RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 FCHSD1Q86WN1 690 aa10.1□□□□□ -0.79
SYCP3-205ENST00000478238 SIX5Q8N196 739 aa10.1□□□□□ -0.79
SYCP3-205ENST00000478238 ZNF594Q96JF6 807 aaPredicted RBP10.1□□□□□ -0.79
SYCP3-205ENST00000478238 GPC6Q9Y625 555 aaPredicted RBP10.1□□□□□ -0.79
SYCP3-205ENST00000478238 MSTNO14793 375 aa10.09□□□□□ -0.79
SYCP3-205ENST00000478238 COL8A1P27658 744 aa10.09□□□□□ -0.79
SYCP3-205ENST00000478238 ZNF468Q5VIY5 522 aaPredicted RBP10.09□□□□□ -0.79
SYCP3-205ENST00000478238 TFIP11Q9UBB9 837 aaKnown RBP10.09□□□□□ -0.79
SYCP3-205ENST00000478238 PRR12Q9ULL5 1215 aa10.09□□□□□ -0.79
SYCP3-205ENST00000478238 DKK1O94907 266 aa10.08□□□□□ -0.8
SYCP3-205ENST00000478238 DGKGP49619 791 aa10.08□□□□□ -0.8
SYCP3-205ENST00000478238 PCBP4P57723 403 aaKnown RBP10.08□□□□□ -0.8
SYCP3-205ENST00000478238 TSEN2Q8NCE0 465 aaKnown RBP10.08□□□□□ -0.8
SYCP3-205ENST00000478238 RHPN1Q8TCX5 695 aa10.08□□□□□ -0.8
SYCP3-205ENST00000478238 SPOCK3Q9BQ16 436 aa10.08□□□□□ -0.8
SYCP3-205ENST00000478238 NEUROD4Q9HD90 331 aa10.08□□□□□ -0.8
SYCP3-205ENST00000478238 CHMP3Q9Y3E7 222 aa10.08□□□□□ -0.8
SYCP3-205ENST00000478238 MAFBQ9Y5Q3 323 aaPredicted RBP10.08□□□□□ -0.8
SYCP3-205ENST00000478238 KRBA1A5PL33 1030 aa10.07□□□□□ -0.8
SYCP3-205ENST00000478238 SFI1A8K8P3 1242 aa10.07□□□□□ -0.8
SYCP3-205ENST00000478238 POTEAQ6S8J7 498 aa10.07□□□□□ -0.8
SYCP3-205ENST00000478238 CHSY3Q70JA7 882 aa10.07□□□□□ -0.8
SYCP3-205ENST00000478238 SUV39H2Q9H5I1 410 aa10.07□□□□□ -0.8
SYCP3-205ENST00000478238 RBM19Q9Y4C8 960 aaKnown RBP10.07□□□□□ -0.8
SYCP3-205ENST00000478238 GNB5O14775 395 aa10.06□□□□□ -0.8
SYCP3-205ENST00000478238 RASA1P20936 1047 aa10.06□□□□□ -0.8
SYCP3-205ENST00000478238 HIRAP54198 1017 aaPredicted RBP10.06□□□□□ -0.8
SYCP3-205ENST00000478238 ALYREFQ86V81 257 aaKnown RBP10.06□□□□□ -0.8
SYCP3-205ENST00000478238 HCN4Q9Y3Q4 1203 aa10.06□□□□□ -0.8
SYCP3-205ENST00000478238 LOC100996750A0A140TA64 210 aa10.05□□□□□ -0.8
SYCP3-205ENST00000478238 PIK3R2O00459 728 aa10.05□□□□□ -0.8
SYCP3-205ENST00000478238 PROCP04070 461 aa10.05□□□□□ -0.8
SYCP3-205ENST00000478238 GRIN2CQ14957 1233 aa10.05□□□□□ -0.8
SYCP3-205ENST00000478238 C1orf53Q5VUE5 145 aa10.05□□□□□ -0.8
SYCP3-205ENST00000478238 KRTAP4-6Q9BYQ5 205 aa10.05□□□□□ -0.8
SYCP3-205ENST00000478238 PHACTR1Q9C0D0 580 aa10.05□□□□□ -0.8
SYCP3-205ENST00000478238 PPP1R12BO60237 982 aaPredicted RBP10.04□□□□□ -0.8
SYCP3-205ENST00000478238 A6NJR5 290 aa10.03□□□□□ -0.8
SYCP3-205ENST00000478238 C21orf2O43822 256 aa10.03□□□□□ -0.8
SYCP3-205ENST00000478238 SFSWAPQ12872 951 aaKnown RBP10.03□□□□□ -0.8
SYCP3-205ENST00000478238 SYT9Q86SS6 491 aa10.03□□□□□ -0.8
SYCP3-205ENST00000478238 HSH2DQ96JZ2 352 aa10.03□□□□□ -0.8
SYCP3-205ENST00000478238 CALR3Q96L12 384 aaKnown RBP10.03□□□□□ -0.8
SYCP3-205ENST00000478238 SEC13P55735 322 aa10.02□□□□□ -0.81
SYCP3-205ENST00000478238 PPP1R12CQ9BZL4 782 aa10.02□□□□□ -0.81
SYCP3-205ENST00000478238 SLC30A3Q99726 388 aa10.01□□□□□ -0.81
SYCP3-205ENST00000478238 ANKIB1Q9P2G1 1089 aa10.01□□□□□ -0.81
SYCP3-205ENST00000478238 ATAD2Q6PL18 1390 aa10.01□□□□□ -0.81
SYCP3-205ENST00000478238 ELOA3CA0A087WX78 387 aaPredicted RBP10□□□□□ -0.81
SYCP3-205ENST00000478238 ELOA3DA6NLF2 546 aaPredicted RBP10□□□□□ -0.81
SYCP3-205ENST00000478238 ELOA3BQ3SY89 546 aa10□□□□□ -0.81
SYCP3-205ENST00000478238 LARP1Q6PKG0 1096 aaKnown RBP10□□□□□ -0.81
SYCP3-205ENST00000478238 STAG2Q8N3U4 1231 aa10□□□□□ -0.81
SYCP3-205ENST00000478238 ELOA3Q8NG57 546 aa10□□□□□ -0.81
SYCP3-205ENST00000478238 SCG3Q8WXD2 468 aaKnown RBP10□□□□□ -0.81
SYCP3-205ENST00000478238 CEP63Q96MT8 703 aa10□□□□□ -0.81
SYCP3-205ENST00000478238 MDFIQ99750 246 aa10□□□□□ -0.81
SYCP3-205ENST00000478238 BRD7Q9NPI1 651 aa10□□□□□ -0.81
SYCP3-205ENST00000478238 NOP53Q9NZM5 478 aaKnown RBP10□□□□□ -0.81
SYCP3-205ENST00000478238 SIN3BO75182 1162 aa9.99□□□□□ -0.81
SYCP3-205ENST00000478238 PTK7Q13308 1070 aa9.99□□□□□ -0.81
SYCP3-205ENST00000478238 CRTC2Q53ET0 693 aaPredicted RBP9.99□□□□□ -0.81
SYCP3-205ENST00000478238 KANK4Q5T7N3 995 aaPredicted RBP9.99□□□□□ -0.81
SYCP3-205ENST00000478238 ALDH16A1Q8IZ83 802 aa9.99□□□□□ -0.81
SYCP3-205ENST00000478238 ZNF280CQ8ND82 737 aa9.99□□□□□ -0.81
SYCP3-205ENST00000478238 GAS2L2Q8NHY3 880 aa9.99□□□□□ -0.81
SYCP3-205ENST00000478238 SUSD3Q96L08 255 aa9.99□□□□□ -0.81
SYCP3-205ENST00000478238 C2orf49Q9BVC5 232 aaPredicted RBP9.99□□□□□ -0.81
SYCP3-205ENST00000478238 TYRO3Q06418 890 aa9.98□□□□□ -0.81
SYCP3-205ENST00000478238 SPEM2Q0P670 501 aa9.98□□□□□ -0.81
SYCP3-205ENST00000478238 ALAS2P22557 587 aa9.97□□□□□ -0.81
SYCP3-205ENST00000478238 KCNQ4P56696 695 aa9.97□□□□□ -0.81
SYCP3-205ENST00000478238 DPYDQ12882 1025 aa9.97□□□□□ -0.81
SYCP3-205ENST00000478238 CHMP7Q8WUX9 453 aaPredicted RBP9.97□□□□□ -0.81
SYCP3-205ENST00000478238 ADARB2-AS1A8MUL3 147 aa9.96□□□□□ -0.82
SYCP3-205ENST00000478238 TNFRSF25Q93038 417 aa9.96□□□□□ -0.82
SYCP3-205ENST00000478238 TRIM11Q96F44 468 aa9.96□□□□□ -0.82
SYCP3-205ENST00000478238 NGLY1Q96IV0 654 aa9.96□□□□□ -0.82
SYCP3-205ENST00000478238 HINFPQ9BQA5 517 aa9.96□□□□□ -0.82
SYCP3-205ENST00000478238 KCNH4Q9UQ05 1017 aa9.96□□□□□ -0.82
SYCP3-205ENST00000478238 FAM196BA6NMK8 535 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 USP17L15C9J2P7 530 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 USP17L10C9JJH3 530 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 USP17L13C9JLJ4 530 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 USP17L12C9JPN9 530 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 USP17L11C9JVI0 530 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 USP17L21D6R901 530 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 USP17L18D6R9N7 530 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 USP17L22D6RA61 530 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 USP17L17D6RBQ6 530 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 USP17L19D6RCP7 530 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 USP17L20D6RJB6 530 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 LGR5O75473 907 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 LMOD1P29536 600 aaPredicted RBP9.95□□□□□ -0.82
SYCP3-205ENST00000478238 USP17L24Q0WX57 530 aa9.95□□□□□ -0.82
SYCP3-205ENST00000478238 RAB44Q7Z6P3 723 aaPredicted RBP9.95□□□□□ -0.82
SYCP3-205ENST00000478238 ADAM23O75077 832 aa9.94□□□□□ -0.82
SYCP3-205ENST00000478238 BAG6P46379 1132 aa9.94□□□□□ -0.82
SYCP3-205ENST00000478238 NEUROD1Q13562 356 aa9.94□□□□□ -0.82
SYCP3-205ENST00000478238 ANKMY2Q8IV38 441 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms