RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 TAF1DQ9H5J8 278 aaPredicted RBP22.27■■□□□ 1.16
APOBEC3F-203ENST00000476513 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.16
APOBEC3F-203ENST00000476513 SLX4Q8IY92 1834 aa22.27■■□□□ 1.15
APOBEC3F-203ENST00000476513 C7orf43Q8WVR3 580 aa22.26■■□□□ 1.15
APOBEC3F-203ENST00000476513 CTCFP49711 727 aaPredicted RBP22.25■■□□□ 1.15
APOBEC3F-203ENST00000476513 VEGFBP49765 207 aa22.25■■□□□ 1.15
APOBEC3F-203ENST00000476513 ITGBL1O95965 494 aaPredicted RBP22.24■■□□□ 1.15
APOBEC3F-203ENST00000476513 NPM2Q86SE8 214 aaKnown RBP22.24■■□□□ 1.15
APOBEC3F-203ENST00000476513 AIDAQ96BJ3 306 aa22.24■■□□□ 1.15
APOBEC3F-203ENST00000476513 FMNL2Q96PY5 1086 aa22.24■■□□□ 1.15
APOBEC3F-203ENST00000476513 TMEM88BA6NKF7 163 aa22.23■■□□□ 1.15
APOBEC3F-203ENST00000476513 GNAT3A8MTJ3 354 aa22.23■■□□□ 1.15
APOBEC3F-203ENST00000476513 DZIP3Q86Y13 1208 aaKnown RBP22.23■■□□□ 1.15
APOBEC3F-203ENST00000476513 CCDC93Q567U6 631 aa22.22■■□□□ 1.15
APOBEC3F-203ENST00000476513 EAPPQ56P03 285 aaPredicted RBP22.22■■□□□ 1.15
APOBEC3F-203ENST00000476513 ZNF541Q9H0D2 1346 aa22.22■■□□□ 1.15
APOBEC3F-203ENST00000476513 GAS2L2Q8NHY3 880 aa22.21■■□□□ 1.15
APOBEC3F-203ENST00000476513 WBP1LQ9NX94 342 aa22.21■■□□□ 1.15
APOBEC3F-203ENST00000476513 KCNQ3O43525 872 aa22.2■■□□□ 1.14
APOBEC3F-203ENST00000476513 FKBP4Q02790 459 aaKnown RBP eCLIP22.2■■□□□ 1.14
APOBEC3F-203ENST00000476513 ZNF277Q9NRM2 450 aaPredicted RBP22.2■■□□□ 1.14
APOBEC3F-203ENST00000476513 NPR1P16066 1061 aa22.19■■□□□ 1.14
APOBEC3F-203ENST00000476513 NBPF5PQ86XG9 351 aaPredicted RBP22.19■■□□□ 1.14
APOBEC3F-203ENST00000476513 HACL1Q9UJ83 578 aa22.19■■□□□ 1.14
APOBEC3F-203ENST00000476513 ARFGEF2Q9Y6D5 1785 aa22.19■■□□□ 1.14
APOBEC3F-203ENST00000476513 SCN4AP35499 1836 aa22.19■■□□□ 1.14
APOBEC3F-203ENST00000476513 CACNA1SQ13698 1873 aa22.18■■□□□ 1.14
APOBEC3F-203ENST00000476513 CEMIPQ8WUJ3 1361 aa22.18■■□□□ 1.14
APOBEC3F-203ENST00000476513 U2SURPO15042 1029 aaKnown RBP22.18■■□□□ 1.14
APOBEC3F-203ENST00000476513 PIP4K2AP48426 406 aaPredicted RBP22.18■■□□□ 1.14
APOBEC3F-203ENST00000476513 LBX1P52954 281 aa22.18■■□□□ 1.14
APOBEC3F-203ENST00000476513 CC2D1BQ5T0F9 858 aaKnown RBP22.18■■□□□ 1.14
APOBEC3F-203ENST00000476513 PCGF6Q9BYE7 350 aa22.18■■□□□ 1.14
APOBEC3F-203ENST00000476513 CLEC11AQ9Y240 323 aa22.18■■□□□ 1.14
APOBEC3F-203ENST00000476513 USP16Q9Y5T5 823 aa22.18■■□□□ 1.14
APOBEC3F-203ENST00000476513 SIPA1L3O60292 1781 aaPredicted RBP22.17■■□□□ 1.14
APOBEC3F-203ENST00000476513 KLRG2A4D1S0 409 aaPredicted RBP22.17■■□□□ 1.14
APOBEC3F-203ENST00000476513 PER1O15534 1290 aaPredicted RBP22.17■■□□□ 1.14
APOBEC3F-203ENST00000476513 EPHX2P34913 555 aa22.17■■□□□ 1.14
APOBEC3F-203ENST00000476513 OLFM4Q6UX06 510 aa22.17■■□□□ 1.14
APOBEC3F-203ENST00000476513 CLEC4GQ6UXB4 293 aa22.17■■□□□ 1.14
APOBEC3F-203ENST00000476513 COL3A1P02461 1466 aaPredicted RBP22.16■■□□□ 1.14
APOBEC3F-203ENST00000476513 BTBD11A6QL63 1104 aa22.16■■□□□ 1.14
APOBEC3F-203ENST00000476513 BCORQ6W2J9 1755 aa22.16■■□□□ 1.14
APOBEC3F-203ENST00000476513 KIF7Q2M1P5 1343 aa22.15■■□□□ 1.14
APOBEC3F-203ENST00000476513 RASSF10A6NK89 507 aa22.15■■□□□ 1.14
APOBEC3F-203ENST00000476513 RTKN2Q8IZC4 609 aa22.15■■□□□ 1.14
APOBEC3F-203ENST00000476513 RNF123Q5XPI4 1314 aa22.14■■□□□ 1.14
APOBEC3F-203ENST00000476513 PRAMEF22A3QJZ6 481 aa22.14■■□□□ 1.13
APOBEC3F-203ENST00000476513 DEFB115Q30KQ5 88 aa22.14■■□□□ 1.13
APOBEC3F-203ENST00000476513 MAP1SQ66K74 1059 aaPredicted RBP22.14■■□□□ 1.13
APOBEC3F-203ENST00000476513 PNMA8AQ86V59 439 aaPredicted RBP22.14■■□□□ 1.13
APOBEC3F-203ENST00000476513 CNTROBQ8N137 903 aa22.14■■□□□ 1.13
APOBEC3F-203ENST00000476513 ZNF652Q9Y2D9 606 aa22.14■■□□□ 1.13
APOBEC3F-203ENST00000476513 ADAMTSL1Q8N6G6 1762 aa22.14■■□□□ 1.13
APOBEC3F-203ENST00000476513 FZD9O00144 591 aa22.13■■□□□ 1.13
APOBEC3F-203ENST00000476513 HSPA8P11142 646 aaKnown RBP22.13■■□□□ 1.13
APOBEC3F-203ENST00000476513 TPTE2Q6XPS3 522 aa22.13■■□□□ 1.13
APOBEC3F-203ENST00000476513 IARSP41252 1262 aaKnown RBP22.12■■□□□ 1.13
APOBEC3F-203ENST00000476513 PHACTR3Q96KR7 559 aa22.12■■□□□ 1.13
APOBEC3F-203ENST00000476513 NIP7Q9Y221 180 aaKnown RBP eCLIP22.12■■□□□ 1.13
APOBEC3F-203ENST00000476513 SYNE4Q8N205 404 aa22.11■■□□□ 1.13
APOBEC3F-203ENST00000476513 ABHD8Q96I13 439 aa22.11■■□□□ 1.13
APOBEC3F-203ENST00000476513 WDR33Q9C0J8 1336 aaKnown RBP22.1■■□□□ 1.13
APOBEC3F-203ENST00000476513 FAM177BA6PVY3 158 aa22.1■■□□□ 1.13
APOBEC3F-203ENST00000476513 SNRPA1P09661 255 aaKnown RBP22.1■■□□□ 1.13
APOBEC3F-203ENST00000476513 GPC2Q8N158 579 aa22.1■■□□□ 1.13
APOBEC3F-203ENST00000476513 NBPF26B4DH59 902 aa22.09■■□□□ 1.13
APOBEC3F-203ENST00000476513 RGL2O15211 777 aa22.09■■□□□ 1.13
APOBEC3F-203ENST00000476513 MAP2K1Q02750 393 aaPredicted RBP22.09■■□□□ 1.13
APOBEC3F-203ENST00000476513 NBPF10Q6P3W6 841 aaKnown RBP22.09■■□□□ 1.13
APOBEC3F-203ENST00000476513 NBPF15Q8N660 670 aa22.09■■□□□ 1.13
APOBEC3F-203ENST00000476513 ABT1Q9ULW3 272 aaKnown RBP22.09■■□□□ 1.13
APOBEC3F-203ENST00000476513 SLC34A2O95436 690 aa22.08■■□□□ 1.13
APOBEC3F-203ENST00000476513 ALDH1B1P30837 517 aa22.08■■□□□ 1.13
APOBEC3F-203ENST00000476513 PRKAR2BP31323 418 aa22.08■■□□□ 1.13
APOBEC3F-203ENST00000476513 CNGB1Q14028 1251 aaPredicted RBP22.07■■□□□ 1.12
APOBEC3F-203ENST00000476513 SNED1Q8TER0 1413 aa22.06■■□□□ 1.12
APOBEC3F-203ENST00000476513 FAM161AQ3B820 660 aa22.06■■□□□ 1.12
APOBEC3F-203ENST00000476513 JDP2Q8WYK2 163 aa22.06■■□□□ 1.12
APOBEC3F-203ENST00000476513 PSMD1Q99460 953 aa22.06■■□□□ 1.12
APOBEC3F-203ENST00000476513 DDX21Q9NR30 783 aaKnown RBP eCLIP22.06■■□□□ 1.12
APOBEC3F-203ENST00000476513 NPC1L1Q9UHC9 1359 aa22.05■■□□□ 1.12
APOBEC3F-203ENST00000476513 HLFQ16534 295 aa22.05■■□□□ 1.12
APOBEC3F-203ENST00000476513 RSPH6AQ9H0K4 717 aa22.05■■□□□ 1.12
APOBEC3F-203ENST00000476513 GTF2E1P29083 439 aaPredicted RBP22.04■■□□□ 1.12
APOBEC3F-203ENST00000476513 FMR1Q06787 632 aaKnown RBP eCLIP22.04■■□□□ 1.12
APOBEC3F-203ENST00000476513 MCM10Q7L590 875 aa22.04■■□□□ 1.12
APOBEC3F-203ENST00000476513 GJA3Q9Y6H8 435 aa22.04■■□□□ 1.12
APOBEC3F-203ENST00000476513 EIF6P56537 245 aaKnown RBP22.03■■□□□ 1.12
APOBEC3F-203ENST00000476513 CRY2Q49AN0 593 aa22.03■■□□□ 1.12
APOBEC3F-203ENST00000476513 COL4A5P29400 1685 aa22.02■■□□□ 1.12
APOBEC3F-203ENST00000476513 RTF1Q92541 710 aaKnown RBP22.02■■□□□ 1.12
APOBEC3F-203ENST00000476513 CAPNS2Q96L46 248 aa22.02■■□□□ 1.12
APOBEC3F-203ENST00000476513 ABCC12Q96J65 1359 aa22.01■■□□□ 1.11
APOBEC3F-203ENST00000476513 LMOD1P29536 600 aaPredicted RBP22.01■■□□□ 1.11
APOBEC3F-203ENST00000476513 EPS15P42566 896 aa22.01■■□□□ 1.11
APOBEC3F-203ENST00000476513 CC2D2BQ6DHV5 1058 aa22.01■■□□□ 1.11
APOBEC3F-203ENST00000476513 SCNN1DP51172 638 aa22■■□□□ 1.11
APOBEC3F-203ENST00000476513 PAXIP1Q6ZW49 1069 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms