RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 DDX41Q9UJV9 622 aaKnown RBP21.12■□□□□ 0.97
CCM2-207ENST00000475551 SOS1Q07889 1333 aaPredicted RBP21.12■□□□□ 0.97
CCM2-207ENST00000475551 RAB11FIP3O75154 756 aa21.12■□□□□ 0.97
CCM2-207ENST00000475551 CCDC186Q7Z3E2 898 aa21.12■□□□□ 0.97
CCM2-207ENST00000475551 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.12■□□□□ 0.97
CCM2-207ENST00000475551 PI4K2BQ8TCG2 481 aa21.12■□□□□ 0.97
CCM2-207ENST00000475551 SH2B1Q9NRF2 756 aaPredicted RBP21.12■□□□□ 0.97
CCM2-207ENST00000475551 MIS18AQ9NYP9 233 aa21.12■□□□□ 0.97
CCM2-207ENST00000475551 TYRO3Q06418 890 aa21.11■□□□□ 0.97
CCM2-207ENST00000475551 LARP6Q9BRS8 491 aaKnown RBP21.11■□□□□ 0.97
CCM2-207ENST00000475551 LRRFIP2Q9Y608 721 aaKnown RBP21.11■□□□□ 0.97
CCM2-207ENST00000475551 LARGE1O95461 756 aa21.11■□□□□ 0.97
CCM2-207ENST00000475551 PDIA4P13667 645 aaKnown RBP21.11■□□□□ 0.97
CCM2-207ENST00000475551 FLIIQ13045 1269 aa21.11■□□□□ 0.97
CCM2-207ENST00000475551 NWD1Q149M9 1564 aa21.11■□□□□ 0.97
CCM2-207ENST00000475551 NUP62CLQ9H1M0 184 aa21.11■□□□□ 0.97
CCM2-207ENST00000475551 STRCP1A6NGW2 1772 aa21.1■□□□□ 0.97
CCM2-207ENST00000475551 ELP1O95163 1332 aa21.1■□□□□ 0.97
CCM2-207ENST00000475551 TNNT1P13805 278 aa21.1■□□□□ 0.97
CCM2-207ENST00000475551 VPS53Q5VIR6 699 aa21.1■□□□□ 0.97
CCM2-207ENST00000475551 ZNF771Q7L3S4 317 aaPredicted RBP21.1■□□□□ 0.97
CCM2-207ENST00000475551 CCDC83Q8IWF9 413 aa21.1■□□□□ 0.97
CCM2-207ENST00000475551 SSH3Q8TE77 659 aa21.1■□□□□ 0.97
CCM2-207ENST00000475551 NUDT16Q96DE0 195 aaKnown RBP21.1■□□□□ 0.97
CCM2-207ENST00000475551 IL1RAPL2Q9NP60 686 aa21.1■□□□□ 0.97
CCM2-207ENST00000475551 MORC2Q9Y6X9 1032 aaPredicted RBP21.1■□□□□ 0.97
CCM2-207ENST00000475551 CASTP20810 708 aaKnown RBP21.09■□□□□ 0.97
CCM2-207ENST00000475551 PLA2G4DQ86XP0 818 aa21.09■□□□□ 0.97
CCM2-207ENST00000475551 NUTM1Q86Y26 1132 aa21.09■□□□□ 0.97
CCM2-207ENST00000475551 CNTROBQ8N137 903 aa21.09■□□□□ 0.97
CCM2-207ENST00000475551 C16orf45Q96MC5 204 aaPredicted RBP21.09■□□□□ 0.97
CCM2-207ENST00000475551 CCDC61Q9Y6R9 512 aa21.09■□□□□ 0.97
CCM2-207ENST00000475551 CCDC171Q6TFL3 1326 aa21.09■□□□□ 0.97
CCM2-207ENST00000475551 ZNF335Q9H4Z2 1342 aaPredicted RBP21.09■□□□□ 0.97
CCM2-207ENST00000475551 RGPD1P0DJD0 1748 aa21.09■□□□□ 0.97
CCM2-207ENST00000475551 IGSF3O75054 1194 aa21.09■□□□□ 0.97
CCM2-207ENST00000475551 LUZP1Q86V48 1076 aa21.09■□□□□ 0.97
CCM2-207ENST00000475551 KRT85P78386 507 aa21.08■□□□□ 0.97
CCM2-207ENST00000475551 FGD1P98174 961 aa21.08■□□□□ 0.97
CCM2-207ENST00000475551 ZSCAN25Q6NSZ9 544 aa21.08■□□□□ 0.97
CCM2-207ENST00000475551 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.08■□□□□ 0.96
CCM2-207ENST00000475551 LRMPQ12912 555 aa21.07■□□□□ 0.96
CCM2-207ENST00000475551 TTC6Q86TZ1 520 aa21.07■□□□□ 0.96
CCM2-207ENST00000475551 CCDC112Q8NEF3 446 aa21.07■□□□□ 0.96
CCM2-207ENST00000475551 TM6SF1Q9BZW5 370 aa21.07■□□□□ 0.96
CCM2-207ENST00000475551 CBX8Q9HC52 389 aa21.07■□□□□ 0.96
CCM2-207ENST00000475551 AKAP12Q02952 1782 aa21.07■□□□□ 0.96
CCM2-207ENST00000475551 MAP4K4O95819 1239 aaPredicted RBP21.07■□□□□ 0.96
CCM2-207ENST00000475551 ZNF75DP51815 510 aa21.07■□□□□ 0.96
CCM2-207ENST00000475551 PDRG1Q9NUG6 133 aa21.07■□□□□ 0.96
CCM2-207ENST00000475551 PXDNLA1KZ92 1463 aa21.07■□□□□ 0.96
CCM2-207ENST00000475551 CCDC30Q5VVM6 783 aa21.06■□□□□ 0.96
CCM2-207ENST00000475551 VPS37CA5D8V6 355 aaPredicted RBP21.06■□□□□ 0.96
CCM2-207ENST00000475551 RBM43Q6ZSC3 357 aaKnown RBP21.06■□□□□ 0.96
CCM2-207ENST00000475551 DRC7Q8IY82 874 aa21.06■□□□□ 0.96
CCM2-207ENST00000475551 TDRD7Q8NHU6 1098 aaKnown RBP21.06■□□□□ 0.96
CCM2-207ENST00000475551 USP44Q9H0E7 712 aa21.06■□□□□ 0.96
CCM2-207ENST00000475551 N4BP2Q86UW6 1770 aaPredicted RBP21.06■□□□□ 0.96
CCM2-207ENST00000475551 SLFN14P0C7P3 912 aa21.05■□□□□ 0.96
CCM2-207ENST00000475551 LIG1P18858 919 aa21.05■□□□□ 0.96
CCM2-207ENST00000475551 KCNB2Q92953 911 aa21.05■□□□□ 0.96
CCM2-207ENST00000475551 ZSWIM6Q9HCJ5 1215 aa21.05■□□□□ 0.96
CCM2-207ENST00000475551 CPA1P15085 419 aa21.05■□□□□ 0.96
CCM2-207ENST00000475551 ANO6Q4KMQ2 910 aa21.05■□□□□ 0.96
CCM2-207ENST00000475551 PROSER2Q86WR7 435 aaPredicted RBP21.05■□□□□ 0.96
CCM2-207ENST00000475551 RHPN1Q8TCX5 695 aa21.05■□□□□ 0.96
CCM2-207ENST00000475551 NRBP1Q9UHY1 535 aa21.05■□□□□ 0.96
CCM2-207ENST00000475551 UBTFL1P0CB47 393 aaPredicted RBP21.04■□□□□ 0.96
CCM2-207ENST00000475551 ST3GAL1Q11201 340 aa21.04■□□□□ 0.96
CCM2-207ENST00000475551 POLA2Q14181 598 aa21.04■□□□□ 0.96
CCM2-207ENST00000475551 KIF18AQ8NI77 898 aa21.04■□□□□ 0.96
CCM2-207ENST00000475551 TRIM5Q9C035 493 aa21.04■□□□□ 0.96
CCM2-207ENST00000475551 TNMDQ9H2S6 317 aa21.04■□□□□ 0.96
CCM2-207ENST00000475551 DDX19AQ9NUU7 478 aaKnown RBP21.04■□□□□ 0.96
CCM2-207ENST00000475551 TTC21AQ8NDW8 1320 aa21.04■□□□□ 0.96
CCM2-207ENST00000475551 ITSN1Q15811 1721 aa21.04■□□□□ 0.96
CCM2-207ENST00000475551 CRYBG1Q9Y4K1 1723 aa21.04■□□□□ 0.96
CCM2-207ENST00000475551 FAM208AQ9UK61 1670 aaKnown RBP21.03■□□□□ 0.96
CCM2-207ENST00000475551 CAMK4Q16566 473 aa21.03■□□□□ 0.96
CCM2-207ENST00000475551 CWC27Q6UX04 472 aaKnown RBP21.03■□□□□ 0.96
CCM2-207ENST00000475551 KIF1BPQ96EK5 621 aa21.03■□□□□ 0.96
CCM2-207ENST00000475551 CYP46A1Q9Y6A2 500 aa21.03■□□□□ 0.96
CCM2-207ENST00000475551 TTC21BQ7Z4L5 1316 aa21.03■□□□□ 0.96
CCM2-207ENST00000475551 SURF6O75683 361 aaKnown RBP21.03■□□□□ 0.96
CCM2-207ENST00000475551 CDC25BP30305 580 aa21.03■□□□□ 0.96
CCM2-207ENST00000475551 MTHFSDQ2M296 383 aaKnown RBP21.03■□□□□ 0.96
CCM2-207ENST00000475551 JAKMIP1Q96N16 626 aaKnown RBP21.03■□□□□ 0.96
CCM2-207ENST00000475551 SPG7Q9UQ90 795 aa21.03■□□□□ 0.96
CCM2-207ENST00000475551 TPD52L1Q16890 204 aaPredicted RBP21.02■□□□□ 0.96
CCM2-207ENST00000475551 USP42Q9H9J4 1324 aaKnown RBP21.02■□□□□ 0.96
CCM2-207ENST00000475551 MAP3K5Q99683 1374 aa21.02■□□□□ 0.96
CCM2-207ENST00000475551 ME3Q16798 604 aa21.02■□□□□ 0.96
CCM2-207ENST00000475551 LARP1BQ659C4 914 aaKnown RBP21.02■□□□□ 0.96
CCM2-207ENST00000475551 RUFY2Q8WXA3 655 aa21.02■□□□□ 0.96
CCM2-207ENST00000475551 FOXO3O43524 673 aa21.01■□□□□ 0.95
CCM2-207ENST00000475551 HSP90AB2PQ58FF8 381 aa21.01■□□□□ 0.95
CCM2-207ENST00000475551 SCAND2PQ9GZW5 306 aaPredicted RBP21.01■□□□□ 0.95
CCM2-207ENST00000475551 DACT1Q9NYF0 836 aa21.01■□□□□ 0.95
CCM2-207ENST00000475551 NAA30Q147X3 362 aaPredicted RBP21.01■□□□□ 0.95
CCM2-207ENST00000475551 ADCK5Q3MIX3 580 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms