RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 NPM2Q86SE8 214 aaKnown RBP16.86■□□□□ 0.29
LMNA-214ENST00000478063 CNTNAP4Q9C0A0 1308 aa16.86■□□□□ 0.29
LMNA-214ENST00000478063 IL6STP40189 918 aaPredicted RBP16.85■□□□□ 0.29
LMNA-214ENST00000478063 TTLL7Q6ZT98 887 aa16.85■□□□□ 0.29
LMNA-214ENST00000478063 ANKRD13DQ6ZTN6 518 aa16.85■□□□□ 0.29
LMNA-214ENST00000478063 SCN7AQ01118 1682 aa16.85■□□□□ 0.29
LMNA-214ENST00000478063 SLC27A3Q5K4L6 730 aa16.84■□□□□ 0.29
LMNA-214ENST00000478063 KIF6Q6ZMV9 814 aa16.84■□□□□ 0.29
LMNA-214ENST00000478063 ARXQ96QS3 562 aa16.84■□□□□ 0.29
LMNA-214ENST00000478063 PPP4R2Q9NY27 417 aa16.84■□□□□ 0.29
LMNA-214ENST00000478063 ATP10DQ9P241 1426 aa16.84■□□□□ 0.29
LMNA-214ENST00000478063 PLSCR1O15162 318 aa16.83■□□□□ 0.28
LMNA-214ENST00000478063 PLBD2Q8NHP8 589 aa16.83■□□□□ 0.28
LMNA-214ENST00000478063 SRCIN1Q9C0H9 1055 aa16.83■□□□□ 0.28
LMNA-214ENST00000478063 ZBTB3Q9H5J0 574 aa16.83■□□□□ 0.28
LMNA-214ENST00000478063 LRRC4BQ9NT99 713 aa16.83■□□□□ 0.28
LMNA-214ENST00000478063 COL15A1P39059 1388 aa16.82■□□□□ 0.28
LMNA-214ENST00000478063 NEXNQ0ZGT2 675 aa16.82■□□□□ 0.28
LMNA-214ENST00000478063 TXNRD1Q16881 649 aa16.82■□□□□ 0.28
LMNA-214ENST00000478063 RC3H1Q5TC82 1133 aaKnown RBP16.82■□□□□ 0.28
LMNA-214ENST00000478063 CHMP4BQ9H444 224 aaKnown RBP16.82■□□□□ 0.28
LMNA-214ENST00000478063 MAP3K15Q6ZN16 1313 aa16.81■□□□□ 0.28
LMNA-214ENST00000478063 EIF5P55010 431 aaKnown RBP16.81■□□□□ 0.28
LMNA-214ENST00000478063 BEND3Q5T5X7 828 aa16.81■□□□□ 0.28
LMNA-214ENST00000478063 DZIP3Q86Y13 1208 aaKnown RBP16.81■□□□□ 0.28
LMNA-214ENST00000478063 MYD88Q99836 296 aa16.81■□□□□ 0.28
LMNA-214ENST00000478063 METTL22Q9BUU2 404 aaPredicted RBP16.81■□□□□ 0.28
LMNA-214ENST00000478063 GNPATO15228 680 aa16.8■□□□□ 0.28
LMNA-214ENST00000478063 SF3B2Q13435 895 aaKnown RBP16.8■□□□□ 0.28
LMNA-214ENST00000478063 AAMPQ13685 434 aa16.8■□□□□ 0.28
LMNA-214ENST00000478063 LINS1Q8NG48 757 aa16.8■□□□□ 0.28
LMNA-214ENST00000478063 AK7Q96M32 723 aa16.8■□□□□ 0.28
LMNA-214ENST00000478063 ZBTB7BO15156 539 aaPredicted RBP16.79■□□□□ 0.28
LMNA-214ENST00000478063 RPS6KA4O75676 772 aa16.79■□□□□ 0.28
LMNA-214ENST00000478063 ALDH1L1O75891 902 aa16.79■□□□□ 0.28
LMNA-214ENST00000478063 CCDC136Q96JN2 1154 aa16.79■□□□□ 0.28
LMNA-214ENST00000478063 TBC1D2BQ9UPU7 963 aa16.79■□□□□ 0.28
LMNA-214ENST00000478063 MYH3P11055 1940 aa16.78■□□□□ 0.28
LMNA-214ENST00000478063 A0A087WZG4 1122 aa16.78■□□□□ 0.28
LMNA-214ENST00000478063 HMGB2P26583 209 aaKnown RBP16.78■□□□□ 0.28
LMNA-214ENST00000478063 CWF19L2Q2TBE0 894 aaKnown RBP16.78■□□□□ 0.28
LMNA-214ENST00000478063 B4GALNT3Q6L9W6 998 aa16.78■□□□□ 0.28
LMNA-214ENST00000478063 PROM2Q8N271 834 aa16.78■□□□□ 0.28
LMNA-214ENST00000478063 MEIS3Q99687 375 aa16.78■□□□□ 0.28
LMNA-214ENST00000478063 ZBTB40Q9NUA8 1239 aa16.78■□□□□ 0.28
LMNA-214ENST00000478063 RTCBQ9Y3I0 505 aaKnown RBP16.78■□□□□ 0.28
LMNA-214ENST00000478063 QSER1Q2KHR3 1735 aa16.77■□□□□ 0.28
LMNA-214ENST00000478063 CASZ1Q86V15 1759 aa16.77■□□□□ 0.27
LMNA-214ENST00000478063 NEURL1BA8MQ27 555 aa16.76■□□□□ 0.27
LMNA-214ENST00000478063 ERVV-1B6SEH8 477 aa16.76■□□□□ 0.27
LMNA-214ENST00000478063 ATP5J2-PTCD1G3V325 749 aa16.76■□□□□ 0.27
LMNA-214ENST00000478063 IGKV5-2P06315 115 aa16.76■□□□□ 0.27
LMNA-214ENST00000478063 GNAI3P08754 354 aa16.76■□□□□ 0.27
LMNA-214ENST00000478063 BAG6P46379 1132 aa16.76■□□□□ 0.27
LMNA-214ENST00000478063 GIGYF2Q6Y7W6 1299 aaKnown RBP16.76■□□□□ 0.27
LMNA-214ENST00000478063 C1orf115Q9H7X2 142 aa16.76■□□□□ 0.27
LMNA-214ENST00000478063 CAMTA2O94983 1202 aa16.75■□□□□ 0.27
LMNA-214ENST00000478063 EN1Q05925 392 aaPredicted RBP16.75■□□□□ 0.27
LMNA-214ENST00000478063 HLFQ16534 295 aa16.75■□□□□ 0.27
LMNA-214ENST00000478063 HSP90AB3PQ58FF7 597 aa16.75■□□□□ 0.27
LMNA-214ENST00000478063 SMIM5Q71RC9 77 aa16.75■□□□□ 0.27
LMNA-214ENST00000478063 C9orf78Q9NZ63 289 aaPredicted RBP16.75■□□□□ 0.27
LMNA-214ENST00000478063 PHF14O94880 888 aa16.74■□□□□ 0.27
LMNA-214ENST00000478063 UBTFL1P0CB47 393 aaPredicted RBP16.74■□□□□ 0.27
LMNA-214ENST00000478063 TCIRG1Q13488 830 aa16.74■□□□□ 0.27
LMNA-214ENST00000478063 EZH2Q15910 746 aaKnown RBP16.74■□□□□ 0.27
LMNA-214ENST00000478063 USP44Q9H0E7 712 aa16.74■□□□□ 0.27
LMNA-214ENST00000478063 PCDHB15Q9Y5E8 787 aa16.74■□□□□ 0.27
LMNA-214ENST00000478063 IBTKQ9P2D0 1353 aaPredicted RBP16.74■□□□□ 0.27
LMNA-214ENST00000478063 LAMB2P55268 1798 aa16.74■□□□□ 0.27
LMNA-214ENST00000478063 COL24A1Q17RW2 1714 aa16.73■□□□□ 0.27
LMNA-214ENST00000478063 GRM8O00222 908 aa16.73■□□□□ 0.27
LMNA-214ENST00000478063 GCKRQ14397 625 aa16.73■□□□□ 0.27
LMNA-214ENST00000478063 CAMKK2Q96RR4 588 aa16.73■□□□□ 0.27
LMNA-214ENST00000478063 CWC25Q9NXE8 425 aaPredicted RBP16.73■□□□□ 0.27
LMNA-214ENST00000478063 ZNF652Q9Y2D9 606 aa16.73■□□□□ 0.27
LMNA-214ENST00000478063 GNAI2P04899 355 aa16.72■□□□□ 0.27
LMNA-214ENST00000478063 GPTP24298 496 aa16.72■□□□□ 0.27
LMNA-214ENST00000478063 TRAPPC3LQ5T215 181 aa16.72■□□□□ 0.27
LMNA-214ENST00000478063 AMIGO3Q86WK7 504 aa16.72■□□□□ 0.27
LMNA-214ENST00000478063 ISCA1Q9BUE6 129 aa16.72■□□□□ 0.27
LMNA-214ENST00000478063 ZPR1O75312 459 aa16.71■□□□□ 0.27
LMNA-214ENST00000478063 NBPF7P0C2Y1 421 aaPredicted RBP16.71■□□□□ 0.27
LMNA-214ENST00000478063 ADRA2BP18089 450 aa16.71■□□□□ 0.27
LMNA-214ENST00000478063 SSFA2P28290 1259 aa16.71■□□□□ 0.27
LMNA-214ENST00000478063 RFC4P35249 363 aa16.71■□□□□ 0.27
LMNA-214ENST00000478063 ZNF827Q17R98 1081 aa16.71■□□□□ 0.27
LMNA-214ENST00000478063 DEFB132Q7Z7B7 95 aa16.71■□□□□ 0.27
LMNA-214ENST00000478063 CCDC125Q86Z20 511 aa16.71■□□□□ 0.27
LMNA-214ENST00000478063 CCDC191Q8NCU4 936 aa16.71■□□□□ 0.27
LMNA-214ENST00000478063 ARHGEF1Q92888 912 aaKnown RBP16.71■□□□□ 0.27
LMNA-214ENST00000478063 SRP68Q9UHB9 627 aaKnown RBP16.71■□□□□ 0.27
LMNA-214ENST00000478063 NARFQ9UHQ1 456 aa16.71■□□□□ 0.27
LMNA-214ENST00000478063 LRRFIP2Q9Y608 721 aaKnown RBP16.71■□□□□ 0.27
LMNA-214ENST00000478063 DDX60Q8IY21 1712 aaKnown RBP16.7■□□□□ 0.26
LMNA-214ENST00000478063 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.7■□□□□ 0.26
LMNA-214ENST00000478063 USPL1Q5W0Q7 1092 aa16.7■□□□□ 0.26
LMNA-214ENST00000478063 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
LMNA-214ENST00000478063 TFCP2L1Q9NZI6 479 aa16.7■□□□□ 0.26
LMNA-214ENST00000478063 UTYO14607 1347 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms