RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 ANKRD36CQ5JPF3 1778 aa17.35■□□□□ 0.37
SMARCAL1-211ENST00000479008 AFDNP55196 1824 aaKnown RBP17.35■□□□□ 0.37
SMARCAL1-211ENST00000479008 A0A087WZG4 1122 aa17.35■□□□□ 0.37
SMARCAL1-211ENST00000479008 PI4KAP2A4QPH2 592 aa17.35■□□□□ 0.37
SMARCAL1-211ENST00000479008 RIC3Q7Z5B4 369 aa17.35■□□□□ 0.37
SMARCAL1-211ENST00000479008 DZIP3Q86Y13 1208 aaKnown RBP17.35■□□□□ 0.37
SMARCAL1-211ENST00000479008 PI4KAP1Q8N8J0 262 aa17.35■□□□□ 0.37
SMARCAL1-211ENST00000479008 CLUAP1Q96AJ1 413 aa17.35■□□□□ 0.37
SMARCAL1-211ENST00000479008 ANO8Q9HCE9 1232 aaPredicted RBP17.35■□□□□ 0.37
SMARCAL1-211ENST00000479008 STK32BQ9NY57 414 aa17.35■□□□□ 0.37
SMARCAL1-211ENST00000479008 TBC1D2BQ9UPU7 963 aa17.35■□□□□ 0.37
SMARCAL1-211ENST00000479008 ADCY9O60503 1353 aa17.35■□□□□ 0.37
SMARCAL1-211ENST00000479008 F6X3S4 739 aa17.34■□□□□ 0.37
SMARCAL1-211ENST00000479008 KSR2Q6VAB6 950 aa17.34■□□□□ 0.37
SMARCAL1-211ENST00000479008 ANKRD13DQ6ZTN6 518 aa17.34■□□□□ 0.37
SMARCAL1-211ENST00000479008 ZBTB3Q9H5J0 574 aa17.34■□□□□ 0.37
SMARCAL1-211ENST00000479008 TFCP2L1Q9NZI6 479 aa17.34■□□□□ 0.37
SMARCAL1-211ENST00000479008 MAP3K2Q9Y2U5 619 aa17.34■□□□□ 0.37
SMARCAL1-211ENST00000479008 MAP3K15Q6ZN16 1313 aa17.33■□□□□ 0.36
SMARCAL1-211ENST00000479008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.33■□□□□ 0.36
SMARCAL1-211ENST00000479008 SSFA2P28290 1259 aa17.33■□□□□ 0.36
SMARCAL1-211ENST00000479008 TRAPPC3LQ5T215 181 aa17.33■□□□□ 0.36
SMARCAL1-211ENST00000479008 FTSJ3Q8IY81 847 aaKnown RBP17.33■□□□□ 0.36
SMARCAL1-211ENST00000479008 PLBD2Q8NHP8 589 aa17.33■□□□□ 0.36
SMARCAL1-211ENST00000479008 ARHGEF1Q92888 912 aaKnown RBP17.33■□□□□ 0.36
SMARCAL1-211ENST00000479008 PXDNLA1KZ92 1463 aa17.32■□□□□ 0.36
SMARCAL1-211ENST00000479008 ABCC4O15439 1325 aa17.32■□□□□ 0.36
SMARCAL1-211ENST00000479008 MS4A1P11836 297 aa17.32■□□□□ 0.36
SMARCAL1-211ENST00000479008 ADRA2BP18089 450 aa17.32■□□□□ 0.36
SMARCAL1-211ENST00000479008 SLC15A2Q16348 729 aa17.32■□□□□ 0.36
SMARCAL1-211ENST00000479008 C20orf194Q5TEA3 1177 aa17.32■□□□□ 0.36
SMARCAL1-211ENST00000479008 SLC4A10Q6U841 1118 aa17.32■□□□□ 0.36
SMARCAL1-211ENST00000479008 DZIP1LQ8IYY4 767 aaKnown RBP17.32■□□□□ 0.36
SMARCAL1-211ENST00000479008 DNAAF4Q8WXU2 420 aa17.32■□□□□ 0.36
SMARCAL1-211ENST00000479008 CAMTA2O94983 1202 aa17.31■□□□□ 0.36
SMARCAL1-211ENST00000479008 RFC4P35249 363 aa17.31■□□□□ 0.36
SMARCAL1-211ENST00000479008 PANK1Q8TE04 598 aa17.31■□□□□ 0.36
SMARCAL1-211ENST00000479008 ERVV-1B6SEH8 477 aa17.3■□□□□ 0.36
SMARCAL1-211ENST00000479008 RLBP1P12271 317 aa17.3■□□□□ 0.36
SMARCAL1-211ENST00000479008 PDE3AQ14432 1141 aa17.3■□□□□ 0.36
SMARCAL1-211ENST00000479008 MYD88Q99836 296 aa17.3■□□□□ 0.36
SMARCAL1-211ENST00000479008 SRP68Q9UHB9 627 aaKnown RBP17.3■□□□□ 0.36
SMARCAL1-211ENST00000479008 NARFQ9UHQ1 456 aa17.3■□□□□ 0.36
SMARCAL1-211ENST00000479008 PNPLA7Q6ZV29 1317 aa17.29■□□□□ 0.36
SMARCAL1-211ENST00000479008 ZPR1O75312 459 aa17.29■□□□□ 0.36
SMARCAL1-211ENST00000479008 IRX6P78412 446 aaPredicted RBP17.29■□□□□ 0.36
SMARCAL1-211ENST00000479008 HLFQ16534 295 aa17.29■□□□□ 0.36
SMARCAL1-211ENST00000479008 USPL1Q5W0Q7 1092 aa17.29■□□□□ 0.36
SMARCAL1-211ENST00000479008 TMEM57Q8N5G2 664 aa17.29■□□□□ 0.36
SMARCAL1-211ENST00000479008 FLAD1Q8NFF5 587 aa17.29■□□□□ 0.36
SMARCAL1-211ENST00000479008 METTL22Q9BUU2 404 aaPredicted RBP17.29■□□□□ 0.36
SMARCAL1-211ENST00000479008 USP42Q9H9J4 1324 aaKnown RBP17.28■□□□□ 0.36
SMARCAL1-211ENST00000479008 MSH5O43196 834 aa17.28■□□□□ 0.36
SMARCAL1-211ENST00000479008 GIGYF2Q6Y7W6 1299 aaKnown RBP17.28■□□□□ 0.36
SMARCAL1-211ENST00000479008 COL23A1Q86Y22 540 aaPredicted RBP17.28■□□□□ 0.36
SMARCAL1-211ENST00000479008 ATP10DQ9P241 1426 aa17.28■□□□□ 0.36
SMARCAL1-211ENST00000479008 CCT4P50991 539 aaKnown RBP17.27■□□□□ 0.36
SMARCAL1-211ENST00000479008 NEXNQ0ZGT2 675 aa17.27■□□□□ 0.36
SMARCAL1-211ENST00000479008 ZNF652Q9Y2D9 606 aa17.27■□□□□ 0.36
SMARCAL1-211ENST00000479008 COG6Q9Y2V7 657 aa17.27■□□□□ 0.36
SMARCAL1-211ENST00000479008 ATP5J2-PTCD1G3V325 749 aa17.26■□□□□ 0.35
SMARCAL1-211ENST00000479008 TCIRG1Q13488 830 aa17.26■□□□□ 0.35
SMARCAL1-211ENST00000479008 HSP90AB3PQ58FF7 597 aa17.26■□□□□ 0.35
SMARCAL1-211ENST00000479008 BEND3Q5T5X7 828 aa17.26■□□□□ 0.35
SMARCAL1-211ENST00000479008 INTS3Q68E01 1043 aaKnown RBP17.26■□□□□ 0.35
SMARCAL1-211ENST00000479008 ITPRIPQ8IWB1 547 aa17.26■□□□□ 0.35
SMARCAL1-211ENST00000479008 SRCIN1Q9C0H9 1055 aa17.26■□□□□ 0.35
SMARCAL1-211ENST00000479008 BCL2L12Q9HB09 334 aa17.26■□□□□ 0.35
SMARCAL1-211ENST00000479008 NEFLP07196 543 aa17.25■□□□□ 0.35
SMARCAL1-211ENST00000479008 CWF19L2Q2TBE0 894 aaKnown RBP17.25■□□□□ 0.35
SMARCAL1-211ENST00000479008 LINS1Q8NG48 757 aa17.25■□□□□ 0.35
SMARCAL1-211ENST00000479008 CRBNQ96SW2 442 aa17.25■□□□□ 0.35
SMARCAL1-211ENST00000479008 RGL2O15211 777 aa17.24■□□□□ 0.35
SMARCAL1-211ENST00000479008 IGKV5-2P06315 115 aa17.24■□□□□ 0.35
SMARCAL1-211ENST00000479008 GPTP24298 496 aa17.24■□□□□ 0.35
SMARCAL1-211ENST00000479008 MVPQ14764 893 aaKnown RBP17.24■□□□□ 0.35
SMARCAL1-211ENST00000479008 CLEC4GQ6UXB4 293 aa17.24■□□□□ 0.35
SMARCAL1-211ENST00000479008 ISCA1Q9BUE6 129 aa17.24■□□□□ 0.35
SMARCAL1-211ENST00000479008 COL24A1Q17RW2 1714 aa17.24■□□□□ 0.35
SMARCAL1-211ENST00000479008 CASZ1Q86V15 1759 aa17.23■□□□□ 0.35
SMARCAL1-211ENST00000479008 NEURL1BA8MQ27 555 aa17.23■□□□□ 0.35
SMARCAL1-211ENST00000479008 ALDH1L1O75891 902 aa17.23■□□□□ 0.35
SMARCAL1-211ENST00000479008 GYS1P13807 737 aa17.23■□□□□ 0.35
SMARCAL1-211ENST00000479008 FKBP8Q14318 412 aa17.22■□□□□ 0.35
SMARCAL1-211ENST00000479008 TBC1D9BQ66K14 1250 aa17.22■□□□□ 0.35
SMARCAL1-211ENST00000479008 BICDL1Q6ZP65 573 aa17.22■□□□□ 0.35
SMARCAL1-211ENST00000479008 ZNF34Q8IZ26 560 aa17.22■□□□□ 0.35
SMARCAL1-211ENST00000479008 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.35
SMARCAL1-211ENST00000479008 UBN2Q6ZU65 1347 aa17.21■□□□□ 0.35
SMARCAL1-211ENST00000479008 CWC25Q9NXE8 425 aaPredicted RBP17.21■□□□□ 0.35
SMARCAL1-211ENST00000479008 DDX19BQ9UMR2 479 aa17.21■□□□□ 0.35
SMARCAL1-211ENST00000479008 TRIM28Q13263 835 aaKnown RBP17.2■□□□□ 0.34
SMARCAL1-211ENST00000479008 GCKRQ14397 625 aa17.2■□□□□ 0.34
SMARCAL1-211ENST00000479008 R3HDM1Q15032 1099 aaKnown RBP17.2■□□□□ 0.34
SMARCAL1-211ENST00000479008 NLRP10Q86W26 655 aa17.2■□□□□ 0.34
SMARCAL1-211ENST00000479008 CCDC191Q8NCU4 936 aa17.2■□□□□ 0.34
SMARCAL1-211ENST00000479008 EXOC6Q8TAG9 804 aa17.2■□□□□ 0.34
SMARCAL1-211ENST00000479008 PDGFDQ9GZP0 370 aaPredicted RBP17.2■□□□□ 0.34
SMARCAL1-211ENST00000479008 NFIXQ14938 502 aa17.19■□□□□ 0.34
SMARCAL1-211ENST00000479008 SETDB2Q96T68 719 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms