RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 NEXNQ0ZGT2 675 aa36.19■■■■□ 3.38
VEGFA-211ENST00000476772 COL5A3P25940 1745 aaPredicted RBP36.19■■■■□ 3.38
VEGFA-211ENST00000476772 IGKV5-2P06315 115 aa36.19■■■■□ 3.38
VEGFA-211ENST00000476772 CEP85Q6P2H3 762 aa36.19■■■■□ 3.38
VEGFA-211ENST00000476772 RGS17Q9UGC6 210 aaPredicted RBP36.19■■■■□ 3.38
VEGFA-211ENST00000476772 UBTFL1P0CB47 393 aaPredicted RBP36.18■■■■□ 3.38
VEGFA-211ENST00000476772 ANKRD44Q8N8A2 993 aa36.18■■■■□ 3.38
VEGFA-211ENST00000476772 RREB1Q92766 1687 aa36.18■■■■□ 3.38
VEGFA-211ENST00000476772 RXRBP28702 533 aa36.17■■■■□ 3.38
VEGFA-211ENST00000476772 FAM196AQ6ZSG2 479 aa36.17■■■■□ 3.38
VEGFA-211ENST00000476772 SKAP1Q86WV1 359 aa36.17■■■■□ 3.38
VEGFA-211ENST00000476772 RPAP2Q8IXW5 612 aaPredicted RBP36.16■■■■□ 3.38
VEGFA-211ENST00000476772 ZBTB3Q9H5J0 574 aa36.16■■■■□ 3.38
VEGFA-211ENST00000476772 NBPF7P0C2Y1 421 aaPredicted RBP36.15■■■■□ 3.38
VEGFA-211ENST00000476772 CRKLP46109 303 aaKnown RBP36.15■■■■□ 3.38
VEGFA-211ENST00000476772 INTS5Q6P9B9 1019 aaKnown RBP36.15■■■■□ 3.38
VEGFA-211ENST00000476772 CCDC87Q9NVE4 849 aa36.15■■■■□ 3.38
VEGFA-211ENST00000476772 AFDNP55196 1824 aaKnown RBP36.15■■■■□ 3.38
VEGFA-211ENST00000476772 NEURL1BA8MQ27 555 aa36.14■■■■□ 3.38
VEGFA-211ENST00000476772 BCL11BQ9C0K0 894 aaPredicted RBP36.14■■■■□ 3.38
VEGFA-211ENST00000476772 LRRFIP2Q9Y608 721 aaKnown RBP36.14■■■■□ 3.38
VEGFA-211ENST00000476772 IL6STP40189 918 aaPredicted RBP36.13■■■■□ 3.37
VEGFA-211ENST00000476772 LY75O60449 1722 aa36.13■■■■□ 3.37
VEGFA-211ENST00000476772 IBTKQ9P2D0 1353 aaPredicted RBP36.12■■■■□ 3.37
VEGFA-211ENST00000476772 MYH14Q7Z406 1995 aaKnown RBP36.12■■■■□ 3.37
VEGFA-211ENST00000476772 SMC5Q8IY18 1101 aa36.12■■■■□ 3.37
VEGFA-211ENST00000476772 C9orf78Q9NZ63 289 aaPredicted RBP36.12■■■■□ 3.37
VEGFA-211ENST00000476772 KIF6Q6ZMV9 814 aa36.11■■■■□ 3.37
VEGFA-211ENST00000476772 KCNQ4P56696 695 aa36.1■■■■□ 3.37
VEGFA-211ENST00000476772 LINC00116Q8NCU8 138 aa36.1■■■■□ 3.37
VEGFA-211ENST00000476772 ATP5J2-PTCD1G3V325 749 aa36.09■■■■□ 3.37
VEGFA-211ENST00000476772 GRM8O00222 908 aa36.09■■■■□ 3.37
VEGFA-211ENST00000476772 POTEAQ6S8J7 498 aa36.09■■■■□ 3.37
VEGFA-211ENST00000476772 GCKRQ14397 625 aa36.08■■■■□ 3.37
VEGFA-211ENST00000476772 UTYO14607 1347 aa36.07■■■■□ 3.37
VEGFA-211ENST00000476772 MAP3K15Q6ZN16 1313 aa36.07■■■■□ 3.37
VEGFA-211ENST00000476772 ARXQ96QS3 562 aa36.07■■■■□ 3.37
VEGFA-211ENST00000476772 PDZRN3Q9UPQ7 1066 aa36.07■■■■□ 3.37
VEGFA-211ENST00000476772 EIF5P55010 431 aaKnown RBP36.07■■■■□ 3.36
VEGFA-211ENST00000476772 GCC1Q96CN9 775 aa36.05■■■■□ 3.36
VEGFA-211ENST00000476772 CCNL1Q9UK58 526 aaPredicted RBP36.05■■■■□ 3.36
VEGFA-211ENST00000476772 NPM2Q86SE8 214 aaKnown RBP36.04■■■■□ 3.36
VEGFA-211ENST00000476772 HMMRO75330 724 aa36.03■■■■□ 3.36
VEGFA-211ENST00000476772 TRIM37O94972 964 aa36.03■■■■□ 3.36
VEGFA-211ENST00000476772 ATP8B2P98198 1209 aa36.03■■■■□ 3.36
VEGFA-211ENST00000476772 DZIP3Q86Y13 1208 aaKnown RBP36.03■■■■□ 3.36
VEGFA-211ENST00000476772 CNTNAP4Q9C0A0 1308 aa36.02■■■■□ 3.36
VEGFA-211ENST00000476772 PNMA6EA0A0J9YXQ4 647 aa36.01■■■■□ 3.36
VEGFA-211ENST00000476772 TAF1LQ8IZX4 1826 aa36.01■■■■□ 3.35
VEGFA-211ENST00000476772 TCIRG1Q13488 830 aa36■■■■□ 3.35
VEGFA-211ENST00000476772 DCTPP1Q9H773 170 aa36■■■■□ 3.35
VEGFA-211ENST00000476772 TBC1D2BQ9UPU7 963 aa36■■■■□ 3.35
VEGFA-211ENST00000476772 HLFQ16534 295 aa36■■■■□ 3.35
VEGFA-211ENST00000476772 GIGYF2Q6Y7W6 1299 aaKnown RBP36■■■■□ 3.35
VEGFA-211ENST00000476772 SUCLG2Q96I99 432 aa36■■■■□ 3.35
VEGFA-211ENST00000476772 HDAC5Q9UQL6 1122 aa36■■■■□ 3.35
VEGFA-211ENST00000476772 RGS3P49796 1198 aa35.99■■■■□ 3.35
VEGFA-211ENST00000476772 ISCA1Q9BUE6 129 aa35.99■■■■□ 3.35
VEGFA-211ENST00000476772 CWC25Q9NXE8 425 aaPredicted RBP35.99■■■■□ 3.35
VEGFA-211ENST00000476772 ANKRD36CQ5JPF3 1778 aa35.98■■■■□ 3.35
VEGFA-211ENST00000476772 EP400Q96L91 3159 aa35.98■■■■□ 3.35
VEGFA-211ENST00000476772 CCDC191Q8NCU4 936 aa35.97■■■■□ 3.35
VEGFA-211ENST00000476772 NUP98P52948 1817 aa35.97■■■■□ 3.35
VEGFA-211ENST00000476772 COL15A1P39059 1388 aa35.97■■■■□ 3.35
VEGFA-211ENST00000476772 A0A087WZG4 1122 aa35.97■■■■□ 3.35
VEGFA-211ENST00000476772 ERVV-1B6SEH8 477 aa35.97■■■■□ 3.35
VEGFA-211ENST00000476772 NUCB1Q02818 461 aa35.97■■■■□ 3.35
VEGFA-211ENST00000476772 PPP1R42Q7Z4L9 355 aa35.96■■■■□ 3.35
VEGFA-211ENST00000476772 JARID2Q92833 1246 aaPredicted RBP35.96■■■■□ 3.35
VEGFA-211ENST00000476772 KAZALD1Q96I82 304 aa35.96■■■■□ 3.35
VEGFA-211ENST00000476772 RC3H1Q5TC82 1133 aaKnown RBP35.95■■■■□ 3.35
VEGFA-211ENST00000476772 UBE3BQ7Z3V4 1068 aa35.95■■■■□ 3.35
VEGFA-211ENST00000476772 HSP90AB3PQ58FF7 597 aa35.94■■■■□ 3.34
VEGFA-211ENST00000476772 SSH3Q8TE77 659 aa35.94■■■■□ 3.34
VEGFA-211ENST00000476772 CASP7P55210 303 aa35.93■■■■□ 3.34
VEGFA-211ENST00000476772 TRIM28Q13263 835 aaKnown RBP35.93■■■■□ 3.34
VEGFA-211ENST00000476772 ANKRD45Q5TZF3 282 aa35.93■■■■□ 3.34
VEGFA-211ENST00000476772 BICC1Q9H694 974 aaKnown RBP35.93■■■■□ 3.34
VEGFA-211ENST00000476772 MTX1Q13505 466 aa35.92■■■■□ 3.34
VEGFA-211ENST00000476772 POLA2Q14181 598 aa35.92■■■■□ 3.34
VEGFA-211ENST00000476772 CHD1LQ86WJ1 897 aa35.92■■■■□ 3.34
VEGFA-211ENST00000476772 C4BP0C0L5 1744 aa35.92■■■■□ 3.34
VEGFA-211ENST00000476772 H7C1W4 665 aa35.91■■■■□ 3.34
VEGFA-211ENST00000476772 SRGAP3O43295 1099 aa35.91■■■■□ 3.34
VEGFA-211ENST00000476772 LNPKQ9C0E8 428 aa35.91■■■■□ 3.34
VEGFA-211ENST00000476772 LRRC4BQ9NT99 713 aa35.91■■■■□ 3.34
VEGFA-211ENST00000476772 CAMTA2O94983 1202 aa35.9■■■■□ 3.34
VEGFA-211ENST00000476772 BCORQ6W2J9 1755 aa35.9■■■■□ 3.34
VEGFA-211ENST00000476772 PDE4AP27815 886 aa35.89■■■■□ 3.34
VEGFA-211ENST00000476772 GPTP24298 496 aa35.88■■■■□ 3.33
VEGFA-211ENST00000476772 EPHA10Q5JZY3 1008 aa35.88■■■■□ 3.33
VEGFA-211ENST00000476772 RPS6KA4O75676 772 aa35.88■■■■□ 3.33
VEGFA-211ENST00000476772 GNPATO15228 680 aa35.87■■■■□ 3.33
VEGFA-211ENST00000476772 EXOC6BQ9Y2D4 811 aa35.87■■■■□ 3.33
VEGFA-211ENST00000476772 RTL5Q5HYW3 569 aaPredicted RBP35.86■■■■□ 3.33
VEGFA-211ENST00000476772 NLRP10Q86W26 655 aa35.86■■■■□ 3.33
VEGFA-211ENST00000476772 SLC27A3Q5K4L6 730 aa35.85■■■■□ 3.33
VEGFA-211ENST00000476772 SMIM5Q71RC9 77 aa35.85■■■■□ 3.33
VEGFA-211ENST00000476772 APBB1O00213 710 aa35.84■■■■□ 3.33
VEGFA-211ENST00000476772 ZNF34Q8IZ26 560 aa35.84■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms