RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 GBP4Q96PP9 640 aa20.26■□□□□ 0.83
TVP23B-202ENST00000476139 SLAIN2Q9P270 581 aa20.26■□□□□ 0.83
TVP23B-202ENST00000476139 FSD2A1L4K1 749 aa20.26■□□□□ 0.83
TVP23B-202ENST00000476139 NEURL1BA8MQ27 555 aa20.26■□□□□ 0.83
TVP23B-202ENST00000476139 ANKRD13DQ6ZTN6 518 aa20.26■□□□□ 0.83
TVP23B-202ENST00000476139 TOM1L2Q6ZVM7 507 aa20.26■□□□□ 0.83
TVP23B-202ENST00000476139 SIL1Q9H173 461 aa20.26■□□□□ 0.83
TVP23B-202ENST00000476139 ZNF335Q9H4Z2 1342 aaPredicted RBP20.26■□□□□ 0.83
TVP23B-202ENST00000476139 NOL8Q76FK4 1167 aaKnown RBP20.25■□□□□ 0.83
TVP23B-202ENST00000476139 UTYO14607 1347 aa20.25■□□□□ 0.83
TVP23B-202ENST00000476139 EPHA10Q5JZY3 1008 aa20.25■□□□□ 0.83
TVP23B-202ENST00000476139 UPF3BQ9BZI7 483 aaKnown RBP20.25■□□□□ 0.83
TVP23B-202ENST00000476139 CPDO75976 1380 aa20.25■□□□□ 0.83
TVP23B-202ENST00000476139 SCN11AQ9UI33 1791 aa20.25■□□□□ 0.83
TVP23B-202ENST00000476139 SASH1O94885 1247 aa20.25■□□□□ 0.83
TVP23B-202ENST00000476139 GCKRQ14397 625 aa20.25■□□□□ 0.83
TVP23B-202ENST00000476139 CWC27Q6UX04 472 aaKnown RBP20.25■□□□□ 0.83
TVP23B-202ENST00000476139 LMTK3Q96Q04 1460 aa20.24■□□□□ 0.83
TVP23B-202ENST00000476139 CRYBG1Q9Y4K1 1723 aa20.24■□□□□ 0.83
TVP23B-202ENST00000476139 NEXNQ0ZGT2 675 aa20.24■□□□□ 0.83
TVP23B-202ENST00000476139 FMNL2Q96PY5 1086 aa20.24■□□□□ 0.83
TVP23B-202ENST00000476139 RRAGDQ9NQL2 400 aaPredicted RBP20.24■□□□□ 0.83
TVP23B-202ENST00000476139 CNTROBQ8N137 903 aa20.24■□□□□ 0.83
TVP23B-202ENST00000476139 METTL22Q9BUU2 404 aaPredicted RBP20.24■□□□□ 0.83
TVP23B-202ENST00000476139 AACSQ86V21 672 aa20.23■□□□□ 0.83
TVP23B-202ENST00000476139 C5P01031 1676 aa20.23■□□□□ 0.83
TVP23B-202ENST00000476139 MCCP23508 829 aa20.23■□□□□ 0.83
TVP23B-202ENST00000476139 TMX3Q96JJ7 454 aa20.23■□□□□ 0.83
TVP23B-202ENST00000476139 ATP5J2-PTCD1G3V325 749 aa20.22■□□□□ 0.83
TVP23B-202ENST00000476139 PTCD1O75127 700 aaKnown RBP20.22■□□□□ 0.83
TVP23B-202ENST00000476139 IFIT2P09913 472 aaKnown RBP20.22■□□□□ 0.83
TVP23B-202ENST00000476139 SGSM2O43147 1006 aa20.22■□□□□ 0.83
TVP23B-202ENST00000476139 GAS2L3Q86XJ1 694 aa20.22■□□□□ 0.83
TVP23B-202ENST00000476139 EAF2Q96CJ1 260 aaPredicted RBP20.22■□□□□ 0.83
TVP23B-202ENST00000476139 CCDC8Q9H0W5 538 aaPredicted RBP20.22■□□□□ 0.83
TVP23B-202ENST00000476139 HDAC5Q9UQL6 1122 aa20.22■□□□□ 0.83
TVP23B-202ENST00000476139 GLRX3O76003 335 aaKnown RBP20.22■□□□□ 0.83
TVP23B-202ENST00000476139 FAM43AQ8N2R8 423 aa20.22■□□□□ 0.83
TVP23B-202ENST00000476139 ECHDC1Q9NTX5 307 aa20.22■□□□□ 0.83
TVP23B-202ENST00000476139 TTC41PQ6P2S7 1318 aa20.21■□□□□ 0.83
TVP23B-202ENST00000476139 WDR17Q8IZU2 1322 aa20.21■□□□□ 0.83
TVP23B-202ENST00000476139 BAG4O95429 457 aaKnown RBP20.21■□□□□ 0.83
TVP23B-202ENST00000476139 G3BP1Q13283 466 aaKnown RBP eCLIP20.21■□□□□ 0.83
TVP23B-202ENST00000476139 ZCRB1Q8TBF4 217 aaKnown RBP20.21■□□□□ 0.83
TVP23B-202ENST00000476139 DDX54Q8TDD1 881 aaKnown RBP20.21■□□□□ 0.83
TVP23B-202ENST00000476139 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
TVP23B-202ENST00000476139 STRN4Q9NRL3 753 aa20.2■□□□□ 0.82
TVP23B-202ENST00000476139 TLR7Q9NYK1 1049 aaKnown RBP20.2■□□□□ 0.82
TVP23B-202ENST00000476139 HSPA4P34932 840 aa20.2■□□□□ 0.82
TVP23B-202ENST00000476139 ANAPC15P60006 121 aa20.2■□□□□ 0.82
TVP23B-202ENST00000476139 CHAMP1Q96JM3 812 aa20.2■□□□□ 0.82
TVP23B-202ENST00000476139 SOS2Q07890 1332 aaPredicted RBP20.2■□□□□ 0.82
TVP23B-202ENST00000476139 ERC1Q8IUD2 1116 aa20.19■□□□□ 0.82
TVP23B-202ENST00000476139 XIRP1Q702N8 1843 aaKnown RBP20.19■□□□□ 0.82
TVP23B-202ENST00000476139 CYP2E1P05181 493 aaPredicted RBP20.19■□□□□ 0.82
TVP23B-202ENST00000476139 FOXD4L5Q5VV16 416 aaPredicted RBP20.19■□□□□ 0.82
TVP23B-202ENST00000476139 FOXD4L4Q8WXT5 416 aaPredicted RBP20.19■□□□□ 0.82
TVP23B-202ENST00000476139 GRPEL1Q9HAV7 217 aa20.19■□□□□ 0.82
TVP23B-202ENST00000476139 ZDHHC9Q9Y397 364 aa20.19■□□□□ 0.82
TVP23B-202ENST00000476139 CWC22Q9HCG8 908 aaKnown RBP20.19■□□□□ 0.82
TVP23B-202ENST00000476139 NUCB2P80303 420 aa20.18■□□□□ 0.82
TVP23B-202ENST00000476139 UBE3BQ7Z3V4 1068 aa20.18■□□□□ 0.82
TVP23B-202ENST00000476139 LSG1Q9H089 658 aaKnown RBP20.18■□□□□ 0.82
TVP23B-202ENST00000476139 KDM4FA0A1W2PPD8 638 aa20.18■□□□□ 0.82
TVP23B-202ENST00000476139 NBPF26B4DH59 902 aa20.18■□□□□ 0.82
TVP23B-202ENST00000476139 NBPF14Q5TI25 921 aa20.18■□□□□ 0.82
TVP23B-202ENST00000476139 NBPF10Q6P3W6 841 aaKnown RBP20.18■□□□□ 0.82
TVP23B-202ENST00000476139 NBPF15Q8N660 670 aa20.18■□□□□ 0.82
TVP23B-202ENST00000476139 CLEC17AQ6ZS10 378 aa20.17■□□□□ 0.82
TVP23B-202ENST00000476139 RASEFQ8IZ41 740 aa20.17■□□□□ 0.82
TVP23B-202ENST00000476139 NCLP19338 710 aaKnown RBP20.17■□□□□ 0.82
TVP23B-202ENST00000476139 MCTP1Q6DN14 999 aa20.17■□□□□ 0.82
TVP23B-202ENST00000476139 RAD50Q92878 1312 aa20.16■□□□□ 0.82
TVP23B-202ENST00000476139 MRC1P22897 1456 aa20.16■□□□□ 0.82
TVP23B-202ENST00000476139 MRE11P49959 708 aa20.16■□□□□ 0.82
TVP23B-202ENST00000476139 DIAPH3Q9NSV4 1193 aa20.16■□□□□ 0.82
TVP23B-202ENST00000476139 A0A087WZG4 1122 aa20.16■□□□□ 0.82
TVP23B-202ENST00000476139 A1BGP04217 495 aa20.15■□□□□ 0.82
TVP23B-202ENST00000476139 LARP6Q9BRS8 491 aaKnown RBP20.15■□□□□ 0.82
TVP23B-202ENST00000476139 SNX14Q9Y5W7 946 aa20.15■□□□□ 0.82
TVP23B-202ENST00000476139 PCDH11XQ9BZA7 1347 aa20.15■□□□□ 0.82
TVP23B-202ENST00000476139 PCDH11YQ9BZA8 1340 aa20.15■□□□□ 0.82
TVP23B-202ENST00000476139 PTH1RQ03431 593 aa20.15■□□□□ 0.82
TVP23B-202ENST00000476139 GPATCH3Q96I76 525 aa20.15■□□□□ 0.82
TVP23B-202ENST00000476139 BOLA2Q9H3K6 86 aa20.15■□□□□ 0.82
TVP23B-202ENST00000476139 DDX49Q9Y6V7 483 aaKnown RBP20.15■□□□□ 0.82
TVP23B-202ENST00000476139 TTLL7Q6ZT98 887 aa20.14■□□□□ 0.82
TVP23B-202ENST00000476139 KIAA1211Q6ZU35 1233 aa20.14■□□□□ 0.82
TVP23B-202ENST00000476139 IL2RBP14784 551 aa20.14■□□□□ 0.81
TVP23B-202ENST00000476139 EVA1CP58658 441 aa20.14■□□□□ 0.81
TVP23B-202ENST00000476139 IL17RAQ96F46 866 aa20.14■□□□□ 0.81
TVP23B-202ENST00000476139 MCM2P49736 904 aa20.13■□□□□ 0.81
TVP23B-202ENST00000476139 COL5A2P05997 1499 aaPredicted RBP20.13■□□□□ 0.81
TVP23B-202ENST00000476139 PLBD2Q8NHP8 589 aa20.13■□□□□ 0.81
TVP23B-202ENST00000476139 PKD1L3Q7Z443 1732 aa20.13■□□□□ 0.81
TVP23B-202ENST00000476139 ABCC6O95255 1503 aa20.13■□□□□ 0.81
TVP23B-202ENST00000476139 CPA1P15085 419 aa20.13■□□□□ 0.81
TVP23B-202ENST00000476139 PTPN12Q05209 780 aaKnown RBP20.13■□□□□ 0.81
TVP23B-202ENST00000476139 EVI5LQ96CN4 794 aa20.13■□□□□ 0.81
TVP23B-202ENST00000476139 FAM227BQ96M60 508 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms