RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 EDEM1Q92611 657 aa6.39□□□□□ -1.39
VPS13D-207ENST00000476169 HPS1Q92902 700 aa6.39□□□□□ -1.39
VPS13D-207ENST00000476169 INSM2Q96T92 566 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-207ENST00000476169 FAM129BQ96TA1 746 aa6.39□□□□□ -1.39
VPS13D-207ENST00000476169 POLMQ9NP87 494 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-207ENST00000476169 POLIQ9UNA4 740 aa6.39□□□□□ -1.39
VPS13D-207ENST00000476169 GPR182O15218 404 aa6.38□□□□□ -1.39
VPS13D-207ENST00000476169 UPP2O95045 317 aa6.38□□□□□ -1.39
VPS13D-207ENST00000476169 TCF3P15923 654 aa6.38□□□□□ -1.39
VPS13D-207ENST00000476169 USP5P45974 858 aa6.38□□□□□ -1.39
VPS13D-207ENST00000476169 RNF144AP50876 292 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-207ENST00000476169 EHHADHQ08426 723 aa6.38□□□□□ -1.39
VPS13D-207ENST00000476169 DSC3Q14574 896 aa6.38□□□□□ -1.39
VPS13D-207ENST00000476169 NBPF1Q3BBV0 1214 aa6.38□□□□□ -1.39
VPS13D-207ENST00000476169 C4orf17Q53FE4 359 aa6.38□□□□□ -1.39
VPS13D-207ENST00000476169 RHPN1Q8TCX5 695 aa6.38□□□□□ -1.39
VPS13D-207ENST00000476169 SPINT1O43278 529 aa6.37□□□□□ -1.39
VPS13D-207ENST00000476169 PDGFAP04085 211 aa6.37□□□□□ -1.39
VPS13D-207ENST00000476169 LDHBP07195 334 aaKnown RBP6.37□□□□□ -1.39
VPS13D-207ENST00000476169 PCSK2P16519 638 aa6.37□□□□□ -1.39
VPS13D-207ENST00000476169 FGD1P98174 961 aa6.37□□□□□ -1.39
VPS13D-207ENST00000476169 ATP2B2Q01814 1243 aa6.37□□□□□ -1.39
VPS13D-207ENST00000476169 HIF1AQ16665 826 aa6.37□□□□□ -1.39
VPS13D-207ENST00000476169 TREML1Q86YW5 311 aa6.37□□□□□ -1.39
VPS13D-207ENST00000476169 FAM177A1Q8N128 213 aaPredicted RBP6.37□□□□□ -1.39
VPS13D-207ENST00000476169 GJD3Q8N144 294 aa6.37□□□□□ -1.39
VPS13D-207ENST00000476169 LINC00528Q8N1L1 170 aa6.37□□□□□ -1.39
VPS13D-207ENST00000476169 AIDAQ96BJ3 306 aa6.37□□□□□ -1.39
VPS13D-207ENST00000476169 CAPN5O15484 640 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-207ENST00000476169 PRPF40AO75400 957 aaKnown RBP6.36□□□□□ -1.39
VPS13D-207ENST00000476169 IGHA2P01877 340 aa6.36□□□□□ -1.39
VPS13D-207ENST00000476169 TATP17735 454 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-207ENST00000476169 PHKA2P46019 1235 aa6.36□□□□□ -1.39
VPS13D-207ENST00000476169 PRR20EP86478 221 aa6.36□□□□□ -1.39
VPS13D-207ENST00000476169 PRR20CP86479 221 aa6.36□□□□□ -1.39
VPS13D-207ENST00000476169 PRR20DP86480 221 aa6.36□□□□□ -1.39
VPS13D-207ENST00000476169 PRR20BP86481 221 aa6.36□□□□□ -1.39
VPS13D-207ENST00000476169 PRR20AP86496 221 aa6.36□□□□□ -1.39
VPS13D-207ENST00000476169 GPR152Q8TDT2 470 aa6.36□□□□□ -1.39
VPS13D-207ENST00000476169 ALKBH8Q96BT7 664 aaKnown RBP6.36□□□□□ -1.39
VPS13D-207ENST00000476169 NIF3L1Q9GZT8 377 aa6.36□□□□□ -1.39
VPS13D-207ENST00000476169 FAM13BQ9NYF5 915 aa6.36□□□□□ -1.39
VPS13D-207ENST00000476169 SPATA31C2B4DYI2 1134 aa6.35□□□□□ -1.39
VPS13D-207ENST00000476169 CTSOP43234 321 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-207ENST00000476169 XPCQ01831 940 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-207ENST00000476169 TSNAXIP1Q2TAA8 658 aa6.35□□□□□ -1.39
VPS13D-207ENST00000476169 TRIM67Q6ZTA4 783 aa6.35□□□□□ -1.39
VPS13D-207ENST00000476169 TTC16Q8NEE8 873 aa6.35□□□□□ -1.39
VPS13D-207ENST00000476169 DUSP9Q99956 384 aaKnown RBP6.35□□□□□ -1.39
VPS13D-207ENST00000476169 ZDHHC3Q9NYG2 299 aa6.35□□□□□ -1.39
VPS13D-207ENST00000476169 BCS1LQ9Y276 419 aa6.35□□□□□ -1.39
VPS13D-207ENST00000476169 PNMA6FA0A0J9YX94 578 aa6.34□□□□□ -1.39
VPS13D-207ENST00000476169 TGFBR3LH3BV60 316 aa6.34□□□□□ -1.39
VPS13D-207ENST00000476169 MICAL2O94851 1124 aa6.34□□□□□ -1.39
VPS13D-207ENST00000476169 RECKO95980 971 aa6.34□□□□□ -1.39
VPS13D-207ENST00000476169 BMP2P12643 396 aa6.34□□□□□ -1.39
VPS13D-207ENST00000476169 C8orf34Q49A92 452 aa6.34□□□□□ -1.39
VPS13D-207ENST00000476169 C6orf118Q5T5N4 469 aa6.34□□□□□ -1.39
VPS13D-207ENST00000476169 NBPF10Q6P3W6 841 aaKnown RBP6.34□□□□□ -1.39
VPS13D-207ENST00000476169 BICDL1Q6ZP65 573 aa6.34□□□□□ -1.39
VPS13D-207ENST00000476169 NUDT16Q96DE0 195 aaKnown RBP6.34□□□□□ -1.39
VPS13D-207ENST00000476169 MRS2Q9HD23 443 aa6.34□□□□□ -1.39
VPS13D-207ENST00000476169 PARP2Q9UGN5 583 aa6.34□□□□□ -1.39
VPS13D-207ENST00000476169 WWC3Q9ULE0 1092 aa6.34□□□□□ -1.39
VPS13D-207ENST00000476169 GPC6Q9Y625 555 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-207ENST00000476169 RPLP1P05386 114 aaKnown RBP6.33□□□□□ -1.4
VPS13D-207ENST00000476169 ITGAEP38570 1179 aa6.33□□□□□ -1.4
VPS13D-207ENST00000476169 POU4F2Q12837 409 aa6.33□□□□□ -1.4
VPS13D-207ENST00000476169 MRPL58Q14197 206 aaKnown RBP6.33□□□□□ -1.4
VPS13D-207ENST00000476169 ENOX2Q16206 610 aaKnown RBP6.33□□□□□ -1.4
VPS13D-207ENST00000476169 PRICKLE2Q7Z3G6 844 aa6.33□□□□□ -1.4
VPS13D-207ENST00000476169 RNF217Q8TC41 542 aa6.33□□□□□ -1.4
VPS13D-207ENST00000476169 PIK3R5Q8WYR1 880 aa6.33□□□□□ -1.4
VPS13D-207ENST00000476169 HSH2DQ96JZ2 352 aa6.33□□□□□ -1.4
VPS13D-207ENST00000476169 SUSD3Q96L08 255 aa6.33□□□□□ -1.4
VPS13D-207ENST00000476169 NEUROD4Q9HD90 331 aa6.33□□□□□ -1.4
VPS13D-207ENST00000476169 NEFLP07196 543 aa6.32□□□□□ -1.4
VPS13D-207ENST00000476169 IDH3AP50213 366 aa6.32□□□□□ -1.4
VPS13D-207ENST00000476169 PSMD2Q13200 908 aa6.32□□□□□ -1.4
VPS13D-207ENST00000476169 IER5Q5VY09 327 aa6.32□□□□□ -1.4
VPS13D-207ENST00000476169 ALG1LQ6GMV1 187 aa6.32□□□□□ -1.4
VPS13D-207ENST00000476169 LYSMD3Q7Z3D4 306 aa6.32□□□□□ -1.4
VPS13D-207ENST00000476169 ZNF280CQ8ND82 737 aa6.32□□□□□ -1.4
VPS13D-207ENST00000476169 C7orf43Q8WVR3 580 aa6.32□□□□□ -1.4
VPS13D-207ENST00000476169 FAM161BQ96MY7 647 aa6.32□□□□□ -1.4
VPS13D-207ENST00000476169 SETDB2Q96T68 719 aa6.32□□□□□ -1.4
VPS13D-207ENST00000476169 GGNBP2Q9H3C7 697 aa6.32□□□□□ -1.4
VPS13D-207ENST00000476169 ANKIB1Q9P2G1 1089 aa6.32□□□□□ -1.4
VPS13D-207ENST00000476169 ATP4AP20648 1035 aa6.31□□□□□ -1.4
VPS13D-207ENST00000476169 ORC1Q13415 861 aa6.31□□□□□ -1.4
VPS13D-207ENST00000476169 ARSJQ5FYB0 599 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-207ENST00000476169 WDR44Q5JSH3 913 aa6.31□□□□□ -1.4
VPS13D-207ENST00000476169 MRPL14Q6P1L8 145 aaKnown RBP6.31□□□□□ -1.4
VPS13D-207ENST00000476169 KLRG1Q96E93 195 aa6.31□□□□□ -1.4
VPS13D-207ENST00000476169 DRC1Q96MC2 740 aa6.31□□□□□ -1.4
VPS13D-207ENST00000476169 CSRNP1Q96S65 589 aa6.31□□□□□ -1.4
VPS13D-207ENST00000476169 BACH2Q9BYV9 841 aa6.31□□□□□ -1.4
VPS13D-207ENST00000476169 PPP1R1BQ9UD71 204 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-207ENST00000476169 VTI1BQ9UEU0 232 aa6.31□□□□□ -1.4
VPS13D-207ENST00000476169 A0A1B0GTH6 734 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms