RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 C2orf72A6NCS6 295 aa14.3□□□□□ -0.12
CALD1-217ENST00000475772 PTCD1O75127 700 aaKnown RBP14.3□□□□□ -0.12
CALD1-217ENST00000475772 RFC4P35249 363 aa14.3□□□□□ -0.12
CALD1-217ENST00000475772 SULT6B1Q6IMI4 303 aa14.3□□□□□ -0.12
CALD1-217ENST00000475772 CRISPLD2Q9H0B8 497 aa14.3□□□□□ -0.12
CALD1-217ENST00000475772 TSHZ2Q9NRE2 1034 aa14.3□□□□□ -0.12
CALD1-217ENST00000475772 BCS1LQ9Y276 419 aa14.3□□□□□ -0.12
CALD1-217ENST00000475772 CRKLP46109 303 aaKnown RBP14.29□□□□□ -0.12
CALD1-217ENST00000475772 MORC1Q86VD1 984 aa14.29□□□□□ -0.12
CALD1-217ENST00000475772 SRP68Q9UHB9 627 aaKnown RBP14.29□□□□□ -0.12
CALD1-217ENST00000475772 ADAMTS7Q9UKP4 1686 aa14.29□□□□□ -0.12
CALD1-217ENST00000475772 TJP1Q07157 1748 aa14.29□□□□□ -0.12
CALD1-217ENST00000475772 VIRMAQ69YN4 1812 aaKnown RBP14.29□□□□□ -0.12
CALD1-217ENST00000475772 IFFO2Q5TF58 517 aa14.28□□□□□ -0.12
CALD1-217ENST00000475772 INTS5Q6P9B9 1019 aaKnown RBP14.28□□□□□ -0.12
CALD1-217ENST00000475772 LGR6Q9HBX8 967 aa14.28□□□□□ -0.12
CALD1-217ENST00000475772 GPHNQ9NQX3 736 aaPredicted RBP14.28□□□□□ -0.12
CALD1-217ENST00000475772 CCDC87Q9NVE4 849 aa14.28□□□□□ -0.12
CALD1-217ENST00000475772 ARFGEF1Q9Y6D6 1849 aa14.27□□□□□ -0.12
CALD1-217ENST00000475772 DDR1Q08345 913 aa14.27□□□□□ -0.13
CALD1-217ENST00000475772 ARHGAP27Q6ZUM4 889 aa14.27□□□□□ -0.13
CALD1-217ENST00000475772 TMC2Q8TDI7 906 aa14.27□□□□□ -0.13
CALD1-217ENST00000475772 PARP3Q9Y6F1 533 aa14.27□□□□□ -0.13
CALD1-217ENST00000475772 USP42Q9H9J4 1324 aaKnown RBP14.26□□□□□ -0.13
CALD1-217ENST00000475772 TM4SF1P30408 202 aa14.26□□□□□ -0.13
CALD1-217ENST00000475772 C1orf141Q5JVX7 400 aa14.26□□□□□ -0.13
CALD1-217ENST00000475772 SBF1O95248 1867 aa14.26□□□□□ -0.13
CALD1-217ENST00000475772 FCHSD2O94868 740 aa14.25□□□□□ -0.13
CALD1-217ENST00000475772 PDE4AP27815 886 aa14.25□□□□□ -0.13
CALD1-217ENST00000475772 DNAJC10Q8IXB1 793 aa14.25□□□□□ -0.13
CALD1-217ENST00000475772 SLC39A6Q13433 755 aa14.24□□□□□ -0.13
CALD1-217ENST00000475772 AKAP4Q5JQC9 854 aa14.24□□□□□ -0.13
CALD1-217ENST00000475772 SLC52A2Q9HAB3 445 aa14.24□□□□□ -0.13
CALD1-217ENST00000475772 NMRK2Q9NPI5 230 aa14.24□□□□□ -0.13
CALD1-217ENST00000475772 AFDNP55196 1824 aaKnown RBP14.23□□□□□ -0.13
CALD1-217ENST00000475772 POLRMTO00411 1230 aaKnown RBP14.23□□□□□ -0.13
CALD1-217ENST00000475772 PER1O15534 1290 aaPredicted RBP14.23□□□□□ -0.13
CALD1-217ENST00000475772 RNMTO43148 476 aaKnown RBP14.23□□□□□ -0.13
CALD1-217ENST00000475772 CHRNA5P30532 468 aa14.23□□□□□ -0.13
CALD1-217ENST00000475772 DNAJC5GQ8N7S2 189 aa14.23□□□□□ -0.13
CALD1-217ENST00000475772 PIM2Q9P1W9 311 aa14.23□□□□□ -0.13
CALD1-217ENST00000475772 KNSTRNQ9Y448 316 aa14.23□□□□□ -0.13
CALD1-217ENST00000475772 TOMM70O94826 608 aa14.22□□□□□ -0.13
CALD1-217ENST00000475772 CYP19A1P11511 503 aaPredicted RBP14.22□□□□□ -0.13
CALD1-217ENST00000475772 FOXK1P85037 733 aa14.22□□□□□ -0.13
CALD1-217ENST00000475772 C9orf131Q5VYM1 1079 aa14.22□□□□□ -0.13
CALD1-217ENST00000475772 HMOX1P09601 288 aa14.21□□□□□ -0.13
CALD1-217ENST00000475772 MTHFSDQ2M296 383 aaKnown RBP14.21□□□□□ -0.13
CALD1-217ENST00000475772 USPL1Q5W0Q7 1092 aa14.21□□□□□ -0.13
CALD1-217ENST00000475772 BCL2L12Q9HB09 334 aa14.21□□□□□ -0.13
CALD1-217ENST00000475772 SOS1Q07889 1333 aaPredicted RBP14.2□□□□□ -0.14
CALD1-217ENST00000475772 KIF7Q2M1P5 1343 aa14.19□□□□□ -0.14
CALD1-217ENST00000475772 NRXN2Q9P2S2 1712 aa14.19□□□□□ -0.14
CALD1-217ENST00000475772 DSG2Q14126 1118 aa14.19□□□□□ -0.14
CALD1-217ENST00000475772 MFSD10Q14728 455 aa14.19□□□□□ -0.14
CALD1-217ENST00000475772 NFIXQ14938 502 aa14.19□□□□□ -0.14
CALD1-217ENST00000475772 DALRD3Q5D0E6 543 aaKnown RBP14.19□□□□□ -0.14
CALD1-217ENST00000475772 LARP6Q9BRS8 491 aaKnown RBP14.19□□□□□ -0.14
CALD1-217ENST00000475772 NARFQ9UHQ1 456 aa14.19□□□□□ -0.14
CALD1-217ENST00000475772 ZBTB1Q9Y2K1 713 aa14.19□□□□□ -0.14
CALD1-217ENST00000475772 KCPQ6ZWJ8 1503 aa14.19□□□□□ -0.14
CALD1-217ENST00000475772 MRC1P22897 1456 aa14.18□□□□□ -0.14
CALD1-217ENST00000475772 CCDC88AQ3V6T2 1871 aa14.18□□□□□ -0.14
CALD1-217ENST00000475772 APLP1P51693 650 aa14.18□□□□□ -0.14
CALD1-217ENST00000475772 PRELPP51888 382 aa14.18□□□□□ -0.14
CALD1-217ENST00000475772 ZPR1O75312 459 aa14.17□□□□□ -0.14
CALD1-217ENST00000475772 UBR2Q8IWV8 1755 aa14.16□□□□□ -0.14
CALD1-217ENST00000475772 COL15A1P39059 1388 aa14.15□□□□□ -0.14
CALD1-217ENST00000475772 DIAPH1O60610 1272 aaKnown RBP14.15□□□□□ -0.14
CALD1-217ENST00000475772 HTRA3P83110 453 aa14.15□□□□□ -0.14
CALD1-217ENST00000475772 CC2D1BQ5T0F9 858 aaKnown RBP14.15□□□□□ -0.14
CALD1-217ENST00000475772 VSIG10Q8N0Z9 540 aa14.15□□□□□ -0.14
CALD1-217ENST00000475772 IL17REQ8NFR9 667 aa14.15□□□□□ -0.14
CALD1-217ENST00000475772 RBM46Q8TBY0 533 aaKnown RBP14.15□□□□□ -0.14
CALD1-217ENST00000475772 CCER1Q8TC90 406 aaPredicted RBP14.15□□□□□ -0.14
CALD1-217ENST00000475772 DDX27Q96GQ7 796 aaKnown RBP14.15□□□□□ -0.14
CALD1-217ENST00000475772 RRAGCQ9HB90 399 aa14.15□□□□□ -0.14
CALD1-217ENST00000475772 RNF181Q9P0P0 153 aa14.15□□□□□ -0.14
CALD1-217ENST00000475772 PCNTO95613 3336 aa14.15□□□□□ -0.14
CALD1-217ENST00000475772 SERPINB2P05120 415 aa14.14□□□□□ -0.15
CALD1-217ENST00000475772 HOXB3P14651 431 aaPredicted RBP14.14□□□□□ -0.15
CALD1-217ENST00000475772 EIF5P55010 431 aaKnown RBP14.14□□□□□ -0.15
CALD1-217ENST00000475772 RASSF7Q02833 373 aa14.14□□□□□ -0.15
CALD1-217ENST00000475772 PPP1R15BQ5SWA1 713 aa14.14□□□□□ -0.15
CALD1-217ENST00000475772 PLPP6Q8IY26 295 aa14.14□□□□□ -0.15
CALD1-217ENST00000475772 WDR90Q96KV7 1748 aa14.13□□□□□ -0.15
CALD1-217ENST00000475772 SNPHO15079 494 aa14.13□□□□□ -0.15
CALD1-217ENST00000475772 CANXP27824 592 aaKnown RBP14.13□□□□□ -0.15
CALD1-217ENST00000475772 DLEC1Q9Y238 1755 aa14.13□□□□□ -0.15
CALD1-217ENST00000475772 COL3A1P02461 1466 aaPredicted RBP14.12□□□□□ -0.15
CALD1-217ENST00000475772 ANKRD31Q8N7Z5 1873 aa14.12□□□□□ -0.15
CALD1-217ENST00000475772 CARMIL3Q8ND23 1372 aa14.12□□□□□ -0.15
CALD1-217ENST00000475772 SIPA1L3O60292 1781 aaPredicted RBP14.11□□□□□ -0.15
CALD1-217ENST00000475772 ZNF496Q96IT1 587 aaPredicted RBP14.11□□□□□ -0.15
CALD1-217ENST00000475772 FSTL1Q12841 308 aa14.1□□□□□ -0.15
CALD1-217ENST00000475772 TBC1D9BQ66K14 1250 aa14.1□□□□□ -0.15
CALD1-217ENST00000475772 ZNF790Q6PG37 636 aa14.1□□□□□ -0.15
CALD1-217ENST00000475772 KDM2BQ8NHM5 1336 aa14.1□□□□□ -0.15
CALD1-217ENST00000475772 POTECB2RU33 542 aa14.09□□□□□ -0.15
CALD1-217ENST00000475772 NFKBIEO00221 500 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms