RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 TAOK3Q9H2K8 898 aa14.83□□□□□ -0.04
HDLBP-237ENST00000479169 CEMIPQ8WUJ3 1361 aa14.83□□□□□ -0.04
HDLBP-237ENST00000479169 DDNO94850 711 aaPredicted RBP14.82□□□□□ -0.04
HDLBP-237ENST00000479169 DZIP3Q86Y13 1208 aaKnown RBP14.82□□□□□ -0.04
HDLBP-237ENST00000479169 PHACTR3Q96KR7 559 aa14.82□□□□□ -0.04
HDLBP-237ENST00000479169 LTBP3Q9NS15 1303 aa14.82□□□□□ -0.04
HDLBP-237ENST00000479169 PRAMEF22A3QJZ6 481 aa14.81□□□□□ -0.04
HDLBP-237ENST00000479169 SRGNP10124 158 aa14.81□□□□□ -0.04
HDLBP-237ENST00000479169 ST5P78524 1137 aa14.81□□□□□ -0.04
HDLBP-237ENST00000479169 STYK1Q6J9G0 422 aa14.81□□□□□ -0.04
HDLBP-237ENST00000479169 USP16Q9Y5T5 823 aa14.81□□□□□ -0.04
HDLBP-237ENST00000479169 BTBD11A6QL63 1104 aa14.8□□□□□ -0.04
HDLBP-237ENST00000479169 PRKAR2BP31323 418 aa14.8□□□□□ -0.04
HDLBP-237ENST00000479169 CHADLQ6NUI6 762 aa14.8□□□□□ -0.04
HDLBP-237ENST00000479169 NPM2Q86SE8 214 aaKnown RBP14.8□□□□□ -0.04
HDLBP-237ENST00000479169 CNKSR1Q969H4 720 aa14.8□□□□□ -0.04
HDLBP-237ENST00000479169 MKRN1Q9UHC7 482 aaKnown RBP14.8□□□□□ -0.04
HDLBP-237ENST00000479169 NPC1L1Q9UHC9 1359 aa14.8□□□□□ -0.04
HDLBP-237ENST00000479169 SCN4AP35499 1836 aa14.8□□□□□ -0.04
HDLBP-237ENST00000479169 MASTLQ96GX5 879 aa14.79□□□□□ -0.04
HDLBP-237ENST00000479169 RSPH6AQ9H0K4 717 aa14.79□□□□□ -0.04
HDLBP-237ENST00000479169 NBPF5PQ86XG9 351 aaPredicted RBP14.78□□□□□ -0.04
HDLBP-237ENST00000479169 CREBZFQ9NS37 354 aa14.78□□□□□ -0.04
HDLBP-237ENST00000479169 OLFM4Q6UX06 510 aa14.77□□□□□ -0.05
HDLBP-237ENST00000479169 C7orf43Q8WVR3 580 aa14.77□□□□□ -0.05
HDLBP-237ENST00000479169 CCDC93Q567U6 631 aa14.76□□□□□ -0.05
HDLBP-237ENST00000479169 SOGA3Q5TF21 947 aa14.76□□□□□ -0.05
HDLBP-237ENST00000479169 MCM10Q7L590 875 aa14.76□□□□□ -0.05
HDLBP-237ENST00000479169 LAMB4A4D0S4 1761 aa14.75□□□□□ -0.05
HDLBP-237ENST00000479169 ZNF541Q9H0D2 1346 aa14.75□□□□□ -0.05
HDLBP-237ENST00000479169 FAM177BA6PVY3 158 aa14.75□□□□□ -0.05
HDLBP-237ENST00000479169 NBPF26B4DH59 902 aa14.75□□□□□ -0.05
HDLBP-237ENST00000479169 DCTN1Q14203 1278 aa14.75□□□□□ -0.05
HDLBP-237ENST00000479169 NBPF10Q6P3W6 841 aaKnown RBP14.75□□□□□ -0.05
HDLBP-237ENST00000479169 CLEC4GQ6UXB4 293 aa14.75□□□□□ -0.05
HDLBP-237ENST00000479169 NBPF15Q8N660 670 aa14.75□□□□□ -0.05
HDLBP-237ENST00000479169 TAF1DQ9H5J8 278 aaPredicted RBP14.75□□□□□ -0.05
HDLBP-237ENST00000479169 ZNF277Q9NRM2 450 aaPredicted RBP14.75□□□□□ -0.05
HDLBP-237ENST00000479169 CNTNAP1P78357 1384 aa14.74□□□□□ -0.05
HDLBP-237ENST00000479169 DLG5Q8TDM6 1919 aa14.74□□□□□ -0.05
HDLBP-237ENST00000479169 PASKQ96RG2 1323 aa14.74□□□□□ -0.05
HDLBP-237ENST00000479169 NUP98P52948 1817 aa14.74□□□□□ -0.05
HDLBP-237ENST00000479169 SNRPA1P09661 255 aaKnown RBP14.74□□□□□ -0.05
HDLBP-237ENST00000479169 NPR1P16066 1061 aa14.74□□□□□ -0.05
HDLBP-237ENST00000479169 LDHDQ86WU2 507 aa14.74□□□□□ -0.05
HDLBP-237ENST00000479169 L3MBTL3Q96JM7 780 aaPredicted RBP14.74□□□□□ -0.05
HDLBP-237ENST00000479169 NIP7Q9Y221 180 aaKnown RBP eCLIP14.74□□□□□ -0.05
HDLBP-237ENST00000479169 ZNF652Q9Y2D9 606 aa14.74□□□□□ -0.05
HDLBP-237ENST00000479169 ADAMTSL1Q8N6G6 1762 aa14.73□□□□□ -0.05
HDLBP-237ENST00000479169 IQCA1LA6NCM1 817 aa14.73□□□□□ -0.05
HDLBP-237ENST00000479169 FKBP4Q02790 459 aaKnown RBP eCLIP14.73□□□□□ -0.05
HDLBP-237ENST00000479169 RTF1Q92541 710 aaKnown RBP14.73□□□□□ -0.05
HDLBP-237ENST00000479169 CFAP53Q96M91 514 aa14.73□□□□□ -0.05
HDLBP-237ENST00000479169 KLRG2A4D1S0 409 aaPredicted RBP14.72□□□□□ -0.05
HDLBP-237ENST00000479169 FOXN1O15353 648 aa14.72□□□□□ -0.05
HDLBP-237ENST00000479169 U2AF1L5P0DN76 240 aaPredicted RBP14.72□□□□□ -0.05
HDLBP-237ENST00000479169 U2AF1Q01081 240 aaKnown RBP eCLIP14.72□□□□□ -0.05
HDLBP-237ENST00000479169 HLFQ16534 295 aa14.72□□□□□ -0.05
HDLBP-237ENST00000479169 EAPPQ56P03 285 aaPredicted RBP14.72□□□□□ -0.05
HDLBP-237ENST00000479169 TPTE2Q6XPS3 522 aa14.71□□□□□ -0.05
HDLBP-237ENST00000479169 NUDCQ9Y266 331 aa14.71□□□□□ -0.05
HDLBP-237ENST00000479169 KDM3BQ7LBC6 1761 aa14.7□□□□□ -0.06
HDLBP-237ENST00000479169 ITGBL1O95965 494 aaPredicted RBP14.7□□□□□ -0.06
HDLBP-237ENST00000479169 VEGFBP49765 207 aa14.7□□□□□ -0.06
HDLBP-237ENST00000479169 MIS18AQ9NYP9 233 aa14.7□□□□□ -0.06
HDLBP-237ENST00000479169 HACL1Q9UJ83 578 aa14.7□□□□□ -0.06
HDLBP-237ENST00000479169 ABCC12Q96J65 1359 aa14.7□□□□□ -0.06
HDLBP-237ENST00000479169 RNF123Q5XPI4 1314 aa14.69□□□□□ -0.06
HDLBP-237ENST00000479169 SNED1Q8TER0 1413 aa14.69□□□□□ -0.06
HDLBP-237ENST00000479169 COL4A5P29400 1685 aa14.69□□□□□ -0.06
HDLBP-237ENST00000479169 TMEM88BA6NKF7 163 aa14.69□□□□□ -0.06
HDLBP-237ENST00000479169 PPP2R1AP30153 589 aa14.69□□□□□ -0.06
HDLBP-237ENST00000479169 EPHX2P34913 555 aa14.69□□□□□ -0.06
HDLBP-237ENST00000479169 RTKN2Q8IZC4 609 aa14.69□□□□□ -0.06
HDLBP-237ENST00000479169 SYNE4Q8N205 404 aa14.69□□□□□ -0.06
HDLBP-237ENST00000479169 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
HDLBP-237ENST00000479169 LTBP1Q14766 1721 aa14.69□□□□□ -0.06
HDLBP-237ENST00000479169 IARSP41252 1262 aaKnown RBP14.68□□□□□ -0.06
HDLBP-237ENST00000479169 NUTM1Q86Y26 1132 aa14.68□□□□□ -0.06
HDLBP-237ENST00000479169 NGEFQ8N5V2 710 aa14.68□□□□□ -0.06
HDLBP-237ENST00000479169 FZD9O00144 591 aa14.67□□□□□ -0.06
HDLBP-237ENST00000479169 RGL2O15211 777 aa14.67□□□□□ -0.06
HDLBP-237ENST00000479169 GTF2E1P29083 439 aaPredicted RBP14.67□□□□□ -0.06
HDLBP-237ENST00000479169 TAF7Q15545 349 aaPredicted RBP14.67□□□□□ -0.06
HDLBP-237ENST00000479169 MAP1SQ66K74 1059 aaPredicted RBP14.67□□□□□ -0.06
HDLBP-237ENST00000479169 SLC51AQ86UW1 340 aa14.67□□□□□ -0.06
HDLBP-237ENST00000479169 HTATSF1O43719 755 aaKnown RBP14.66□□□□□ -0.06
HDLBP-237ENST00000479169 ALDH1B1P30837 517 aa14.66□□□□□ -0.06
HDLBP-237ENST00000479169 AIDAQ96BJ3 306 aa14.66□□□□□ -0.06
HDLBP-237ENST00000479169 TRPM7Q96QT4 1865 aa14.65□□□□□ -0.06
HDLBP-237ENST00000479169 CTCFP49711 727 aaPredicted RBP14.65□□□□□ -0.06
HDLBP-237ENST00000479169 CRY2Q49AN0 593 aa14.65□□□□□ -0.06
HDLBP-237ENST00000479169 TTLL7Q6ZT98 887 aa14.65□□□□□ -0.06
HDLBP-237ENST00000479169 CNTROBQ8N137 903 aa14.65□□□□□ -0.06
HDLBP-237ENST00000479169 PRDM10Q9NQV6 1147 aa14.65□□□□□ -0.06
HDLBP-237ENST00000479169 GPTP24298 496 aa14.64□□□□□ -0.07
HDLBP-237ENST00000479169 GPC2Q8N158 579 aa14.64□□□□□ -0.07
HDLBP-237ENST00000479169 PSMD1Q99460 953 aa14.64□□□□□ -0.07
HDLBP-237ENST00000479169 NYXQ9GZU5 481 aa14.64□□□□□ -0.07
HDLBP-237ENST00000479169 WBP1LQ9NX94 342 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms