RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 PRRT3Q5FWE3 981 aa7.5□□□□□ -1.21
VLDLR-204ENST00000478776 TNS4Q8IZW8 715 aa7.5□□□□□ -1.21
VLDLR-204ENST00000478776 DEPDC4Q8N2C3 294 aa7.5□□□□□ -1.21
VLDLR-204ENST00000478776 HCN2Q9UL51 889 aa7.5□□□□□ -1.21
VLDLR-204ENST00000478776 ATP1A2P50993 1020 aa7.49□□□□□ -1.21
VLDLR-204ENST00000478776 TBCELQ5QJ74 424 aa7.49□□□□□ -1.21
VLDLR-204ENST00000478776 RHPN1Q8TCX5 695 aa7.49□□□□□ -1.21
VLDLR-204ENST00000478776 ZDHHC1Q8WTX9 485 aa7.49□□□□□ -1.21
VLDLR-204ENST00000478776 TRIM11Q96F44 468 aa7.49□□□□□ -1.21
VLDLR-204ENST00000478776 GPC6Q9Y625 555 aaPredicted RBP7.49□□□□□ -1.21
VLDLR-204ENST00000478776 EML1O00423 815 aa7.48□□□□□ -1.21
VLDLR-204ENST00000478776 SIN3BO75182 1162 aa7.48□□□□□ -1.21
VLDLR-204ENST00000478776 APBA3O96018 575 aa7.48□□□□□ -1.21
VLDLR-204ENST00000478776 DOC2BQ14184 412 aa7.48□□□□□ -1.21
VLDLR-204ENST00000478776 TPCN2Q8NHX9 752 aa7.48□□□□□ -1.21
VLDLR-204ENST00000478776 SEMA6BQ9H3T3 888 aa7.48□□□□□ -1.21
VLDLR-204ENST00000478776 ANKIB1Q9P2G1 1089 aa7.48□□□□□ -1.21
VLDLR-204ENST00000478776 RBM19Q9Y4C8 960 aaKnown RBP7.48□□□□□ -1.21
VLDLR-204ENST00000478776 Q8N3U1 123 aa7.47□□□□□ -1.21
VLDLR-204ENST00000478776 PSMA6P60900 246 aaKnown RBP7.46□□□□□ -1.22
VLDLR-204ENST00000478776 SFSWAPQ12872 951 aaKnown RBP7.46□□□□□ -1.22
VLDLR-204ENST00000478776 CCDC102BQ68D86 513 aa7.46□□□□□ -1.22
VLDLR-204ENST00000478776 CEP63Q96MT8 703 aa7.46□□□□□ -1.22
VLDLR-204ENST00000478776 M0R082 166 aa7.45□□□□□ -1.22
VLDLR-204ENST00000478776 EPHA4P54764 986 aa7.45□□□□□ -1.22
VLDLR-204ENST00000478776 TRIM28Q13263 835 aaKnown RBP7.45□□□□□ -1.22
VLDLR-204ENST00000478776 ZNF417Q8TAU3 575 aa7.45□□□□□ -1.22
VLDLR-204ENST00000478776 ZNF587Q96SQ5 575 aaPredicted RBP7.45□□□□□ -1.22
VLDLR-204ENST00000478776 HCN4Q9Y3Q4 1203 aa7.45□□□□□ -1.22
VLDLR-204ENST00000478776 SFI1A8K8P3 1242 aa7.44□□□□□ -1.22
VLDLR-204ENST00000478776 ADARB2-AS1A8MUL3 147 aa7.44□□□□□ -1.22
VLDLR-204ENST00000478776 SPEM2Q0P670 501 aa7.44□□□□□ -1.22
VLDLR-204ENST00000478776 C1orf53Q5VUE5 145 aa7.44□□□□□ -1.22
VLDLR-204ENST00000478776 POM121Q96HA1 1249 aa7.44□□□□□ -1.22
VLDLR-204ENST00000478776 SLC30A3Q99726 388 aa7.44□□□□□ -1.22
VLDLR-204ENST00000478776 BRD7Q9NPI1 651 aa7.44□□□□□ -1.22
VLDLR-204ENST00000478776 USP17L3A6NCW0 530 aa7.43□□□□□ -1.22
VLDLR-204ENST00000478776 USP17L4A6NCW7 530 aa7.43□□□□□ -1.22
VLDLR-204ENST00000478776 UBTFP17480 764 aaKnown RBP7.43□□□□□ -1.22
VLDLR-204ENST00000478776 USP17L2Q6R6M4 530 aa7.43□□□□□ -1.22
VLDLR-204ENST00000478776 USP17L1Q7RTZ2 530 aa7.43□□□□□ -1.22
VLDLR-204ENST00000478776 TNFRSF25Q93038 417 aa7.43□□□□□ -1.22
VLDLR-204ENST00000478776 NACC1Q96RE7 527 aa7.43□□□□□ -1.22
VLDLR-204ENST00000478776 TSPAN10Q9H1Z9 355 aaPredicted RBP7.43□□□□□ -1.22
VLDLR-204ENST00000478776 PALM3A6NDB9 673 aaPredicted RBP7.42□□□□□ -1.22
VLDLR-204ENST00000478776 ADH7P40394 386 aa7.42□□□□□ -1.22
VLDLR-204ENST00000478776 FLIIQ13045 1269 aa7.42□□□□□ -1.22
VLDLR-204ENST00000478776 SH3PXD2AQ5TCZ1 1133 aa7.42□□□□□ -1.22
VLDLR-204ENST00000478776 HDGFL1Q5TGJ6 251 aa7.42□□□□□ -1.22
VLDLR-204ENST00000478776 PLEKHM2Q8IWE5 1019 aa7.42□□□□□ -1.22
VLDLR-204ENST00000478776 PHACTR1Q9C0D0 580 aa7.42□□□□□ -1.22
VLDLR-204ENST00000478776 KCNH4Q9UQ05 1017 aa7.42□□□□□ -1.22
VLDLR-204ENST00000478776 ZBTB7BO15156 539 aaPredicted RBP7.41□□□□□ -1.22
VLDLR-204ENST00000478776 PPP1R12BO60237 982 aaPredicted RBP7.41□□□□□ -1.22
VLDLR-204ENST00000478776 TBC1D8BQ0IIM8 1120 aa7.41□□□□□ -1.22
VLDLR-204ENST00000478776 RAB44Q7Z6P3 723 aaPredicted RBP7.41□□□□□ -1.22
VLDLR-204ENST00000478776 MICALL1Q8N3F8 863 aa7.41□□□□□ -1.22
VLDLR-204ENST00000478776 LARGE2Q8N3Y3 721 aa7.41□□□□□ -1.22
VLDLR-204ENST00000478776 OGFOD1Q8N543 542 aa7.41□□□□□ -1.22
VLDLR-204ENST00000478776 C7orf43Q8WVR3 580 aa7.41□□□□□ -1.22
VLDLR-204ENST00000478776 HSH2DQ96JZ2 352 aa7.41□□□□□ -1.22
VLDLR-204ENST00000478776 MKRN1Q9UHC7 482 aaKnown RBP7.41□□□□□ -1.22
VLDLR-204ENST00000478776 M0R2N6 131 aa7.4□□□□□ -1.22
VLDLR-204ENST00000478776 ATP9BO43861 1147 aa7.4□□□□□ -1.22
VLDLR-204ENST00000478776 HIRAP54198 1017 aaPredicted RBP7.4□□□□□ -1.22
VLDLR-204ENST00000478776 CLDN10P78369 228 aa7.4□□□□□ -1.22
VLDLR-204ENST00000478776 HIF1AQ16665 826 aa7.4□□□□□ -1.22
VLDLR-204ENST00000478776 ZMYM1Q5SVZ6 1142 aa7.4□□□□□ -1.22
VLDLR-204ENST00000478776 TRAPPC3LQ5T215 181 aa7.4□□□□□ -1.22
VLDLR-204ENST00000478776 BHMTQ93088 406 aa7.4□□□□□ -1.22
VLDLR-204ENST00000478776 IGFLR1Q9H665 355 aa7.4□□□□□ -1.22
VLDLR-204ENST00000478776 PRDM6Q9NQX0 595 aa7.4□□□□□ -1.22
VLDLR-204ENST00000478776 KIAA1024Q9UPX6 916 aa7.4□□□□□ -1.22
VLDLR-204ENST00000478776 POM121CA8CG34 1229 aa7.39□□□□□ -1.23
VLDLR-204ENST00000478776 FAM229AH3BQW9 127 aa7.39□□□□□ -1.23
VLDLR-204ENST00000478776 LILRB5O75023 590 aa7.39□□□□□ -1.23
VLDLR-204ENST00000478776 ALBP02768 609 aa7.39□□□□□ -1.23
VLDLR-204ENST00000478776 ZNF594Q96JF6 807 aaPredicted RBP7.39□□□□□ -1.23
VLDLR-204ENST00000478776 SUSD3Q96L08 255 aa7.39□□□□□ -1.23
VLDLR-204ENST00000478776 MDFIQ99750 246 aa7.39□□□□□ -1.23
VLDLR-204ENST00000478776 KCNQ4P56696 695 aa7.38□□□□□ -1.23
VLDLR-204ENST00000478776 C8orf86Q6ZUL3 223 aa7.38□□□□□ -1.23
VLDLR-204ENST00000478776 TSEN2Q8NCE0 465 aaKnown RBP7.38□□□□□ -1.23
VLDLR-204ENST00000478776 UBE2OQ9C0C9 1292 aaKnown RBP7.38□□□□□ -1.23
VLDLR-204ENST00000478776 STARD13Q9Y3M8 1113 aa7.38□□□□□ -1.23
VLDLR-204ENST00000478776 SCO2A0A1W2PP80 73 aa7.37□□□□□ -1.23
VLDLR-204ENST00000478776 TYRO3Q06418 890 aa7.37□□□□□ -1.23
VLDLR-204ENST00000478776 ZNF280CQ8ND82 737 aa7.37□□□□□ -1.23
VLDLR-204ENST00000478776 CHMP7Q8WUX9 453 aaPredicted RBP7.37□□□□□ -1.23
VLDLR-204ENST00000478776 PNMA5Q96PV4 448 aa7.37□□□□□ -1.23
VLDLR-204ENST00000478776 ATAD2Q6PL18 1390 aa7.36□□□□□ -1.23
VLDLR-204ENST00000478776 C9orf172C9J069 976 aa7.36□□□□□ -1.23
VLDLR-204ENST00000478776 RASA1P20936 1047 aa7.36□□□□□ -1.23
VLDLR-204ENST00000478776 GRIK4Q16099 956 aa7.36□□□□□ -1.23
VLDLR-204ENST00000478776 RSPO4Q2I0M5 234 aaPredicted RBP7.36□□□□□ -1.23
VLDLR-204ENST00000478776 ALDH16A1Q8IZ83 802 aa7.36□□□□□ -1.23
VLDLR-204ENST00000478776 SIX5Q8N196 739 aa7.36□□□□□ -1.23
VLDLR-204ENST00000478776 GAS2L2Q8NHY3 880 aa7.36□□□□□ -1.23
VLDLR-204ENST00000478776 ADAMTS19Q8TE59 1207 aa7.36□□□□□ -1.23
VLDLR-204ENST00000478776 NGLY1Q96IV0 654 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms