RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 KIF3AQ9Y496 699 aa17.87■□□□□ 0.45
U2AF1-210ENST00000478282 SPATA31A3Q5VYP0 1347 aa17.86■□□□□ 0.45
U2AF1-210ENST00000478282 FAM208AQ9UK61 1670 aaKnown RBP17.85■□□□□ 0.45
U2AF1-210ENST00000478282 DMTNQ08495 405 aa17.85■□□□□ 0.45
U2AF1-210ENST00000478282 STK31Q9BXU1 1019 aa17.85■□□□□ 0.45
U2AF1-210ENST00000478282 N4BP2Q86UW6 1770 aaPredicted RBP17.85■□□□□ 0.45
U2AF1-210ENST00000478282 FUCA2Q9BTY2 467 aa17.85■□□□□ 0.45
U2AF1-210ENST00000478282 RAD50Q92878 1312 aa17.85■□□□□ 0.45
U2AF1-210ENST00000478282 STX6O43752 255 aa17.85■□□□□ 0.45
U2AF1-210ENST00000478282 TTC14Q96N46 770 aa17.85■□□□□ 0.45
U2AF1-210ENST00000478282 ABCC6O95255 1503 aa17.84■□□□□ 0.45
U2AF1-210ENST00000478282 COL18A1P39060 1754 aa17.84■□□□□ 0.45
U2AF1-210ENST00000478282 SYT1P21579 422 aa17.84■□□□□ 0.45
U2AF1-210ENST00000478282 F13A1P00488 732 aa17.83■□□□□ 0.45
U2AF1-210ENST00000478282 ZSCAN20P17040 1043 aaPredicted RBP17.83■□□□□ 0.45
U2AF1-210ENST00000478282 FLIIQ13045 1269 aa17.83■□□□□ 0.45
U2AF1-210ENST00000478282 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.83■□□□□ 0.45
U2AF1-210ENST00000478282 ATP6V1DQ9Y5K8 247 aa17.83■□□□□ 0.45
U2AF1-210ENST00000478282 HSP90AB2PQ58FF8 381 aa17.83■□□□□ 0.44
U2AF1-210ENST00000478282 RTF1Q92541 710 aaKnown RBP17.83■□□□□ 0.44
U2AF1-210ENST00000478282 SNX14Q9Y5W7 946 aa17.83■□□□□ 0.44
U2AF1-210ENST00000478282 LRRFIP2Q9Y608 721 aaKnown RBP17.83■□□□□ 0.44
U2AF1-210ENST00000478282 PHLPP1O60346 1717 aa17.83■□□□□ 0.44
U2AF1-210ENST00000478282 ABTB2Q8N961 1025 aa17.83■□□□□ 0.44
U2AF1-210ENST00000478282 DDX17Q92841 729 aaKnown RBP17.83■□□□□ 0.44
U2AF1-210ENST00000478282 FIBPO43427 364 aa17.82■□□□□ 0.44
U2AF1-210ENST00000478282 AK2P54819 239 aa17.82■□□□□ 0.44
U2AF1-210ENST00000478282 CACNA1FO60840 1977 aa17.82■□□□□ 0.44
U2AF1-210ENST00000478282 SGSM2O43147 1006 aa17.82■□□□□ 0.44
U2AF1-210ENST00000478282 TPRNQ4KMQ1 711 aa17.82■□□□□ 0.44
U2AF1-210ENST00000478282 KIAA1524Q8TCG1 905 aa17.82■□□□□ 0.44
U2AF1-210ENST00000478282 BCL2L12Q9HB09 334 aa17.82■□□□□ 0.44
U2AF1-210ENST00000478282 LIMCH1Q9UPQ0 1083 aa17.82■□□□□ 0.44
U2AF1-210ENST00000478282 CERKQ8TCT0 537 aa17.82■□□□□ 0.44
U2AF1-210ENST00000478282 TPM3P06753 285 aa17.81■□□□□ 0.44
U2AF1-210ENST00000478282 MTHFSDQ2M296 383 aaKnown RBP17.81■□□□□ 0.44
U2AF1-210ENST00000478282 GIMAP6Q6P9H5 292 aa17.81■□□□□ 0.44
U2AF1-210ENST00000478282 RUFY3Q7L099 469 aa17.81■□□□□ 0.44
U2AF1-210ENST00000478282 SMC3Q9UQE7 1217 aa17.81■□□□□ 0.44
U2AF1-210ENST00000478282 SOS1Q07889 1333 aaPredicted RBP17.81■□□□□ 0.44
U2AF1-210ENST00000478282 IL1RAPL2Q9NP60 686 aa17.81■□□□□ 0.44
U2AF1-210ENST00000478282 AP5Z1O43299 807 aa17.8■□□□□ 0.44
U2AF1-210ENST00000478282 NLRP6P59044 892 aa17.8■□□□□ 0.44
U2AF1-210ENST00000478282 KCNF1Q9H3M0 494 aa17.8■□□□□ 0.44
U2AF1-210ENST00000478282 MAP3K19Q56UN5 1328 aa17.8■□□□□ 0.44
U2AF1-210ENST00000478282 FAM177BA6PVY3 158 aa17.8■□□□□ 0.44
U2AF1-210ENST00000478282 PLCB2Q00722 1185 aa17.8■□□□□ 0.44
U2AF1-210ENST00000478282 PPP4R3BQ5MIZ7 849 aa17.8■□□□□ 0.44
U2AF1-210ENST00000478282 DIAPH3Q9NSV4 1193 aa17.8■□□□□ 0.44
U2AF1-210ENST00000478282 CCDC30Q5VVM6 783 aa17.8■□□□□ 0.44
U2AF1-210ENST00000478282 NUTM1Q86Y26 1132 aa17.8■□□□□ 0.44
U2AF1-210ENST00000478282 LSG1Q9H089 658 aaKnown RBP17.8■□□□□ 0.44
U2AF1-210ENST00000478282 PXDNLA1KZ92 1463 aa17.79■□□□□ 0.44
U2AF1-210ENST00000478282 PYCARDQ9ULZ3 195 aa17.79■□□□□ 0.44
U2AF1-210ENST00000478282 TOM1O60784 492 aa17.79■□□□□ 0.44
U2AF1-210ENST00000478282 RASEFQ8IZ41 740 aa17.79■□□□□ 0.44
U2AF1-210ENST00000478282 PI4K2BQ8TCG2 481 aa17.79■□□□□ 0.44
U2AF1-210ENST00000478282 ZHX1Q9UKY1 873 aaPredicted RBP17.79■□□□□ 0.44
U2AF1-210ENST00000478282 CAMTA1Q9Y6Y1 1673 aa17.79■□□□□ 0.44
U2AF1-210ENST00000478282 CBX1P83916 185 aa17.78■□□□□ 0.44
U2AF1-210ENST00000478282 CHAF1AQ13111 956 aaPredicted RBP17.78■□□□□ 0.44
U2AF1-210ENST00000478282 SSH3Q8TE77 659 aa17.78■□□□□ 0.44
U2AF1-210ENST00000478282 RAB11FIP3O75154 756 aa17.78■□□□□ 0.44
U2AF1-210ENST00000478282 MAP4K4O95819 1239 aaPredicted RBP17.78■□□□□ 0.44
U2AF1-210ENST00000478282 LRRC37A3O60309 1634 aa17.78■□□□□ 0.44
U2AF1-210ENST00000478282 ATP2B3Q16720 1220 aa17.78■□□□□ 0.44
U2AF1-210ENST00000478282 LARP6Q9BRS8 491 aaKnown RBP17.78■□□□□ 0.44
U2AF1-210ENST00000478282 USP44Q9H0E7 712 aa17.78■□□□□ 0.44
U2AF1-210ENST00000478282 UBTFL1P0CB47 393 aaPredicted RBP17.77■□□□□ 0.44
U2AF1-210ENST00000478282 KCNH5Q8NCM2 988 aa17.77■□□□□ 0.44
U2AF1-210ENST00000478282 GOLGA6L6A8MZA4 724 aa17.77■□□□□ 0.44
U2AF1-210ENST00000478282 DNM1Q05193 864 aaKnown RBP17.77■□□□□ 0.44
U2AF1-210ENST00000478282 LMO7Q8WWI1 1683 aa17.77■□□□□ 0.43
U2AF1-210ENST00000478282 RIOK3O14730 519 aaKnown RBP17.77■□□□□ 0.43
U2AF1-210ENST00000478282 PDCL2Q8N4E4 241 aa17.77■□□□□ 0.43
U2AF1-210ENST00000478282 GTPBP4Q9BZE4 634 aaKnown RBP17.77■□□□□ 0.43
U2AF1-210ENST00000478282 MTMR6Q9Y217 621 aa17.77■□□□□ 0.43
U2AF1-210ENST00000478282 CPDO75976 1380 aa17.76■□□□□ 0.43
U2AF1-210ENST00000478282 CNTROBQ8N137 903 aa17.76■□□□□ 0.43
U2AF1-210ENST00000478282 LARGE1O95461 756 aa17.75■□□□□ 0.43
U2AF1-210ENST00000478282 CCDC192P0DO97 292 aa17.75■□□□□ 0.43
U2AF1-210ENST00000478282 GJB2P29033 226 aa17.75■□□□□ 0.43
U2AF1-210ENST00000478282 KDRP35968 1356 aa17.75■□□□□ 0.43
U2AF1-210ENST00000478282 SPC24Q8NBT2 197 aa17.75■□□□□ 0.43
U2AF1-210ENST00000478282 ANKRD7Q92527 254 aa17.75■□□□□ 0.43
U2AF1-210ENST00000478282 FLT4P35916 1363 aa17.75■□□□□ 0.43
U2AF1-210ENST00000478282 RHPN1Q8TCX5 695 aa17.75■□□□□ 0.43
U2AF1-210ENST00000478282 NECTIN2Q92692 538 aa17.75■□□□□ 0.43
U2AF1-210ENST00000478282 HYPKQ9NX55 129 aa17.75■□□□□ 0.43
U2AF1-210ENST00000478282 SURF6O75683 361 aaKnown RBP17.74■□□□□ 0.43
U2AF1-210ENST00000478282 GCP02774 474 aa17.74■□□□□ 0.43
U2AF1-210ENST00000478282 CASTP20810 708 aaKnown RBP17.74■□□□□ 0.43
U2AF1-210ENST00000478282 CCDC83Q8IWF9 413 aa17.74■□□□□ 0.43
U2AF1-210ENST00000478282 CTIFO43310 598 aaKnown RBP17.74■□□□□ 0.43
U2AF1-210ENST00000478282 POLA2Q14181 598 aa17.74■□□□□ 0.43
U2AF1-210ENST00000478282 ARHGEF25Q86VW2 580 aa17.74■□□□□ 0.43
U2AF1-210ENST00000478282 RGPD5Q99666 1765 aa17.74■□□□□ 0.43
U2AF1-210ENST00000478282 PPP1R42Q7Z4L9 355 aa17.74■□□□□ 0.43
U2AF1-210ENST00000478282 CPA1P15085 419 aa17.73■□□□□ 0.43
U2AF1-210ENST00000478282 NCAPD2Q15021 1401 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms