RNA–Protein interactions for RNA: ENST00000475683.1

TUBA4A-209, Transcript of tubulin alpha 4a, humanhuman

TSL 2

Gene TUBA4A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-209ENST00000475683 KCNQ3O43525 872 aa17.67■□□□□ 0.42
TUBA4A-209ENST00000475683 A1BGP04217 495 aa17.67■□□□□ 0.42
TUBA4A-209ENST00000475683 ZNF790Q6PG37 636 aa17.67■□□□□ 0.42
TUBA4A-209ENST00000475683 STARD3NLO95772 234 aa17.66■□□□□ 0.42
TUBA4A-209ENST00000475683 PIP4K2AP48426 406 aaPredicted RBP17.66■□□□□ 0.42
TUBA4A-209ENST00000475683 RUNDC1Q96C34 613 aa17.66■□□□□ 0.42
TUBA4A-209ENST00000475683 APAF1O14727 1248 aa17.65■□□□□ 0.42
TUBA4A-209ENST00000475683 POTEIP0CG38 1075 aa17.65■□□□□ 0.42
TUBA4A-209ENST00000475683 POTEJP0CG39 1038 aa17.65■□□□□ 0.42
TUBA4A-209ENST00000475683 TEFQ10587 303 aa17.65■□□□□ 0.42
TUBA4A-209ENST00000475683 A0A087WZG4 1122 aa17.64■□□□□ 0.41
TUBA4A-209ENST00000475683 GNAT3A8MTJ3 354 aa17.64■□□□□ 0.41
TUBA4A-209ENST00000475683 CAMTA2O94983 1202 aa17.64■□□□□ 0.41
TUBA4A-209ENST00000475683 HSPA1AP0DMV8 641 aaKnown RBP17.64■□□□□ 0.41
TUBA4A-209ENST00000475683 HSPA1BP0DMV9 641 aaKnown RBP17.64■□□□□ 0.41
TUBA4A-209ENST00000475683 BRIP1Q9BX63 1249 aa17.64■□□□□ 0.41
TUBA4A-209ENST00000475683 PRAMEF22A3QJZ6 481 aa17.63■□□□□ 0.41
TUBA4A-209ENST00000475683 ERFEQ4G0M1 354 aa17.63■□□□□ 0.41
TUBA4A-209ENST00000475683 PNNQ9H307 717 aaKnown RBP17.63■□□□□ 0.41
TUBA4A-209ENST00000475683 CEMIPQ8WUJ3 1361 aa17.63■□□□□ 0.41
TUBA4A-209ENST00000475683 PDE6BP35913 854 aa17.62■□□□□ 0.41
TUBA4A-209ENST00000475683 IL6STP40189 918 aaPredicted RBP17.62■□□□□ 0.41
TUBA4A-209ENST00000475683 TNS4Q8IZW8 715 aa17.62■□□□□ 0.41
TUBA4A-209ENST00000475683 RRP7AQ9Y3A4 280 aaKnown RBP17.62■□□□□ 0.41
TUBA4A-209ENST00000475683 DDNO94850 711 aaPredicted RBP17.61■□□□□ 0.41
TUBA4A-209ENST00000475683 NEUROD2Q15784 382 aa17.61■□□□□ 0.41
TUBA4A-209ENST00000475683 GAS2L2Q8NHY3 880 aa17.61■□□□□ 0.41
TUBA4A-209ENST00000475683 SALL2Q9Y467 1007 aaPredicted RBP17.61■□□□□ 0.41
TUBA4A-209ENST00000475683 USP16Q9Y5T5 823 aa17.61■□□□□ 0.41
TUBA4A-209ENST00000475683 TMPOP42166 694 aaKnown RBP17.6■□□□□ 0.41
TUBA4A-209ENST00000475683 DPY19L2Q6NUT2 758 aa17.6■□□□□ 0.41
TUBA4A-209ENST00000475683 PRPF40BQ6NWY9 871 aaKnown RBP17.6■□□□□ 0.41
TUBA4A-209ENST00000475683 CNBD1Q8NA66 436 aa17.6■□□□□ 0.41
TUBA4A-209ENST00000475683 FMNL2Q96PY5 1086 aa17.6■□□□□ 0.41
TUBA4A-209ENST00000475683 LTBP3Q9NS15 1303 aa17.6■□□□□ 0.41
TUBA4A-209ENST00000475683 SCN4AP35499 1836 aa17.6■□□□□ 0.41
TUBA4A-209ENST00000475683 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
TUBA4A-209ENST00000475683 SRGNP10124 158 aa17.59■□□□□ 0.41
TUBA4A-209ENST00000475683 DZIP3Q86Y13 1208 aaKnown RBP17.59■□□□□ 0.41
TUBA4A-209ENST00000475683 YTHDC1Q96MU7 727 aaKnown RBP17.59■□□□□ 0.41
TUBA4A-209ENST00000475683 SETDB2Q96T68 719 aa17.59■□□□□ 0.41
TUBA4A-209ENST00000475683 TEX13AQ9BXU3 409 aaPredicted RBP17.59■□□□□ 0.41
TUBA4A-209ENST00000475683 TAOK3Q9H2K8 898 aa17.59■□□□□ 0.41
TUBA4A-209ENST00000475683 DLG5Q8TDM6 1919 aa17.59■□□□□ 0.41
TUBA4A-209ENST00000475683 BTBD11A6QL63 1104 aa17.58■□□□□ 0.4
TUBA4A-209ENST00000475683 NFE2L2Q16236 605 aa17.58■□□□□ 0.4
TUBA4A-209ENST00000475683 OLFM4Q6UX06 510 aa17.58■□□□□ 0.4
TUBA4A-209ENST00000475683 LAMB4A4D0S4 1761 aa17.58■□□□□ 0.4
TUBA4A-209ENST00000475683 NEFMP07197 916 aa17.57■□□□□ 0.4
TUBA4A-209ENST00000475683 RIPK4P57078 832 aa17.57■□□□□ 0.4
TUBA4A-209ENST00000475683 STYK1Q6J9G0 422 aa17.57■□□□□ 0.4
TUBA4A-209ENST00000475683 MKRN1Q9UHC7 482 aaKnown RBP17.57■□□□□ 0.4
TUBA4A-209ENST00000475683 PDZRN3Q9UPQ7 1066 aa17.57■□□□□ 0.4
TUBA4A-209ENST00000475683 ADAMTSL1Q8N6G6 1762 aa17.56■□□□□ 0.4
TUBA4A-209ENST00000475683 NPHP1O15259 732 aa17.56■□□□□ 0.4
TUBA4A-209ENST00000475683 ST5P78524 1137 aa17.56■□□□□ 0.4
TUBA4A-209ENST00000475683 HNRNPUQ00839 825 aaKnown RBP eCLIP17.56■□□□□ 0.4
TUBA4A-209ENST00000475683 CHADLQ6NUI6 762 aa17.56■□□□□ 0.4
TUBA4A-209ENST00000475683 C7orf43Q8WVR3 580 aa17.56■□□□□ 0.4
TUBA4A-209ENST00000475683 CNKSR1Q969H4 720 aa17.56■□□□□ 0.4
TUBA4A-209ENST00000475683 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
TUBA4A-209ENST00000475683 NUP98P52948 1817 aa17.56■□□□□ 0.4
TUBA4A-209ENST00000475683 MCM10Q7L590 875 aa17.55■□□□□ 0.4
TUBA4A-209ENST00000475683 MASTLQ96GX5 879 aa17.55■□□□□ 0.4
TUBA4A-209ENST00000475683 ZNF541Q9H0D2 1346 aa17.54■□□□□ 0.4
TUBA4A-209ENST00000475683 NBPF26B4DH59 902 aa17.54■□□□□ 0.4
TUBA4A-209ENST00000475683 DCTN1Q14203 1278 aa17.54■□□□□ 0.4
TUBA4A-209ENST00000475683 NBPF10Q6P3W6 841 aaKnown RBP17.54■□□□□ 0.4
TUBA4A-209ENST00000475683 NBPF15Q8N660 670 aa17.54■□□□□ 0.4
TUBA4A-209ENST00000475683 NBPF5PQ86XG9 351 aaPredicted RBP17.53■□□□□ 0.4
TUBA4A-209ENST00000475683 CREBZFQ9NS37 354 aa17.53■□□□□ 0.4
TUBA4A-209ENST00000475683 KDM3BQ7LBC6 1761 aa17.53■□□□□ 0.4
TUBA4A-209ENST00000475683 FAM177BA6PVY3 158 aa17.52■□□□□ 0.4
TUBA4A-209ENST00000475683 NPM2Q86SE8 214 aaKnown RBP17.52■□□□□ 0.4
TUBA4A-209ENST00000475683 THUMPD2Q9BTF0 503 aaKnown RBP17.52■□□□□ 0.4
TUBA4A-209ENST00000475683 ZNF277Q9NRM2 450 aaPredicted RBP17.52■□□□□ 0.4
TUBA4A-209ENST00000475683 COL4A5P29400 1685 aa17.52■□□□□ 0.39
TUBA4A-209ENST00000475683 PASKQ96RG2 1323 aa17.51■□□□□ 0.39
TUBA4A-209ENST00000475683 TAF1DQ9H5J8 278 aaPredicted RBP17.51■□□□□ 0.39
TUBA4A-209ENST00000475683 LTBP1Q14766 1721 aa17.5■□□□□ 0.39
TUBA4A-209ENST00000475683 HLFQ16534 295 aa17.5■□□□□ 0.39
TUBA4A-209ENST00000475683 CCDC93Q567U6 631 aa17.5■□□□□ 0.39
TUBA4A-209ENST00000475683 SLC51AQ86UW1 340 aa17.5■□□□□ 0.39
TUBA4A-209ENST00000475683 WWC1Q8IX03 1113 aa17.5■□□□□ 0.39
TUBA4A-209ENST00000475683 L3MBTL3Q96JM7 780 aaPredicted RBP17.5■□□□□ 0.39
TUBA4A-209ENST00000475683 CNTNAP1P78357 1384 aa17.5■□□□□ 0.39
TUBA4A-209ENST00000475683 SNED1Q8TER0 1413 aa17.49■□□□□ 0.39
TUBA4A-209ENST00000475683 KLRG2A4D1S0 409 aaPredicted RBP17.49■□□□□ 0.39
TUBA4A-209ENST00000475683 FOXN1O15353 648 aa17.49■□□□□ 0.39
TUBA4A-209ENST00000475683 SNRPA1P09661 255 aaKnown RBP17.49■□□□□ 0.39
TUBA4A-209ENST00000475683 NPR1P16066 1061 aa17.49■□□□□ 0.39
TUBA4A-209ENST00000475683 FKBP4Q02790 459 aaKnown RBP eCLIP17.49■□□□□ 0.39
TUBA4A-209ENST00000475683 SOGA3Q5TF21 947 aa17.49■□□□□ 0.39
TUBA4A-209ENST00000475683 CLEC4GQ6UXB4 293 aa17.49■□□□□ 0.39
TUBA4A-209ENST00000475683 NIP7Q9Y221 180 aaKnown RBP eCLIP17.49■□□□□ 0.39
TUBA4A-209ENST00000475683 ABCC12Q96J65 1359 aa17.49■□□□□ 0.39
TUBA4A-209ENST00000475683 CCDC27Q2M243 656 aa17.48■□□□□ 0.39
TUBA4A-209ENST00000475683 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
TUBA4A-209ENST00000475683 EAPPQ56P03 285 aaPredicted RBP17.48■□□□□ 0.39
TUBA4A-209ENST00000475683 LDHDQ86WU2 507 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms