RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 ADGRL3Q9HAR2 1447 aa16.2■□□□□ 0.18
HLA-DMA-208ENST00000477541 GLRX3O76003 335 aaKnown RBP16.19■□□□□ 0.18
HLA-DMA-208ENST00000477541 CHAF1AQ13111 956 aaPredicted RBP16.19■□□□□ 0.18
HLA-DMA-208ENST00000477541 PIK3C2AO00443 1686 aa16.19■□□□□ 0.18
HLA-DMA-208ENST00000477541 ROBO1Q9Y6N7 1651 aa16.19■□□□□ 0.18
HLA-DMA-208ENST00000477541 ELP1O95163 1332 aa16.19■□□□□ 0.18
HLA-DMA-208ENST00000477541 AK2P54819 239 aa16.19■□□□□ 0.18
HLA-DMA-208ENST00000477541 TAF7Q15545 349 aaPredicted RBP16.19■□□□□ 0.18
HLA-DMA-208ENST00000477541 TSHZ3Q63HK5 1081 aa16.19■□□□□ 0.18
HLA-DMA-208ENST00000477541 UNC5CLQ8IV45 518 aa16.19■□□□□ 0.18
HLA-DMA-208ENST00000477541 CNPY2Q9Y2B0 182 aa16.19■□□□□ 0.18
HLA-DMA-208ENST00000477541 KIF3AQ9Y496 699 aa16.19■□□□□ 0.18
HLA-DMA-208ENST00000477541 NWD1Q149M9 1564 aa16.18■□□□□ 0.18
HLA-DMA-208ENST00000477541 KDM3BQ7LBC6 1761 aa16.18■□□□□ 0.18
HLA-DMA-208ENST00000477541 HIP1O00291 1037 aa16.17■□□□□ 0.18
HLA-DMA-208ENST00000477541 CCDC192P0DO97 292 aa16.17■□□□□ 0.18
HLA-DMA-208ENST00000477541 HCLS1P14317 486 aaPredicted RBP16.17■□□□□ 0.18
HLA-DMA-208ENST00000477541 EYA1Q99502 592 aa16.17■□□□□ 0.18
HLA-DMA-208ENST00000477541 MIS18AQ9NYP9 233 aa16.17■□□□□ 0.18
HLA-DMA-208ENST00000477541 FOXO3O43524 673 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 SURF6O75683 361 aaKnown RBP16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 PDCP20941 246 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 MTX1Q13505 466 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 NOL8Q76FK4 1167 aaKnown RBP16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 RUFY3Q7L099 469 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 GPATCH3Q96I76 525 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 GDPD2Q9HCC8 539 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 ARHGAP23Q9P227 1491 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 ANKARQ7Z5J8 1434 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 JCADQ9P266 1359 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 SLIT1O75093 1534 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 AMPHP49418 695 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 PPP1R42Q7Z4L9 355 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 ERC1Q8IUD2 1116 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 KIAA1524Q8TCG1 905 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 ZSWIM6Q9HCJ5 1215 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 HYPKQ9NX55 129 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 PRDM4Q9UKN5 801 aa16.16■□□□□ 0.18
HLA-DMA-208ENST00000477541 SYCP1Q15431 976 aa16.15■□□□□ 0.18
HLA-DMA-208ENST00000477541 ALDH8A1Q9H2A2 487 aaPredicted RBP16.15■□□□□ 0.18
HLA-DMA-208ENST00000477541 MTMR6Q9Y217 621 aa16.15■□□□□ 0.18
HLA-DMA-208ENST00000477541 MARF1Q9Y4F3 1742 aaKnown RBP16.14■□□□□ 0.17
HLA-DMA-208ENST00000477541 CAVIN2O95810 425 aa16.14■□□□□ 0.17
HLA-DMA-208ENST00000477541 CYP46A1Q9Y6A2 500 aa16.14■□□□□ 0.17
HLA-DMA-208ENST00000477541 ANKRD1Q15327 319 aa16.14■□□□□ 0.17
HLA-DMA-208ENST00000477541 HDGFL1Q5TGJ6 251 aa16.14■□□□□ 0.17
HLA-DMA-208ENST00000477541 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.14■□□□□ 0.17
HLA-DMA-208ENST00000477541 FAM200AQ8TCP9 573 aa16.14■□□□□ 0.17
HLA-DMA-208ENST00000477541 SNRKQ9NRH2 765 aa16.14■□□□□ 0.17
HLA-DMA-208ENST00000477541 PDRG1Q9NUG6 133 aa16.14■□□□□ 0.17
HLA-DMA-208ENST00000477541 TMEM94Q12767 1356 aa16.13■□□□□ 0.17
HLA-DMA-208ENST00000477541 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
HLA-DMA-208ENST00000477541 ZKSCAN1P17029 563 aaPredicted RBP16.13■□□□□ 0.17
HLA-DMA-208ENST00000477541 PSMA5P28066 241 aa16.13■□□□□ 0.17
HLA-DMA-208ENST00000477541 GJB2P29033 226 aa16.13■□□□□ 0.17
HLA-DMA-208ENST00000477541 LTKP29376 864 aa16.13■□□□□ 0.17
HLA-DMA-208ENST00000477541 KRT85P78386 507 aa16.13■□□□□ 0.17
HLA-DMA-208ENST00000477541 ZNF772Q68DY9 489 aaPredicted RBP16.13■□□□□ 0.17
HLA-DMA-208ENST00000477541 NUTM1Q86Y26 1132 aa16.13■□□□□ 0.17
HLA-DMA-208ENST00000477541 GTPBP4Q9BZE4 634 aaKnown RBP16.13■□□□□ 0.17
HLA-DMA-208ENST00000477541 IL25Q9H293 177 aa16.13■□□□□ 0.17
HLA-DMA-208ENST00000477541 IL1RAPL2Q9NP60 686 aa16.13■□□□□ 0.17
HLA-DMA-208ENST00000477541 SRGAP3O43295 1099 aa16.12■□□□□ 0.17
HLA-DMA-208ENST00000477541 FIBPO43427 364 aa16.12■□□□□ 0.17
HLA-DMA-208ENST00000477541 CASTP20810 708 aaKnown RBP16.12■□□□□ 0.17
HLA-DMA-208ENST00000477541 LMO7Q8WWI1 1683 aa16.11■□□□□ 0.17
HLA-DMA-208ENST00000477541 RASEFQ8IZ41 740 aa16.11■□□□□ 0.17
HLA-DMA-208ENST00000477541 CLASRPQ8N2M8 674 aaKnown RBP16.11■□□□□ 0.17
HLA-DMA-208ENST00000477541 EVI5LQ96CN4 794 aa16.11■□□□□ 0.17
HLA-DMA-208ENST00000477541 SCAND2PQ9GZW5 306 aaPredicted RBP16.11■□□□□ 0.17
HLA-DMA-208ENST00000477541 TTC12Q9H892 705 aaPredicted RBP16.11■□□□□ 0.17
HLA-DMA-208ENST00000477541 OVOS2A0A0G2JMS6 1433 aa16.11■□□□□ 0.17
HLA-DMA-208ENST00000477541 ALDH1L1O75891 902 aa16.11■□□□□ 0.17
HLA-DMA-208ENST00000477541 DMTNQ08495 405 aa16.11■□□□□ 0.17
HLA-DMA-208ENST00000477541 MAP3K11Q16584 847 aa16.11■□□□□ 0.17
HLA-DMA-208ENST00000477541 ECHDC1Q9NTX5 307 aa16.11■□□□□ 0.17
HLA-DMA-208ENST00000477541 DDX19AQ9NUU7 478 aaKnown RBP16.11■□□□□ 0.17
HLA-DMA-208ENST00000477541 PHLPP1O60346 1717 aa16.1■□□□□ 0.17
HLA-DMA-208ENST00000477541 CTIFO43310 598 aaKnown RBP16.1■□□□□ 0.17
HLA-DMA-208ENST00000477541 BEND3Q5T5X7 828 aa16.1■□□□□ 0.17
HLA-DMA-208ENST00000477541 IL17REQ8NFR9 667 aa16.1■□□□□ 0.17
HLA-DMA-208ENST00000477541 DNAAF4Q8WXU2 420 aa16.1■□□□□ 0.17
HLA-DMA-208ENST00000477541 SRCAPQ6ZRS2 3230 aa16.1■□□□□ 0.17
HLA-DMA-208ENST00000477541 RBM43Q6ZSC3 357 aaKnown RBP16.09■□□□□ 0.17
HLA-DMA-208ENST00000477541 ZNF710Q8N1W2 664 aa16.09■□□□□ 0.17
HLA-DMA-208ENST00000477541 NUP62CLQ9H1M0 184 aa16.09■□□□□ 0.17
HLA-DMA-208ENST00000477541 SPATA31A6Q5VVP1 1343 aa16.09■□□□□ 0.17
HLA-DMA-208ENST00000477541 NPHP3Q7Z494 1330 aa16.09■□□□□ 0.17
HLA-DMA-208ENST00000477541 PHRF1Q9P1Y6 1649 aaKnown RBP16.09■□□□□ 0.17
HLA-DMA-208ENST00000477541 HOXC9P31274 260 aa16.08■□□□□ 0.17
HLA-DMA-208ENST00000477541 DNM1Q05193 864 aaKnown RBP16.08■□□□□ 0.17
HLA-DMA-208ENST00000477541 NECTIN1Q15223 517 aa16.08■□□□□ 0.17
HLA-DMA-208ENST00000477541 FOXD4L6Q3SYB3 417 aaPredicted RBP16.08■□□□□ 0.17
HLA-DMA-208ENST00000477541 RNF20Q5VTR2 975 aa16.08■□□□□ 0.17
HLA-DMA-208ENST00000477541 CWC27Q6UX04 472 aaKnown RBP16.08■□□□□ 0.17
HLA-DMA-208ENST00000477541 FOXD4L3Q6VB84 417 aaPredicted RBP16.08■□□□□ 0.17
HLA-DMA-208ENST00000477541 CCDC83Q8IWF9 413 aa16.08■□□□□ 0.17
HLA-DMA-208ENST00000477541 ANKRD7Q92527 254 aa16.08■□□□□ 0.17
HLA-DMA-208ENST00000477541 JAKMIP1Q96N16 626 aaKnown RBP16.08■□□□□ 0.17
HLA-DMA-208ENST00000477541 NCAPD2Q15021 1401 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms