RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 ZNF830Q96NB3 372 aaPredicted RBP16.99■□□□□ 0.31
CCDC78-210ENST00000478979 CPA1P15085 419 aa16.98■□□□□ 0.31
CCDC78-210ENST00000478979 FAM208AQ9UK61 1670 aaKnown RBP16.98■□□□□ 0.31
CCDC78-210ENST00000478979 ANKARQ7Z5J8 1434 aa16.98■□□□□ 0.31
CCDC78-210ENST00000478979 MYL6BP14649 208 aa16.98■□□□□ 0.31
CCDC78-210ENST00000478979 MCCP23508 829 aa16.98■□□□□ 0.31
CCDC78-210ENST00000478979 HMGN5P82970 282 aaKnown RBP16.98■□□□□ 0.31
CCDC78-210ENST00000478979 PLEKHO1Q53GL0 409 aaPredicted RBP16.98■□□□□ 0.31
CCDC78-210ENST00000478979 SIL1Q9H173 461 aa16.98■□□□□ 0.31
CCDC78-210ENST00000478979 TSPY26PQ9H489 355 aa16.98■□□□□ 0.31
CCDC78-210ENST00000478979 GDPD2Q9HCC8 539 aa16.98■□□□□ 0.31
CCDC78-210ENST00000478979 KIF20AO95235 890 aa16.97■□□□□ 0.31
CCDC78-210ENST00000478979 MBD3O95983 291 aa16.97■□□□□ 0.31
CCDC78-210ENST00000478979 GTF2F1P35269 517 aaKnown RBP eCLIP16.97■□□□□ 0.31
CCDC78-210ENST00000478979 BEND3Q5T5X7 828 aa16.97■□□□□ 0.31
CCDC78-210ENST00000478979 SSH3Q8TE77 659 aa16.97■□□□□ 0.31
CCDC78-210ENST00000478979 PIBF1Q8WXW3 757 aa16.97■□□□□ 0.31
CCDC78-210ENST00000478979 XRN1Q8IZH2 1706 aaKnown RBP16.97■□□□□ 0.31
CCDC78-210ENST00000478979 CABLES1Q8TDN4 633 aa16.97■□□□□ 0.31
CCDC78-210ENST00000478979 MARF1Q9Y4F3 1742 aaKnown RBP16.96■□□□□ 0.31
CCDC78-210ENST00000478979 NOLC1Q14978 699 aaKnown RBP eCLIP16.96■□□□□ 0.31
CCDC78-210ENST00000478979 C17orf53Q8N3J3 647 aaPredicted RBP16.96■□□□□ 0.31
CCDC78-210ENST00000478979 NLRP2Q9NX02 1062 aa16.96■□□□□ 0.31
CCDC78-210ENST00000478979 RNMTO43148 476 aaKnown RBP16.95■□□□□ 0.3
CCDC78-210ENST00000478979 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
CCDC78-210ENST00000478979 KCNH5Q8NCM2 988 aa16.95■□□□□ 0.3
CCDC78-210ENST00000478979 KLHDC4Q8TBB5 520 aa16.95■□□□□ 0.3
CCDC78-210ENST00000478979 PXDNQ92626 1479 aa16.95■□□□□ 0.3
CCDC78-210ENST00000478979 KIF3AQ9Y496 699 aa16.95■□□□□ 0.3
CCDC78-210ENST00000478979 LETM1O95202 739 aaPredicted RBP16.95■□□□□ 0.3
CCDC78-210ENST00000478979 PROSER2Q86WR7 435 aaPredicted RBP16.95■□□□□ 0.3
CCDC78-210ENST00000478979 CCDC9Q9Y3X0 531 aaKnown RBP16.95■□□□□ 0.3
CCDC78-210ENST00000478979 SPDYE4A6NLX3 237 aa16.94■□□□□ 0.3
CCDC78-210ENST00000478979 KIF1BPQ96EK5 621 aa16.93■□□□□ 0.3
CCDC78-210ENST00000478979 TTC12Q9H892 705 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-210ENST00000478979 BCL2L12Q9HB09 334 aa16.93■□□□□ 0.3
CCDC78-210ENST00000478979 ADCY9O60503 1353 aa16.93■□□□□ 0.3
CCDC78-210ENST00000478979 CEMIPQ8WUJ3 1361 aa16.93■□□□□ 0.3
CCDC78-210ENST00000478979 KRT28Q7Z3Y7 464 aa16.93■□□□□ 0.3
CCDC78-210ENST00000478979 PI4K2BQ8TCG2 481 aa16.93■□□□□ 0.3
CCDC78-210ENST00000478979 BBXQ8WY36 941 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-210ENST00000478979 CSB-PGBD3P0DP91 1061 aa16.93■□□□□ 0.3
CCDC78-210ENST00000478979 CHRNA2Q15822 529 aa16.93■□□□□ 0.3
CCDC78-210ENST00000478979 DBF4Q9UBU7 674 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-210ENST00000478979 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-210ENST00000478979 ARHGEF25Q86VW2 580 aa16.92■□□□□ 0.3
CCDC78-210ENST00000478979 CCDC8Q9H0W5 538 aaPredicted RBP16.92■□□□□ 0.3
CCDC78-210ENST00000478979 STAP2Q9UGK3 403 aa16.92■□□□□ 0.3
CCDC78-210ENST00000478979 LRRC37A3O60309 1634 aa16.91■□□□□ 0.3
CCDC78-210ENST00000478979 GIGYF1O75420 1035 aaPredicted RBP16.91■□□□□ 0.3
CCDC78-210ENST00000478979 USP25Q9UHP3 1055 aa16.91■□□□□ 0.3
CCDC78-210ENST00000478979 RASEFQ8IZ41 740 aa16.91■□□□□ 0.3
CCDC78-210ENST00000478979 POLA2Q14181 598 aa16.9■□□□□ 0.3
CCDC78-210ENST00000478979 AACSQ86V21 672 aa16.9■□□□□ 0.3
CCDC78-210ENST00000478979 PDCL2Q8N4E4 241 aa16.9■□□□□ 0.3
CCDC78-210ENST00000478979 CNTROBQ8N137 903 aa16.9■□□□□ 0.3
CCDC78-210ENST00000478979 IFIT2P09913 472 aaKnown RBP16.9■□□□□ 0.3
CCDC78-210ENST00000478979 CLASRPQ8N2M8 674 aaKnown RBP16.9■□□□□ 0.3
CCDC78-210ENST00000478979 SYAP1Q96A49 352 aaPredicted RBP16.9■□□□□ 0.3
CCDC78-210ENST00000478979 DIAPH3Q9NSV4 1193 aa16.9■□□□□ 0.3
CCDC78-210ENST00000478979 IGSF3O75054 1194 aa16.89■□□□□ 0.29
CCDC78-210ENST00000478979 GTF2E1P29083 439 aaPredicted RBP16.89■□□□□ 0.29
CCDC78-210ENST00000478979 RIC3Q7Z5B4 369 aa16.89■□□□□ 0.29
CCDC78-210ENST00000478979 NFATC2IPQ8NCF5 419 aa16.89■□□□□ 0.29
CCDC78-210ENST00000478979 RAB11FIP3O75154 756 aa16.89■□□□□ 0.29
CCDC78-210ENST00000478979 SUCLG2Q96I99 432 aa16.88■□□□□ 0.29
CCDC78-210ENST00000478979 BICC1Q9H694 974 aaKnown RBP16.88■□□□□ 0.29
CCDC78-210ENST00000478979 SPTLC3Q9NUV7 552 aa16.88■□□□□ 0.29
CCDC78-210ENST00000478979 BABAM1Q9NWV8 329 aa16.88■□□□□ 0.29
CCDC78-210ENST00000478979 NDUFB9Q9Y6M9 179 aa16.88■□□□□ 0.29
CCDC78-210ENST00000478979 NFAT5O94916 1531 aa16.88■□□□□ 0.29
CCDC78-210ENST00000478979 BRD1O95696 1058 aa16.88■□□□□ 0.29
CCDC78-210ENST00000478979 U2AF2P26368 475 aaKnown RBP eCLIP16.88■□□□□ 0.29
CCDC78-210ENST00000478979 AMOTQ4VCS5 1084 aa16.88■□□□□ 0.29
CCDC78-210ENST00000478979 RAPGEF4Q8WZA2 1011 aa16.88■□□□□ 0.29
CCDC78-210ENST00000478979 TLR7Q9NYK1 1049 aaKnown RBP16.88■□□□□ 0.29
CCDC78-210ENST00000478979 ADCY5O95622 1261 aa16.87■□□□□ 0.29
CCDC78-210ENST00000478979 KCNJ4P48050 445 aa16.87■□□□□ 0.29
CCDC78-210ENST00000478979 KSR2Q6VAB6 950 aa16.87■□□□□ 0.29
CCDC78-210ENST00000478979 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
CCDC78-210ENST00000478979 SGSM2O43147 1006 aa16.87■□□□□ 0.29
CCDC78-210ENST00000478979 CASTP20810 708 aaKnown RBP16.87■□□□□ 0.29
CCDC78-210ENST00000478979 PTH1RQ03431 593 aa16.87■□□□□ 0.29
CCDC78-210ENST00000478979 PRPF40BQ6NWY9 871 aaKnown RBP16.87■□□□□ 0.29
CCDC78-210ENST00000478979 TCEANC2Q96MN5 208 aa16.87■□□□□ 0.29
CCDC78-210ENST00000478979 SNX14Q9Y5W7 946 aa16.87■□□□□ 0.29
CCDC78-210ENST00000478979 CACNA1FO60840 1977 aa16.87■□□□□ 0.29
CCDC78-210ENST00000478979 GADD45BO75293 160 aaPredicted RBP16.86■□□□□ 0.29
CCDC78-210ENST00000478979 BOLA2Q9H3K6 86 aa16.86■□□□□ 0.29
CCDC78-210ENST00000478979 PHF14O94880 888 aa16.86■□□□□ 0.29
CCDC78-210ENST00000478979 EDC3Q96F86 508 aaKnown RBP16.86■□□□□ 0.29
CCDC78-210ENST00000478979 HSPA4P34932 840 aa16.85■□□□□ 0.29
CCDC78-210ENST00000478979 FAM184AQ8NB25 1140 aa16.85■□□□□ 0.29
CCDC78-210ENST00000478979 MYD88Q99836 296 aa16.85■□□□□ 0.29
CCDC78-210ENST00000478979 AK2P54819 239 aa16.85■□□□□ 0.29
CCDC78-210ENST00000478979 UVSSAQ2YD98 709 aa16.85■□□□□ 0.29
CCDC78-210ENST00000478979 CHD2O14647 1828 aaKnown RBP16.85■□□□□ 0.29
CCDC78-210ENST00000478979 ATP5J2-PTCD1G3V325 749 aa16.85■□□□□ 0.29
CCDC78-210ENST00000478979 PTCD1O75127 700 aaKnown RBP16.85■□□□□ 0.29
CCDC78-210ENST00000478979 ADCK5Q3MIX3 580 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms