0.14
TRAPPC12-218ENST00000479897 ZBTB3Q9H5J0 574 aa15.92■□□□□ 0.14
TRAPPC12-218ENST00000479897 TNNQ9UQP3 1299 aa15.92■□□□□ 0.14
TRAPPC12-218ENST00000479897 ZNF652Q9Y2D9 606 aa15.92■□□□□ 0.14
TRAPPC12-218ENST00000479897 CCT4P50991 539 aaKnown RBP15.91■□□□□ 0.14
TRAPPC12-218ENST00000479897 BEND3Q5T5X7 828 aa15.91■□□□□ 0.14
TRAPPC12-218ENST00000479897 BCL2L12Q9HB09 334 aa15.91■□□□□ 0.14
TRAPPC12-218ENST00000479897 LAMB2P55268 1798 aa15.9■□□□□ 0.14
TRAPPC12-218ENST00000479897 ZPR1O75312 459 aa15.9■□□□□ 0.14
TRAPPC12-218ENST00000479897 ALDH1L1O75891 902 aa15.9■□□□□ 0.14
TRAPPC12-218ENST00000479897 RLBP1P12271 317 aa15.9■□□□□ 0.14
TRAPPC12-218ENST00000479897 NEXNQ0ZGT2 675 aa15.9■□□□□ 0.14
TRAPPC12-218ENST00000479897 TRIM28Q13263 835 aaKnown RBP15.9■□□□□ 0.14
TRAPPC12-218ENST00000479897 TCIRG1Q13488 830 aa15.9■□□□□ 0.14
TRAPPC12-218ENST00000479897 HLFQ16534 295 aa15.9■□□□□ 0.14
TRAPPC12-218ENST00000479897 COL23A1Q86Y22 540 aaPredicted RBP15.9■□□□□ 0.14
TRAPPC12-218ENST00000479897 LINS1Q8NG48 757 aa15.9■□□□□ 0.14
TRAPPC12-218ENST00000479897 ISCA1Q9BUE6 129 aa15.9■□□□□ 0.14
TRAPPC12-218ENST00000479897 NRXN2Q9P2S2 1712 aa15.9■□□□□ 0.14
TRAPPC12-218ENST00000479897 USPL1Q5W0Q7 1092 aa15.89■□□□□ 0.13
TRAPPC12-218ENST00000479897 SMIM5Q71RC9 77 aa15.89■□□□□ 0.13
TRAPPC12-218ENST00000479897 ZNF34Q8IZ26 560 aa15.89■□□□□ 0.13
TRAPPC12-218ENST00000479897 CLUAP1Q96AJ1 413 aa15.89■□□□□ 0.13
TRAPPC12-218ENST00000479897 SRP68Q9UHB9 627 aaKnown RBP15.89■□□□□ 0.13
TRAPPC12-218ENST00000479897 IGKV5-2P06315 115 aa15.88■□□□□ 0.13
TRAPPC12-218ENST00000479897 GYS1P13807 737 aa15.88■□□□□ 0.13
TRAPPC12-218ENST00000479897 C20orf194Q5TEA3 1177 aa15.88■□□□□ 0.13
TRAPPC12-218ENST00000479897 TMEM57Q8N5G2 664 aa15.88■□□□□ 0.13
TRAPPC12-218ENST00000479897 PANK1Q8TE04 598 aa15.88■□□□□ 0.13
TRAPPC12-218ENST00000479897 MYD88Q99836 296 aa15.88■□□□□ 0.13
TRAPPC12-218ENST00000479897 SRCIN1Q9C0H9 1055 aa15.88■□□□□ 0.13
TRAPPC12-218ENST00000479897 NEURL1BA8MQ27 555 aa15.87■□□□□ 0.13
TRAPPC12-218ENST00000479897 MVPQ14764 893 aaKnown RBP15.87■□□□□ 0.13
TRAPPC12-218ENST00000479897 PARP10Q53GL7 1025 aa15.87■□□□□ 0.13
TRAPPC12-218ENST00000479897 SLC4A10Q6U841 1118 aa15.87■□□□□ 0.13
TRAPPC12-218ENST00000479897 CCDC191Q8NCU4 936 aa15.87■□□□□ 0.13
TRAPPC12-218ENST00000479897 SLC16A10Q8TF71 515 aa15.87■□□□□ 0.13
TRAPPC12-218ENST00000479897 ARXQ96QS3 562 aa15.87■□□□□ 0.13
TRAPPC12-218ENST00000479897 DDX19BQ9UMR2 479 aa15.86■□□□□ 0.13
TRAPPC12-218ENST00000479897 UBN2Q6ZU65 1347 aa15.86■□□□□ 0.13
TRAPPC12-218ENST00000479897 CARMIL3Q8ND23 1372 aa15.86■□□□□ 0.13
TRAPPC12-218ENST00000479897 SOCS7O14512 581 aa15.85■□□□□ 0.13
TRAPPC12-218ENST00000479897 FKBP8Q14318 412 aa15.85■□□□□ 0.13
TRAPPC12-218ENST00000479897 CWF19L2Q2TBE0 894 aaKnown RBP15.85■□□□□ 0.13
TRAPPC12-218ENST00000479897 NLRP10Q86W26 655 aa15.85■□□□□ 0.13
TRAPPC12-218ENST00000479897 NLGN1Q8N2Q7 840 aa15.85■□□□□ 0.13
TRAPPC12-218ENST00000479897 MYH3P11055 1940 aa15.85■□□□□ 0.13
TRAPPC12-218ENST00000479897 UTYO14607 1347 aa15.85■□□□□ 0.13
TRAPPC12-218ENST00000479897 DDX60Q8IY21 1712 aaKnown RBP15.85■□□□□ 0.13
TRAPPC12-218ENST00000479897 GCKRQ14397 625 aa15.84■□□□□ 0.13
TRAPPC12-218ENST00000479897 TBC1D9BQ66K14 1250 aa15.84■□□□□ 0.13
TRAPPC12-218ENST00000479897 ITPRIPQ8IWB1 547 aa15.84■□□□□ 0.13
TRAPPC12-218ENST00000479897 CHMP4BQ9H444 224 aaKnown RBP15.84■□□□□ 0.13
TRAPPC12-218ENST00000479897 CWC25Q9NXE8 425 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC12-218ENST00000479897 RIC1Q4ADV7 1423 aa15.84■□□□□ 0.13
TRAPPC12-218ENST00000479897 ATP5J2-PTCD1G3V325 749 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms