RNA–Protein interactions for RNA: ENST00000479413.1

C9orf85-205, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 1 (best)

Gene C9orf85, Length 902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-205ENST00000479413 SOGA3Q5TF21 947 aa19■□□□□ 0.63
C9orf85-205ENST00000479413 STYK1Q6J9G0 422 aa19■□□□□ 0.63
C9orf85-205ENST00000479413 MCM10Q7L590 875 aa19■□□□□ 0.63
C9orf85-205ENST00000479413 JMYQ8N9B5 988 aa19■□□□□ 0.63
C9orf85-205ENST00000479413 TAOK3Q9H2K8 898 aa19■□□□□ 0.63
C9orf85-205ENST00000479413 USP16Q9Y5T5 823 aa19■□□□□ 0.63
C9orf85-205ENST00000479413 FER1L6Q2WGJ9 1857 aa19■□□□□ 0.63
C9orf85-205ENST00000479413 PPP2R1AP30153 589 aa18.99■□□□□ 0.63
C9orf85-205ENST00000479413 CLEC4GQ6UXB4 293 aa18.99■□□□□ 0.63
C9orf85-205ENST00000479413 NBPF5PQ86XG9 351 aaPredicted RBP18.99■□□□□ 0.63
C9orf85-205ENST00000479413 MASTLQ96GX5 879 aa18.99■□□□□ 0.63
C9orf85-205ENST00000479413 LTBP3Q9NS15 1303 aa18.99■□□□□ 0.63
C9orf85-205ENST00000479413 DICER1Q9UPY3 1922 aaKnown RBP18.98■□□□□ 0.63
C9orf85-205ENST00000479413 SRGNP10124 158 aa18.98■□□□□ 0.63
C9orf85-205ENST00000479413 PIP4K2AP48426 406 aaPredicted RBP18.98■□□□□ 0.63
C9orf85-205ENST00000479413 PRPF40BQ6NWY9 871 aaKnown RBP18.98■□□□□ 0.63
C9orf85-205ENST00000479413 CACNA1SQ13698 1873 aa18.97■□□□□ 0.63
C9orf85-205ENST00000479413 ARFGEF2Q9Y6D5 1785 aa18.97■□□□□ 0.63
C9orf85-205ENST00000479413 HTATSF1O43719 755 aaKnown RBP18.97■□□□□ 0.63
C9orf85-205ENST00000479413 SLX4Q8IY92 1834 aa18.96■□□□□ 0.63
C9orf85-205ENST00000479413 PRAMEF22A3QJZ6 481 aa18.96■□□□□ 0.63
C9orf85-205ENST00000479413 NEFMP07197 916 aa18.96■□□□□ 0.63
C9orf85-205ENST00000479413 RGL2O15211 777 aa18.95■□□□□ 0.62
C9orf85-205ENST00000479413 DCTN1Q14203 1278 aa18.94■□□□□ 0.62
C9orf85-205ENST00000479413 TPTE2Q6XPS3 522 aa18.94■□□□□ 0.62
C9orf85-205ENST00000479413 NIP7Q9Y221 180 aaKnown RBP eCLIP18.94■□□□□ 0.62
C9orf85-205ENST00000479413 POTECB2RU33 542 aa18.93■□□□□ 0.62
C9orf85-205ENST00000479413 NPR1P16066 1061 aa18.93■□□□□ 0.62
C9orf85-205ENST00000479413 TAF7Q15545 349 aaPredicted RBP18.93■□□□□ 0.62
C9orf85-205ENST00000479413 CCDC93Q567U6 631 aa18.92■□□□□ 0.62
C9orf85-205ENST00000479413 LAMB4A4D0S4 1761 aa18.91■□□□□ 0.62
C9orf85-205ENST00000479413 NBPF26B4DH59 902 aa18.91■□□□□ 0.62
C9orf85-205ENST00000479413 NBPF10Q6P3W6 841 aaKnown RBP18.91■□□□□ 0.62
C9orf85-205ENST00000479413 NBPF15Q8N660 670 aa18.91■□□□□ 0.62
C9orf85-205ENST00000479413 GTF2E1P29083 439 aaPredicted RBP18.9■□□□□ 0.62
C9orf85-205ENST00000479413 KLRG2A4D1S0 409 aaPredicted RBP18.89■□□□□ 0.61
C9orf85-205ENST00000479413 IQCA1LA6NCM1 817 aa18.89■□□□□ 0.61
C9orf85-205ENST00000479413 DDNO94850 711 aaPredicted RBP18.89■□□□□ 0.61
C9orf85-205ENST00000479413 CHADLQ6NUI6 762 aa18.89■□□□□ 0.61
C9orf85-205ENST00000479413 PNISRQ8TF01 805 aaKnown RBP18.89■□□□□ 0.61
C9orf85-205ENST00000479413 FAM177BA6PVY3 158 aa18.88■□□□□ 0.61
C9orf85-205ENST00000479413 C7orf43Q8WVR3 580 aa18.88■□□□□ 0.61
C9orf85-205ENST00000479413 MIS18AQ9NYP9 233 aa18.88■□□□□ 0.61
C9orf85-205ENST00000479413 FKBP4Q02790 459 aaKnown RBP eCLIP18.87■□□□□ 0.61
C9orf85-205ENST00000479413 COL13A1Q5TAT6 717 aaPredicted RBP18.87■□□□□ 0.61
C9orf85-205ENST00000479413 RTKN2Q8IZC4 609 aa18.87■□□□□ 0.61
C9orf85-205ENST00000479413 KDM3BQ7LBC6 1761 aa18.86■□□□□ 0.61
C9orf85-205ENST00000479413 ALDH1B1P30837 517 aa18.86■□□□□ 0.61
C9orf85-205ENST00000479413 HLFQ16534 295 aa18.86■□□□□ 0.61
C9orf85-205ENST00000479413 NYXQ9GZU5 481 aa18.86■□□□□ 0.61
C9orf85-205ENST00000479413 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
C9orf85-205ENST00000479413 SCN4AP35499 1836 aa18.86■□□□□ 0.61
C9orf85-205ENST00000479413 PCNTO95613 3336 aa18.85■□□□□ 0.61
C9orf85-205ENST00000479413 KIF6Q6ZMV9 814 aa18.85■□□□□ 0.61
C9orf85-205ENST00000479413 NGEFQ8N5V2 710 aa18.85■□□□□ 0.61
C9orf85-205ENST00000479413 L3MBTL3Q96JM7 780 aaPredicted RBP18.85■□□□□ 0.61
C9orf85-205ENST00000479413 PNNQ9H307 717 aaKnown RBP18.85■□□□□ 0.61
C9orf85-205ENST00000479413 CREBZFQ9NS37 354 aa18.85■□□□□ 0.61
C9orf85-205ENST00000479413 MAPK8IP3Q9UPT6 1336 aa18.84■□□□□ 0.61
C9orf85-205ENST00000479413 ERVV-1B6SEH8 477 aa18.84■□□□□ 0.61
C9orf85-205ENST00000479413 LDHDQ86WU2 507 aa18.84■□□□□ 0.61
C9orf85-205ENST00000479413 ZNF277Q9NRM2 450 aaPredicted RBP18.84■□□□□ 0.61
C9orf85-205ENST00000479413 MAP3K15Q6ZN16 1313 aa18.83■□□□□ 0.61
C9orf85-205ENST00000479413 POTEIP0CG38 1075 aa18.83■□□□□ 0.6
C9orf85-205ENST00000479413 POTEJP0CG39 1038 aa18.83■□□□□ 0.6
C9orf85-205ENST00000479413 HSPA1AP0DMV8 641 aaKnown RBP18.83■□□□□ 0.6
C9orf85-205ENST00000479413 HSPA1BP0DMV9 641 aaKnown RBP18.83■□□□□ 0.6
C9orf85-205ENST00000479413 NFE2L2Q16236 605 aa18.83■□□□□ 0.6
C9orf85-205ENST00000479413 RRP7AQ9Y3A4 280 aaKnown RBP18.83■□□□□ 0.6
C9orf85-205ENST00000479413 EIF4A1P60842 406 aaKnown RBP18.82■□□□□ 0.6
C9orf85-205ENST00000479413 OLFM4Q6UX06 510 aa18.82■□□□□ 0.6
C9orf85-205ENST00000479413 TNS4Q8IZW8 715 aa18.82■□□□□ 0.6
C9orf85-205ENST00000479413 TAF1DQ9H5J8 278 aaPredicted RBP18.82■□□□□ 0.6
C9orf85-205ENST00000479413 NUP98P52948 1817 aa18.81■□□□□ 0.6
C9orf85-205ENST00000479413 ZNF541Q9H0D2 1346 aa18.81■□□□□ 0.6
C9orf85-205ENST00000479413 IARSP41252 1262 aaKnown RBP18.81■□□□□ 0.6
C9orf85-205ENST00000479413 CRY2Q49AN0 593 aa18.81■□□□□ 0.6
C9orf85-205ENST00000479413 RPGRQ92834 1020 aaKnown RBP18.81■□□□□ 0.6
C9orf85-205ENST00000479413 PLEKHF1Q96S99 279 aa18.81■□□□□ 0.6
C9orf85-205ENST00000479413 ABCC12Q96J65 1359 aa18.81■□□□□ 0.6
C9orf85-205ENST00000479413 IBTKQ9P2D0 1353 aaPredicted RBP18.81■□□□□ 0.6
C9orf85-205ENST00000479413 MYL6BP14649 208 aa18.8■□□□□ 0.6
C9orf85-205ENST00000479413 EAPPQ56P03 285 aaPredicted RBP18.8■□□□□ 0.6
C9orf85-205ENST00000479413 CC2D2BQ6DHV5 1058 aa18.8■□□□□ 0.6
C9orf85-205ENST00000479413 NUTM1Q86Y26 1132 aa18.8■□□□□ 0.6
C9orf85-205ENST00000479413 THUMPD2Q9BTF0 503 aaKnown RBP18.8■□□□□ 0.6
C9orf85-205ENST00000479413 HACL1Q9UJ83 578 aa18.8■□□□□ 0.6
C9orf85-205ENST00000479413 SYNE4Q8N205 404 aa18.79■□□□□ 0.6
C9orf85-205ENST00000479413 JDP2Q8WYK2 163 aa18.79■□□□□ 0.6
C9orf85-205ENST00000479413 PSMD1Q99460 953 aa18.79■□□□□ 0.6
C9orf85-205ENST00000479413 ZBTB3Q9H5J0 574 aa18.79■□□□□ 0.6
C9orf85-205ENST00000479413 MKRN1Q9UHC7 482 aaKnown RBP18.79■□□□□ 0.6
C9orf85-205ENST00000479413 RIC1Q4ADV7 1423 aa18.79■□□□□ 0.6
C9orf85-205ENST00000479413 ERBB4Q15303 1308 aa18.78■□□□□ 0.6
C9orf85-205ENST00000479413 GPTP24298 496 aa18.78■□□□□ 0.6
C9orf85-205ENST00000479413 EPHX2P34913 555 aa18.78■□□□□ 0.6
C9orf85-205ENST00000479413 GRIPAP1Q4V328 841 aa18.78■□□□□ 0.6
C9orf85-205ENST00000479413 TTLL7Q6ZT98 887 aa18.78■□□□□ 0.6
C9orf85-205ENST00000479413 PNMA8AQ86V59 439 aaPredicted RBP18.78■□□□□ 0.6
C9orf85-205ENST00000479413 CLEC11AQ9Y240 323 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms