RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
PTPN7-208ENST00000476061 APLP1P51693 650 aa13.12□□□□□ -0.31
PTPN7-208ENST00000476061 RASSF7Q02833 373 aa13.12□□□□□ -0.31
PTPN7-208ENST00000476061 NFE2L2Q16236 605 aa13.12□□□□□ -0.31
PTPN7-208ENST00000476061 STYK1Q6J9G0 422 aa13.12□□□□□ -0.31
PTPN7-208ENST00000476061 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
PTPN7-208ENST00000476061 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
PTPN7-208ENST00000476061 CNKSR1Q969H4 720 aa13.12□□□□□ -0.31
PTPN7-208ENST00000476061 GLTPD2A6NH11 291 aa13.11□□□□□ -0.31
PTPN7-208ENST00000476061 NFKBIEO00221 500 aa13.11□□□□□ -0.31
PTPN7-208ENST00000476061 SRGNP10124 158 aa13.11□□□□□ -0.31
PTPN7-208ENST00000476061 PRELPP51888 382 aa13.11□□□□□ -0.31
PTPN7-208ENST00000476061 FSTL1Q12841 308 aa13.11□□□□□ -0.31
PTPN7-208ENST00000476061 C16orf71Q8IYS4 520 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-208ENST00000476061 ZNF622Q969S3 477 aaKnown RBP eCLIP13.11□□□□□ -0.311e-6■□□□□ 10.3
PTPN7-208ENST00000476061 MASTLQ96GX5 879 aa13.11□□□□□ -0.31
PTPN7-208ENST00000476061 LTBP3Q9NS15 1303 aa13.11□□□□□ -0.31
PTPN7-208ENST00000476061 MAPK8IP3Q9UPT6 1336 aa13.11□□□□□ -0.31
PTPN7-208ENST00000476061 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-208ENST00000476061 NPHP1O15259 732 aa13.1□□□□□ -0.31
PTPN7-208ENST00000476061 PIP4K2AP48426 406 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-208ENST00000476061 EIF4A1P60842 406 aaKnown RBP13.1□□□□□ -0.31
PTPN7-208ENST00000476061 SOGA3Q5TF21 947 aa13.1□□□□□ -0.31
PTPN7-208ENST00000476061 TPTE2Q6XPS3 522 aa13.1□□□□□ -0.31
PTPN7-208ENST00000476061 RRAGCQ9HB90 399 aa13.1□□□□□ -0.31
PTPN7-208ENST00000476061 ERVV-1B6SEH8 477 aa13.09□□□□□ -0.31
PTPN7-208ENST00000476061 NBPF5PQ86XG9 351 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-208ENST00000476061 CCDC24Q8N4L8 307 aa13.09□□□□□ -0.31
PTPN7-208ENST00000476061 MIS18AQ9NYP9 233 aa13.09□□□□□ -0.31
PTPN7-208ENST00000476061 C21orf2O43822 256 aa13.08□□□□□ -0.32
PTPN7-208ENST00000476061 VEGFAP15692 232 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-208ENST00000476061 BABAM1Q9NWV8 329 aa13.08□□□□□ -0.32
PTPN7-208ENST00000476061 NIP7Q9Y221 180 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTPN7-208ENST00000476061 ERBB4Q15303 1308 aa13.08□□□□□ -0.32
PTPN7-208ENST00000476061 NPR1P16066 1061 aa13.07□□□□□ -0.32
PTPN7-208ENST00000476061 DPY19L2Q6NUT2 758 aa13.07□□□□□ -0.32
PTPN7-208ENST00000476061 PRPF40BQ6NWY9 871 aaKnown RBP13.07□□□□□ -0.32
PTPN7-208ENST00000476061 TAOK3Q9H2K8 898 aa13.07□□□□□ -0.32
PTPN7-208ENST00000476061 RIC1Q4ADV7 1423 aa13.06□□□□□ -0.32
PTPN7-208ENST00000476061 LMOD3Q0VAK6 560 aa13.06□□□□□ -0.32
PTPN7-208ENST00000476061 HLFQ16534 295 aa13.06□□□□□ -0.32
PTPN7-208ENST00000476061 DNAJC5GQ8N7S2 189 aa13.06□□□□□ -0.32
PTPN7-208ENST00000476061 SMC1BQ8NDV3 1235 aa13.06□□□□□ -0.32
PTPN7-208ENST00000476061 C7orf43Q8WVR3 580 aa13.06□□□□□ -0.32
PTPN7-208ENST00000476061 MAP3K15Q6ZN16 1313 aa13.06□□□□□ -0.32
PTPN7-208ENST00000476061 MYBBP1AQ9BQG0 1328 aaKnown RBP13.06□□□□□ -0.32
PTPN7-208ENST00000476061 IBTKQ9P2D0 1353 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-208ENST00000476061 SCN4AP35499 1836 aa13.05□□□□□ -0.32
PTPN7-208ENST00000476061 ALDH1B1P30837 517 aa13.05□□□□□ -0.32
PTPN7-208ENST00000476061 RIPK4P57078 832 aa13.05□□□□□ -0.32
PTPN7-208ENST00000476061 ERFEQ4G0M1 354 aa13.05□□□□□ -0.32
PTPN7-208ENST00000476061 THUMPD2Q9BTF0 503 aaKnown RBP13.05□□□□□ -0.32
PTPN7-208ENST00000476061 NYXQ9GZU5 481 aa13.05□□□□□ -0.32
PTPN7-208ENST00000476061 ANKRD36CQ5JPF3 1778 aa13.04□□□□□ -0.32
PTPN7-208ENST00000476061 TMPOP42166 694 aaKnown RBP13.04□□□□□ -0.32
PTPN7-208ENST00000476061 CCDC93Q567U6 631 aa13.04□□□□□ -0.32
PTPN7-208ENST00000476061 KIF6Q6ZMV9 814 aa13.04□□□□□ -0.32
PTPN7-208ENST00000476061 POTECB2RU33 542 aa13.03□□□□□ -0.32
PTPN7-208ENST00000476061 GTF2E1P29083 439 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-208ENST00000476061 CRY2Q49AN0 593 aa13.03□□□□□ -0.32
PTPN7-208ENST00000476061 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-208ENST00000476061 TSPYL4Q9UJ04 414 aa13.03□□□□□ -0.32
PTPN7-208ENST00000476061 RRP7AQ9Y3A4 280 aaKnown RBP13.03□□□□□ -0.32
PTPN7-208ENST00000476061 ZEB1P37275 1124 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-208ENST00000476061 DDX10Q13206 875 aaKnown RBP13.02□□□□□ -0.33
PTPN7-208ENST00000476061 GIGYF2Q6Y7W6 1299 aaKnown RBP13.02□□□□□ -0.33
PTPN7-208ENST00000476061 TTLL7Q6ZT98 887 aa13.02□□□□□ -0.33
PTPN7-208ENST00000476061 ZNF34Q8IZ26 560 aa13.02□□□□□ -0.33
PTPN7-208ENST00000476061 RTKN2Q8IZC4 609 aa13.02□□□□□ -0.33
PTPN7-208ENST00000476061 NGEFQ8N5V2 710 aa13.02□□□□□ -0.33
PTPN7-208ENST00000476061 MYL6BP14649 208 aa13.01□□□□□ -0.33
PTPN7-208ENST00000476061 FKBP4Q02790 459 aaKnown RBP eCLIP13.01□□□□□ -0.33
PTPN7-208ENST00000476061 CC2D2BQ6DHV5 1058 aa13.01□□□□□ -0.33
PTPN7-208ENST00000476061 LRP10Q7Z4F1 713 aa13.01□□□□□ -0.33
PTPN7-208ENST00000476061 SNED1Q8TER0 1413 aa13□□□□□ -0.33
PTPN7-208ENST00000476061 UBN2Q6ZU65 1347 aa13□□□□□ -0.33
PTPN7-208ENST00000476061 FAM177BA6PVY3 158 aa13□□□□□ -0.33
PTPN7-208ENST00000476061 HOXA10P31260 410 aaPredicted RBP13□□□□□ -0.33
PTPN7-208ENST00000476061 PDIA6Q15084 440 aa13□□□□□ -0.33
PTPN7-208ENST00000476061 GRIPAP1Q4V328 841 aa13□□□□□ -0.33
PTPN7-208ENST00000476061 PARP10Q53GL7 1025 aa13□□□□□ -0.33
PTPN7-208ENST00000476061 RUNDC1Q96C34 613 aa13□□□□□ -0.33
PTPN7-208ENST00000476061 KLRG1Q96E93 195 aa13□□□□□ -0.33
PTPN7-208ENST00000476061 ABCC12Q96J65 1359 aa12.99□□□□□ -0.33
PTPN7-208ENST00000476061 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
PTPN7-208ENST00000476061 SUSD4Q5VX71 490 aa12.99□□□□□ -0.33
PTPN7-208ENST00000476061 PPP1R42Q7Z4L9 355 aa12.99□□□□□ -0.33
PTPN7-208ENST00000476061 JMYQ8N9B5 988 aa12.99□□□□□ -0.33
PTPN7-208ENST00000476061 ZBTB3Q9H5J0 574 aa12.99□□□□□ -0.33
PTPN7-208ENST00000476061 LAMB2P55268 1798 aa12.99□□□□□ -0.33
PTPN7-208ENST00000476061 IQCA1LA6NCM1 817 aa12.98□□□□□ -0.33
PTPN7-208ENST00000476061 CHL1O00533 1208 aa12.98□□□□□ -0.33
PTPN7-208ENST00000476061 DDNO94850 711 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-208ENST00000476061 NTSR2O95665 410 aa12.98□□□□□ -0.33
PTPN7-208ENST00000476061 WDR43Q15061 677 aaKnown RBP eCLIP12.98□□□□□ -0.33
PTPN7-208ENST00000476061 IFFO2Q5TF58 517 aa12.98□□□□□ -0.33
PTPN7-208ENST00000476061 NUTM1Q86Y26 1132 aa12.98□□□□□ -0.33
PTPN7-208ENST00000476061 L3MBTL3Q96JM7 780 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-208ENST00000476061 CRAMP1Q96RY5 1269 aa12.98□□□□□ -0.33
PTPN7-208ENST00000476061 PSMD1Q99460 953 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms