RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 MEIS3Q99687 375 aa15.03■□□□□ -0
TM9SF4-206ENST00000479591 METTL22Q9BUU2 404 aaPredicted RBP15.03■□□□□ -0
TM9SF4-206ENST00000479591 ITPK1Q13572 414 aa15.02■□□□□ -0
TM9SF4-206ENST00000479591 KIF6Q6ZMV9 814 aa15.02■□□□□ -0
TM9SF4-206ENST00000479591 NPM2Q86SE8 214 aaKnown RBP15.02■□□□□ -0
TM9SF4-206ENST00000479591 CCDC87Q9NVE4 849 aa15.02■□□□□ -0
TM9SF4-206ENST00000479591 HDAC5Q9UQL6 1122 aa15.02■□□□□ -0
TM9SF4-206ENST00000479591 GNAI2P04899 355 aa15.01□□□□□ -0.01
TM9SF4-206ENST00000479591 TTLL7Q6ZT98 887 aa15.01□□□□□ -0.01
TM9SF4-206ENST00000479591 PTF1AQ7RTS3 328 aa15.01□□□□□ -0.01
TM9SF4-206ENST00000479591 RPAP2Q8IXW5 612 aaPredicted RBP15.01□□□□□ -0.01
TM9SF4-206ENST00000479591 USP44Q9H0E7 712 aa15.01□□□□□ -0.01
TM9SF4-206ENST00000479591 ZBTB1Q9Y2K1 713 aa15.01□□□□□ -0.01
TM9SF4-206ENST00000479591 IGHDP01880 384 aa15□□□□□ -0.01
TM9SF4-206ENST00000479591 UBTFL1P0CB47 393 aaPredicted RBP15□□□□□ -0.01
TM9SF4-206ENST00000479591 HMGB2P26583 209 aaKnown RBP15□□□□□ -0.01
TM9SF4-206ENST00000479591 CRKLP46109 303 aaKnown RBP15□□□□□ -0.01
TM9SF4-206ENST00000479591 INTS5Q6P9B9 1019 aaKnown RBP15□□□□□ -0.01
TM9SF4-206ENST00000479591 MYD88Q99836 296 aa15□□□□□ -0.01
TM9SF4-206ENST00000479591 C1orf115Q9H7X2 142 aa15□□□□□ -0.01
TM9SF4-206ENST00000479591 AFDNP55196 1824 aaKnown RBP14.99□□□□□ -0.01
TM9SF4-206ENST00000479591 CNTNAP4Q9C0A0 1308 aa14.99□□□□□ -0.01
TM9SF4-206ENST00000479591 NEURL1BA8MQ27 555 aa14.99□□□□□ -0.01
TM9SF4-206ENST00000479591 MAP3K15Q6ZN16 1313 aa14.98□□□□□ -0.01
TM9SF4-206ENST00000479591 IGKV5-2P06315 115 aa14.98□□□□□ -0.01
TM9SF4-206ENST00000479591 EIF5P55010 431 aaKnown RBP14.98□□□□□ -0.01
TM9SF4-206ENST00000479591 RC3H1Q5TC82 1133 aaKnown RBP14.98□□□□□ -0.01
TM9SF4-206ENST00000479591 CEP85Q6P2H3 762 aa14.98□□□□□ -0.01
TM9SF4-206ENST00000479591 ANKRD44Q8N8A2 993 aa14.98□□□□□ -0.01
TM9SF4-206ENST00000479591 C9orf78Q9NZ63 289 aaPredicted RBP14.98□□□□□ -0.01
TM9SF4-206ENST00000479591 CCNL1Q9UK58 526 aaPredicted RBP14.98□□□□□ -0.01
TM9SF4-206ENST00000479591 ZNF330Q9Y3S2 320 aaPredicted RBP14.98□□□□□ -0.01
TM9SF4-206ENST00000479591 TAF1LQ8IZX4 1826 aa14.98□□□□□ -0.01
TM9SF4-206ENST00000479591 UTYO14607 1347 aa14.97□□□□□ -0.01
TM9SF4-206ENST00000479591 MYH14Q7Z406 1995 aaKnown RBP14.97□□□□□ -0.01
TM9SF4-206ENST00000479591 ERVV-1B6SEH8 477 aa14.97□□□□□ -0.01
TM9SF4-206ENST00000479591 GRM8O00222 908 aa14.97□□□□□ -0.01
TM9SF4-206ENST00000479591 HMMRO75330 724 aa14.97□□□□□ -0.01
TM9SF4-206ENST00000479591 TRIM37O94972 964 aa14.97□□□□□ -0.01
TM9SF4-206ENST00000479591 GCKRQ14397 625 aa14.97□□□□□ -0.01
TM9SF4-206ENST00000479591 CWF19L2Q2TBE0 894 aaKnown RBP14.97□□□□□ -0.01
TM9SF4-206ENST00000479591 HSP90AB3PQ58FF7 597 aa14.97□□□□□ -0.01
TM9SF4-206ENST00000479591 LINC00116Q8NCU8 138 aa14.97□□□□□ -0.01
TM9SF4-206ENST00000479591 ZBTB3Q9H5J0 574 aa14.97□□□□□ -0.01
TM9SF4-206ENST00000479591 A0A087WZG4 1122 aa14.96□□□□□ -0.01
TM9SF4-206ENST00000479591 SLC27A3Q5K4L6 730 aa14.96□□□□□ -0.01
TM9SF4-206ENST00000479591 GCC1Q96CN9 775 aa14.96□□□□□ -0.01
TM9SF4-206ENST00000479591 ANKRD36CQ5JPF3 1778 aa14.96□□□□□ -0.02
TM9SF4-206ENST00000479591 NBPF7P0C2Y1 421 aaPredicted RBP14.95□□□□□ -0.02
TM9SF4-206ENST00000479591 TRIM28Q13263 835 aaKnown RBP14.95□□□□□ -0.02
TM9SF4-206ENST00000479591 TCIRG1Q13488 830 aa14.95□□□□□ -0.02
TM9SF4-206ENST00000479591 GIGYF2Q6Y7W6 1299 aaKnown RBP14.95□□□□□ -0.02
TM9SF4-206ENST00000479591 DZIP3Q86Y13 1208 aaKnown RBP14.95□□□□□ -0.02
TM9SF4-206ENST00000479591 SIRT2Q8IXJ6 389 aa14.95□□□□□ -0.02
TM9SF4-206ENST00000479591 SMC5Q8IY18 1101 aa14.95□□□□□ -0.02
TM9SF4-206ENST00000479591 CCDC191Q8NCU4 936 aa14.95□□□□□ -0.02
TM9SF4-206ENST00000479591 LRRFIP2Q9Y608 721 aaKnown RBP14.95□□□□□ -0.02
TM9SF4-206ENST00000479591 ARXQ96QS3 562 aa14.94□□□□□ -0.02
TM9SF4-206ENST00000479591 ISCA1Q9BUE6 129 aa14.94□□□□□ -0.02
TM9SF4-206ENST00000479591 CWC25Q9NXE8 425 aaPredicted RBP14.94□□□□□ -0.02
TM9SF4-206ENST00000479591 COL15A1P39059 1388 aa14.94□□□□□ -0.02
TM9SF4-206ENST00000479591 C4BP0C0L5 1744 aa14.94□□□□□ -0.02
TM9SF4-206ENST00000479591 NUP98P52948 1817 aa14.94□□□□□ -0.02
TM9SF4-206ENST00000479591 ATP5J2-PTCD1G3V325 749 aa14.93□□□□□ -0.02
TM9SF4-206ENST00000479591 RGL2O15211 777 aa14.93□□□□□ -0.02
TM9SF4-206ENST00000479591 ATP8B2P98198 1209 aa14.93□□□□□ -0.02
TM9SF4-206ENST00000479591 BCORQ6W2J9 1755 aa14.93□□□□□ -0.02
TM9SF4-206ENST00000479591 PLSCR1O15162 318 aa14.92□□□□□ -0.02
TM9SF4-206ENST00000479591 RPS6KA4O75676 772 aa14.92□□□□□ -0.02
TM9SF4-206ENST00000479591 TBC1D2BQ9UPU7 963 aa14.92□□□□□ -0.02
TM9SF4-206ENST00000479591 RGPD3A6NKT7 1758 aaPredicted RBP14.92□□□□□ -0.02
TM9SF4-206ENST00000479591 RGPD4Q7Z3J3 1758 aa14.92□□□□□ -0.02
TM9SF4-206ENST00000479591 TNS1Q9HBL0 1735 aaKnown RBP14.92□□□□□ -0.02
TM9SF4-206ENST00000479591 KCNQ4P56696 695 aa14.91□□□□□ -0.02
TM9SF4-206ENST00000479591 MTX1Q13505 466 aa14.91□□□□□ -0.02
TM9SF4-206ENST00000479591 DCTPP1Q9H773 170 aa14.91□□□□□ -0.02
TM9SF4-206ENST00000479591 ZNF652Q9Y2D9 606 aa14.91□□□□□ -0.02
TM9SF4-206ENST00000479591 H7C1W4 665 aa14.9□□□□□ -0.02
TM9SF4-206ENST00000479591 CAMTA2O94983 1202 aa14.9□□□□□ -0.02
TM9SF4-206ENST00000479591 HLFQ16534 295 aa14.9□□□□□ -0.02
TM9SF4-206ENST00000479591 SSH3Q8TE77 659 aa14.9□□□□□ -0.02
TM9SF4-206ENST00000479591 RTCBQ9Y3I0 505 aaKnown RBP14.9□□□□□ -0.02
TM9SF4-206ENST00000479591 SCN7AQ01118 1682 aa14.9□□□□□ -0.02
TM9SF4-206ENST00000479591 GNPATO15228 680 aa14.89□□□□□ -0.03
TM9SF4-206ENST00000479591 APBA3O96018 575 aa14.89□□□□□ -0.03
TM9SF4-206ENST00000479591 CASP7P55210 303 aa14.89□□□□□ -0.03
TM9SF4-206ENST00000479591 NUCB1Q02818 461 aa14.89□□□□□ -0.03
TM9SF4-206ENST00000479591 CLEC4GQ6UXB4 293 aa14.89□□□□□ -0.03
TM9SF4-206ENST00000479591 SUCLG2Q96I99 432 aa14.89□□□□□ -0.03
TM9SF4-206ENST00000479591 AK7Q96M32 723 aa14.89□□□□□ -0.03
TM9SF4-206ENST00000479591 LRRC4BQ9NT99 713 aa14.89□□□□□ -0.03
TM9SF4-206ENST00000479591 PDZRN3Q9UPQ7 1066 aa14.89□□□□□ -0.03
TM9SF4-206ENST00000479591 PNMA6EA0A0J9YXQ4 647 aa14.88□□□□□ -0.03
TM9SF4-206ENST00000479591 SRGAP3O43295 1099 aa14.88□□□□□ -0.03
TM9SF4-206ENST00000479591 ADRA2BP18089 450 aa14.88□□□□□ -0.03
TM9SF4-206ENST00000479591 POLA2Q14181 598 aa14.88□□□□□ -0.03
TM9SF4-206ENST00000479591 TXNRD1Q16881 649 aa14.88□□□□□ -0.03
TM9SF4-206ENST00000479591 UBE3BQ7Z3V4 1068 aa14.88□□□□□ -0.03
TM9SF4-206ENST00000479591 PPP1R42Q7Z4L9 355 aa14.88□□□□□ -0.03
TM9SF4-206ENST00000479591 NLRP10Q86W26 655 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms