RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PLEKHF1Q96S99 279 aa19.03■□□□□ 0.64
SMARCE1-209ENST00000478349 NIP7Q9Y221 180 aaKnown RBP eCLIP19.03■□□□□ 0.64
SMARCE1-209ENST00000478349 LTBP3Q9NS15 1303 aa19.02■□□□□ 0.64
SMARCE1-209ENST00000478349 BCORQ6W2J9 1755 aa19.02■□□□□ 0.64
SMARCE1-209ENST00000478349 SRGNP10124 158 aa19.02■□□□□ 0.64
SMARCE1-209ENST00000478349 GTF2E1P29083 439 aaPredicted RBP19.02■□□□□ 0.64
SMARCE1-209ENST00000478349 PIP4K2AP48426 406 aaPredicted RBP19.02■□□□□ 0.64
SMARCE1-209ENST00000478349 DPY19L2Q6NUT2 758 aa19.02■□□□□ 0.64
SMARCE1-209ENST00000478349 KIF6Q6ZMV9 814 aa19.02■□□□□ 0.64
SMARCE1-209ENST00000478349 TAOK3Q9H2K8 898 aa19.02■□□□□ 0.64
SMARCE1-209ENST00000478349 TNRC6CQ9HCJ0 1690 aaKnown RBP19.01■□□□□ 0.63
SMARCE1-209ENST00000478349 GLTPD2A6NH11 291 aa19.01■□□□□ 0.63
SMARCE1-209ENST00000478349 NFKBIEO00221 500 aa19.01■□□□□ 0.63
SMARCE1-209ENST00000478349 C21orf2O43822 256 aa19.01■□□□□ 0.63
SMARCE1-209ENST00000478349 SMC1BQ8NDV3 1235 aa19.01■□□□□ 0.63
SMARCE1-209ENST00000478349 NYXQ9GZU5 481 aa19.01■□□□□ 0.63
SMARCE1-209ENST00000478349 ERBB4Q15303 1308 aa19■□□□□ 0.63
SMARCE1-209ENST00000478349 NBPF26B4DH59 902 aa19■□□□□ 0.63
SMARCE1-209ENST00000478349 NPR1P16066 1061 aa19■□□□□ 0.63
SMARCE1-209ENST00000478349 PRPF40BQ6NWY9 871 aaKnown RBP19■□□□□ 0.63
SMARCE1-209ENST00000478349 NBPF10Q6P3W6 841 aaKnown RBP19■□□□□ 0.63
SMARCE1-209ENST00000478349 CCDC24Q8N4L8 307 aa19■□□□□ 0.63
SMARCE1-209ENST00000478349 NBPF15Q8N660 670 aa19■□□□□ 0.63
SMARCE1-209ENST00000478349 RRAGCQ9HB90 399 aa19■□□□□ 0.63
SMARCE1-209ENST00000478349 MIS18AQ9NYP9 233 aa19■□□□□ 0.63
SMARCE1-209ENST00000478349 ERVV-1B6SEH8 477 aa18.99■□□□□ 0.63
SMARCE1-209ENST00000478349 VEGFAP15692 232 aaPredicted RBP18.99■□□□□ 0.63
SMARCE1-209ENST00000478349 EIF4A1P60842 406 aaKnown RBP18.99■□□□□ 0.63
SMARCE1-209ENST00000478349 BABAM1Q9NWV8 329 aa18.99■□□□□ 0.63
SMARCE1-209ENST00000478349 ZNF219Q9P2Y4 722 aaPredicted RBP18.99■□□□□ 0.63
SMARCE1-209ENST00000478349 MYBBP1AQ9BQG0 1328 aaKnown RBP18.99■□□□□ 0.63
SMARCE1-209ENST00000478349 LAMB4A4D0S4 1761 aa18.98■□□□□ 0.63
SMARCE1-209ENST00000478349 ERFEQ4G0M1 354 aa18.98■□□□□ 0.63
SMARCE1-209ENST00000478349 CCDC93Q567U6 631 aa18.98■□□□□ 0.63
SMARCE1-209ENST00000478349 TSPYL4Q9UJ04 414 aa18.98■□□□□ 0.63
SMARCE1-209ENST00000478349 MAP3K15Q6ZN16 1313 aa18.97■□□□□ 0.63
SMARCE1-209ENST00000478349 ALDH1B1P30837 517 aa18.96■□□□□ 0.63
SMARCE1-209ENST00000478349 RIPK4P57078 832 aa18.96■□□□□ 0.63
SMARCE1-209ENST00000478349 WDR43Q15061 677 aaKnown RBP eCLIP18.96■□□□□ 0.63
SMARCE1-209ENST00000478349 RRP7AQ9Y3A4 280 aaKnown RBP18.96■□□□□ 0.63
SMARCE1-209ENST00000478349 IBTKQ9P2D0 1353 aaPredicted RBP18.95■□□□□ 0.62
SMARCE1-209ENST00000478349 ANKRD31Q8N7Z5 1873 aa18.95■□□□□ 0.62
SMARCE1-209ENST00000478349 KLRG2A4D1S0 409 aaPredicted RBP18.95■□□□□ 0.62
SMARCE1-209ENST00000478349 NGEFQ8N5V2 710 aa18.95■□□□□ 0.62
SMARCE1-209ENST00000478349 THUMPD2Q9BTF0 503 aaKnown RBP18.95■□□□□ 0.62
SMARCE1-209ENST00000478349 COL11A2P13942 1736 aaPredicted RBP18.94■□□□□ 0.62
SMARCE1-209ENST00000478349 KDM3BQ7LBC6 1761 aa18.94■□□□□ 0.62
SMARCE1-209ENST00000478349 RTKN2Q8IZC4 609 aa18.94■□□□□ 0.62
SMARCE1-209ENST00000478349 CEP350Q5VT06 3117 aa18.94■□□□□ 0.62
SMARCE1-209ENST00000478349 FAM177BA6PVY3 158 aa18.93■□□□□ 0.62
SMARCE1-209ENST00000478349 MYL6BP14649 208 aa18.93■□□□□ 0.62
SMARCE1-209ENST00000478349 DDX10Q13206 875 aaKnown RBP18.93■□□□□ 0.62
SMARCE1-209ENST00000478349 TIAM2Q8IVF5 1701 aa18.93■□□□□ 0.62
SMARCE1-209ENST00000478349 PRELPP51888 382 aa18.92■□□□□ 0.62
SMARCE1-209ENST00000478349 HLFQ16534 295 aa18.92■□□□□ 0.62
SMARCE1-209ENST00000478349 SBF1O95248 1867 aa18.92■□□□□ 0.62
SMARCE1-209ENST00000478349 RIC1Q4ADV7 1423 aa18.91■□□□□ 0.62
SMARCE1-209ENST00000478349 IQCA1LA6NCM1 817 aa18.91■□□□□ 0.62
SMARCE1-209ENST00000478349 TMPOP42166 694 aaKnown RBP18.91■□□□□ 0.62
SMARCE1-209ENST00000478349 FKBP4Q02790 459 aaKnown RBP eCLIP18.91■□□□□ 0.62
SMARCE1-209ENST00000478349 PARP10Q53GL7 1025 aa18.91■□□□□ 0.62
SMARCE1-209ENST00000478349 CC2D2BQ6DHV5 1058 aa18.91■□□□□ 0.62
SMARCE1-209ENST00000478349 RPGRQ92834 1020 aaKnown RBP18.91■□□□□ 0.62
SMARCE1-209ENST00000478349 GRIPAP1Q4V328 841 aa18.9■□□□□ 0.62
SMARCE1-209ENST00000478349 PPP1R42Q7Z4L9 355 aa18.9■□□□□ 0.62
SMARCE1-209ENST00000478349 ZBTB3Q9H5J0 574 aa18.9■□□□□ 0.62
SMARCE1-209ENST00000478349 CRY2Q49AN0 593 aa18.89■□□□□ 0.61
SMARCE1-209ENST00000478349 GIGYF2Q6Y7W6 1299 aaKnown RBP18.89■□□□□ 0.61
SMARCE1-209ENST00000478349 RUNDC1Q96C34 613 aa18.89■□□□□ 0.61
SMARCE1-209ENST00000478349 TMX4Q9H1E5 349 aaPredicted RBP18.89■□□□□ 0.61
SMARCE1-209ENST00000478349 ARFGEF2Q9Y6D5 1785 aa18.88■□□□□ 0.61
SMARCE1-209ENST00000478349 DLG5Q8TDM6 1919 aa18.88■□□□□ 0.61
SMARCE1-209ENST00000478349 HSP90AB3PQ58FF7 597 aa18.88■□□□□ 0.61
SMARCE1-209ENST00000478349 TTLL7Q6ZT98 887 aa18.88■□□□□ 0.61
SMARCE1-209ENST00000478349 C7orf43Q8WVR3 580 aa18.88■□□□□ 0.61
SMARCE1-209ENST00000478349 RNF123Q5XPI4 1314 aa18.88■□□□□ 0.61
SMARCE1-209ENST00000478349 EIF2S2P20042 333 aaKnown RBP18.87■□□□□ 0.61
SMARCE1-209ENST00000478349 GPTP24298 496 aa18.87■□□□□ 0.61
SMARCE1-209ENST00000478349 KLRG1Q96E93 195 aa18.87■□□□□ 0.61
SMARCE1-209ENST00000478349 FER1L6Q2WGJ9 1857 aa18.86■□□□□ 0.61
SMARCE1-209ENST00000478349 WDR90Q96KV7 1748 aa18.86■□□□□ 0.61
SMARCE1-209ENST00000478349 ABCC12Q96J65 1359 aa18.86■□□□□ 0.61
SMARCE1-209ENST00000478349 NUTM1Q86Y26 1132 aa18.86■□□□□ 0.61
SMARCE1-209ENST00000478349 RBM17Q96I25 401 aaKnown RBP18.86■□□□□ 0.61
SMARCE1-209ENST00000478349 NEUROD2Q15784 382 aa18.85■□□□□ 0.61
SMARCE1-209ENST00000478349 ZNF34Q8IZ26 560 aa18.85■□□□□ 0.61
SMARCE1-209ENST00000478349 DNAJC5GQ8N7S2 189 aa18.85■□□□□ 0.61
SMARCE1-209ENST00000478349 JDP2Q8WYK2 163 aa18.85■□□□□ 0.61
SMARCE1-209ENST00000478349 PSMD1Q99460 953 aa18.85■□□□□ 0.61
SMARCE1-209ENST00000478349 SLX4Q8IY92 1834 aa18.84■□□□□ 0.61
SMARCE1-209ENST00000478349 UBN2Q6ZU65 1347 aa18.84■□□□□ 0.61
SMARCE1-209ENST00000478349 HOXB7P09629 217 aa18.84■□□□□ 0.61
SMARCE1-209ENST00000478349 HOXA10P31260 410 aaPredicted RBP18.84■□□□□ 0.61
SMARCE1-209ENST00000478349 CCDC146Q8IYE0 955 aa18.84■□□□□ 0.61
SMARCE1-209ENST00000478349 L3MBTL3Q96JM7 780 aaPredicted RBP18.84■□□□□ 0.61
SMARCE1-209ENST00000478349 UTP14AQ9BVJ6 771 aaKnown RBP18.84■□□□□ 0.61
SMARCE1-209ENST00000478349 DDNO94850 711 aaPredicted RBP18.83■□□□□ 0.6
SMARCE1-209ENST00000478349 NTSR2O95665 410 aa18.83■□□□□ 0.6
SMARCE1-209ENST00000478349 IARSP41252 1262 aaKnown RBP18.83■□□□□ 0.6
SMARCE1-209ENST00000478349 CALD1Q05682 793 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms