RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 ARHGEF1Q92888 912 aaKnown RBP13.58□□□□□ -0.24
CDK11A-216ENST00000479362 ASAP1Q9ULH1 1129 aa13.58□□□□□ -0.24
CDK11A-216ENST00000479362 PASKQ96RG2 1323 aa13.58□□□□□ -0.24
CDK11A-216ENST00000479362 GNAT3A8MTJ3 354 aa13.57□□□□□ -0.24
CDK11A-216ENST00000479362 IFNL2Q8IZJ0 200 aa13.57□□□□□ -0.24
CDK11A-216ENST00000479362 RTF1Q92541 710 aaKnown RBP13.57□□□□□ -0.24
CDK11A-216ENST00000479362 TRIM35Q9UPQ4 493 aa13.57□□□□□ -0.24
CDK11A-216ENST00000479362 RTCBQ9Y3I0 505 aaKnown RBP13.57□□□□□ -0.24
CDK11A-216ENST00000479362 SIPA1L3O60292 1781 aaPredicted RBP13.57□□□□□ -0.24
CDK11A-216ENST00000479362 PHKG2P15735 406 aa13.56□□□□□ -0.24
CDK11A-216ENST00000479362 DDR1Q08345 913 aa13.56□□□□□ -0.24
CDK11A-216ENST00000479362 WWC1Q8IX03 1113 aa13.56□□□□□ -0.24
CDK11A-216ENST00000479362 RBM42Q9BTD8 480 aaKnown RBP13.56□□□□□ -0.24
CDK11A-216ENST00000479362 SSUH2Q9Y2M2 353 aa13.56□□□□□ -0.24
CDK11A-216ENST00000479362 ZNF521Q96K83 1311 aa13.56□□□□□ -0.24
CDK11A-216ENST00000479362 THSD7BQ9C0I4 1608 aa13.56□□□□□ -0.24
CDK11A-216ENST00000479362 HTATSF1O43719 755 aaKnown RBP13.55□□□□□ -0.24
CDK11A-216ENST00000479362 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
CDK11A-216ENST00000479362 MCM10Q7L590 875 aa13.55□□□□□ -0.24
CDK11A-216ENST00000479362 MRC1P22897 1456 aa13.55□□□□□ -0.24
CDK11A-216ENST00000479362 HSP90AB1P08238 724 aaKnown RBP13.54□□□□□ -0.24
CDK11A-216ENST00000479362 DCTN1Q14203 1278 aa13.54□□□□□ -0.24
CDK11A-216ENST00000479362 SLC4A9Q96Q91 983 aa13.54□□□□□ -0.24
CDK11A-216ENST00000479362 THUMPD2Q9BTF0 503 aaKnown RBP13.54□□□□□ -0.24
CDK11A-216ENST00000479362 AFDNP55196 1824 aaKnown RBP13.54□□□□□ -0.24
CDK11A-216ENST00000479362 NFKBIEO00221 500 aa13.53□□□□□ -0.24
CDK11A-216ENST00000479362 RFC4P35249 363 aa13.53□□□□□ -0.24
CDK11A-216ENST00000479362 CALD1Q05682 793 aaKnown RBP13.53□□□□□ -0.24
CDK11A-216ENST00000479362 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
CDK11A-216ENST00000479362 CEMIPQ8WUJ3 1361 aa13.53□□□□□ -0.24
CDK11A-216ENST00000479362 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
CDK11A-216ENST00000479362 GOLGA2Q08379 1002 aa13.52□□□□□ -0.25
CDK11A-216ENST00000479362 ATG3Q9NT62 314 aa13.52□□□□□ -0.25
CDK11A-216ENST00000479362 TMOD3Q9NYL9 352 aa13.52□□□□□ -0.25
CDK11A-216ENST00000479362 KDM3BQ7LBC6 1761 aa13.52□□□□□ -0.25
CDK11A-216ENST00000479362 FER1L6Q2WGJ9 1857 aa13.51□□□□□ -0.25
CDK11A-216ENST00000479362 NRXN2Q9P2S2 1712 aa13.51□□□□□ -0.25
CDK11A-216ENST00000479362 IL16Q14005 1332 aa13.51□□□□□ -0.25
CDK11A-216ENST00000479362 CNTNAP4Q9C0A0 1308 aa13.51□□□□□ -0.25
CDK11A-216ENST00000479362 TMEM88BA6NKF7 163 aa13.51□□□□□ -0.25
CDK11A-216ENST00000479362 RC3H1Q5TC82 1133 aaKnown RBP13.51□□□□□ -0.25
CDK11A-216ENST00000479362 IL17REQ8NFR9 667 aa13.51□□□□□ -0.25
CDK11A-216ENST00000479362 RASSF10A6NK89 507 aa13.5□□□□□ -0.25
CDK11A-216ENST00000479362 RPS6KA4O75676 772 aa13.5□□□□□ -0.25
CDK11A-216ENST00000479362 TEFQ10587 303 aa13.5□□□□□ -0.25
CDK11A-216ENST00000479362 DPY19L2Q6NUT2 758 aa13.5□□□□□ -0.25
CDK11A-216ENST00000479362 LGR6Q9HBX8 967 aa13.5□□□□□ -0.25
CDK11A-216ENST00000479362 SRP68Q9UHB9 627 aaKnown RBP13.5□□□□□ -0.25
CDK11A-216ENST00000479362 SCN4AP35499 1836 aa13.5□□□□□ -0.25
CDK11A-216ENST00000479362 ADAMTSL1Q8N6G6 1762 aa13.5□□□□□ -0.25
CDK11A-216ENST00000479362 LTBP1Q14766 1721 aa13.5□□□□□ -0.25
CDK11A-216ENST00000479362 POLRMTO00411 1230 aaKnown RBP13.49□□□□□ -0.25
CDK11A-216ENST00000479362 ITGBL1O95965 494 aaPredicted RBP13.49□□□□□ -0.25
CDK11A-216ENST00000479362 MAP2K1Q02750 393 aaPredicted RBP13.49□□□□□ -0.25
CDK11A-216ENST00000479362 USP42Q9H9J4 1324 aaKnown RBP13.48□□□□□ -0.25
CDK11A-216ENST00000479362 E9PSI1 815 aa13.48□□□□□ -0.25
CDK11A-216ENST00000479362 GNAI1P63096 354 aa13.48□□□□□ -0.25
CDK11A-216ENST00000479362 CDCA7LQ96GN5 454 aa13.48□□□□□ -0.25
CDK11A-216ENST00000479362 IFT57Q9NWB7 429 aa13.48□□□□□ -0.25
CDK11A-216ENST00000479362 LAS1LQ9Y4W2 734 aaKnown RBP13.48□□□□□ -0.25
CDK11A-216ENST00000479362 WDR33Q9C0J8 1336 aaKnown RBP13.47□□□□□ -0.25
CDK11A-216ENST00000479362 ERVV-2B6SEH9 535 aa13.47□□□□□ -0.25
CDK11A-216ENST00000479362 SLFN5Q08AF3 891 aa13.47□□□□□ -0.25
CDK11A-216ENST00000479362 LDHDQ86WU2 507 aa13.47□□□□□ -0.25
CDK11A-216ENST00000479362 CFAP44Q96MT7 982 aa13.47□□□□□ -0.25
CDK11A-216ENST00000479362 MYH16Q9H6N6 1097 aa13.47□□□□□ -0.25
CDK11A-216ENST00000479362 SLC52A2Q9HAB3 445 aa13.47□□□□□ -0.25
CDK11A-216ENST00000479362 FANCIQ9NVI1 1328 aa13.46□□□□□ -0.25
CDK11A-216ENST00000479362 UBR2Q8IWV8 1755 aa13.46□□□□□ -0.25
CDK11A-216ENST00000479362 CASP8AP2Q9UKL3 1982 aa13.46□□□□□ -0.25
CDK11A-216ENST00000479362 ZNF853P0CG23 659 aa13.46□□□□□ -0.25
CDK11A-216ENST00000479362 CABP4P57796 275 aa13.46□□□□□ -0.25
CDK11A-216ENST00000479362 TAF7Q15545 349 aaPredicted RBP13.46□□□□□ -0.25
CDK11A-216ENST00000479362 TJP1Q07157 1748 aa13.45□□□□□ -0.26
CDK11A-216ENST00000479362 DDNO94850 711 aaPredicted RBP13.45□□□□□ -0.26
CDK11A-216ENST00000479362 TM4SF1P30408 202 aa13.45□□□□□ -0.26
CDK11A-216ENST00000479362 DEFB115Q30KQ5 88 aa13.45□□□□□ -0.26
CDK11A-216ENST00000479362 ERFEQ4G0M1 354 aa13.45□□□□□ -0.26
CDK11A-216ENST00000479362 TTLL6Q8N841 843 aa13.45□□□□□ -0.26
CDK11A-216ENST00000479362 TSR2Q969E8 191 aaKnown RBP13.45□□□□□ -0.26
CDK11A-216ENST00000479362 MCOLN1Q9GZU1 580 aa13.45□□□□□ -0.26
CDK11A-216ENST00000479362 MBIPQ9NS73 344 aa13.45□□□□□ -0.26
CDK11A-216ENST00000479362 TSPYL4Q9UJ04 414 aa13.45□□□□□ -0.26
CDK11A-216ENST00000479362 BTBD11A6QL63 1104 aa13.44□□□□□ -0.26
CDK11A-216ENST00000479362 CHL1O00533 1208 aa13.44□□□□□ -0.26
CDK11A-216ENST00000479362 NFATC2IPQ8NCF5 419 aa13.44□□□□□ -0.26
CDK11A-216ENST00000479362 BABAM1Q9NWV8 329 aa13.44□□□□□ -0.26
CDK11A-216ENST00000479362 COL11A2P13942 1736 aaPredicted RBP13.43□□□□□ -0.26
CDK11A-216ENST00000479362 DUSP27Q5VZP5 1158 aa13.43□□□□□ -0.26
CDK11A-216ENST00000479362 TRMT2AQ8IZ69 625 aaKnown RBP13.43□□□□□ -0.26
CDK11A-216ENST00000479362 ANKRD31Q8N7Z5 1873 aa13.43□□□□□ -0.26
CDK11A-216ENST00000479362 TAF1DQ9H5J8 278 aaPredicted RBP13.43□□□□□ -0.26
CDK11A-216ENST00000479362 MIS18AQ9NYP9 233 aa13.43□□□□□ -0.26
CDK11A-216ENST00000479362 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
CDK11A-216ENST00000479362 CENPBP07199 599 aaPredicted RBP13.42□□□□□ -0.26
CDK11A-216ENST00000479362 PRPF38BQ5VTL8 546 aaKnown RBP13.42□□□□□ -0.26
CDK11A-216ENST00000479362 L3MBTL3Q96JM7 780 aaPredicted RBP13.42□□□□□ -0.26
CDK11A-216ENST00000479362 LAMB4A4D0S4 1761 aa13.42□□□□□ -0.26
CDK11A-216ENST00000479362 CARMIL3Q8ND23 1372 aa13.42□□□□□ -0.26
CDK11A-216ENST00000479362 IQCA1LA6NCM1 817 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms