RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 A0A1W2PRG0 241 aa16.41■□□□□ 0.22
SSPO-205ENST00000475488 HDAC9Q9UKV0 1011 aa16.41■□□□□ 0.22
SSPO-205ENST00000475488 YEATS4O95619 227 aa16.41■□□□□ 0.22
SSPO-205ENST00000475488 C6orf163Q5TEZ5 329 aa16.41■□□□□ 0.22
SSPO-205ENST00000475488 CCDC83Q8IWF9 413 aa16.41■□□□□ 0.22
SSPO-205ENST00000475488 CDC5LQ99459 802 aaKnown RBP16.41■□□□□ 0.22
SSPO-205ENST00000475488 CCDC144CPQ8IYA2 1237 aa16.41■□□□□ 0.22
SSPO-205ENST00000475488 TSPY2A6NKD2 308 aa16.41■□□□□ 0.22
SSPO-205ENST00000475488 GOLGA8AA7E2F4 631 aa16.41■□□□□ 0.22
SSPO-205ENST00000475488 GOLGA8BA8MQT2 603 aa16.41■□□□□ 0.22
SSPO-205ENST00000475488 EXOC5O00471 708 aa16.41■□□□□ 0.22
SSPO-205ENST00000475488 FAM114A1Q8IWE2 563 aa16.41■□□□□ 0.22
SSPO-205ENST00000475488 TTC12Q9H892 705 aaPredicted RBP16.41■□□□□ 0.22
SSPO-205ENST00000475488 ANO10Q9NW15 660 aa16.4■□□□□ 0.22
SSPO-205ENST00000475488 ZNF644Q9H582 1327 aaPredicted RBP16.4■□□□□ 0.22
SSPO-205ENST00000475488 DPH6Q7L8W6 267 aa16.4■□□□□ 0.22
SSPO-205ENST00000475488 HMGB1P09429 215 aaKnown RBP16.4■□□□□ 0.22
SSPO-205ENST00000475488 GPTP24298 496 aa16.4■□□□□ 0.22
SSPO-205ENST00000475488 FANCIQ9NVI1 1328 aa16.4■□□□□ 0.22
SSPO-205ENST00000475488 MICALCLQ6ZW33 695 aa16.4■□□□□ 0.22
SSPO-205ENST00000475488 CCDC117Q8IWD4 279 aaPredicted RBP16.4■□□□□ 0.22
SSPO-205ENST00000475488 TBCAO75347 108 aaKnown RBP16.39■□□□□ 0.21
SSPO-205ENST00000475488 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
SSPO-205ENST00000475488 SFPQP23246 707 aaKnown RBP eCLIP16.39■□□□□ 0.21
SSPO-205ENST00000475488 GSTO1P78417 241 aa16.39■□□□□ 0.21
SSPO-205ENST00000475488 ERBINQ96RT1 1412 aa16.39■□□□□ 0.21
SSPO-205ENST00000475488 AFAP1Q8N556 730 aa16.38■□□□□ 0.21
SSPO-205ENST00000475488 LDHCP07864 332 aa16.38■□□□□ 0.21
SSPO-205ENST00000475488 CPLX3Q8WVH0 158 aa16.38■□□□□ 0.21
SSPO-205ENST00000475488 FAM212AQ96EL1 285 aa16.38■□□□□ 0.21
SSPO-205ENST00000475488 PSMC4P43686 418 aa16.38■□□□□ 0.21
SSPO-205ENST00000475488 CCDC172P0C7W6 258 aa16.38■□□□□ 0.21
SSPO-205ENST00000475488 DDX12PQ92771 950 aa16.38■□□□□ 0.21
SSPO-205ENST00000475488 PDE3AQ14432 1141 aa16.37■□□□□ 0.21
SSPO-205ENST00000475488 TTF1Q15361 905 aaPredicted RBP16.37■□□□□ 0.21
SSPO-205ENST00000475488 PTPN14Q15678 1187 aa16.37■□□□□ 0.21
SSPO-205ENST00000475488 PPP1R42Q7Z4L9 355 aa16.37■□□□□ 0.21
SSPO-205ENST00000475488 BBXQ8WY36 941 aaPredicted RBP16.37■□□□□ 0.21
SSPO-205ENST00000475488 WDR63Q8IWG1 891 aa16.37■□□□□ 0.21
SSPO-205ENST00000475488 IFI16Q16666 785 aaKnown RBP16.37■□□□□ 0.21
SSPO-205ENST00000475488 GLRX3O76003 335 aaKnown RBP16.37■□□□□ 0.21
SSPO-205ENST00000475488 SNX16P57768 344 aa16.37■□□□□ 0.21
SSPO-205ENST00000475488 MVPQ14764 893 aaKnown RBP16.37■□□□□ 0.21
SSPO-205ENST00000475488 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
SSPO-205ENST00000475488 IDEP14735 1019 aa16.37■□□□□ 0.21
SSPO-205ENST00000475488 OGFOD1Q8N543 542 aa16.36■□□□□ 0.21
SSPO-205ENST00000475488 PAIP2Q9BPZ3 127 aaKnown RBP16.36■□□□□ 0.21
SSPO-205ENST00000475488 TMEM67Q5HYA8 995 aa16.36■□□□□ 0.21
SSPO-205ENST00000475488 PRPF40BQ6NWY9 871 aaKnown RBP16.36■□□□□ 0.21
SSPO-205ENST00000475488 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
SSPO-205ENST00000475488 LRRC27Q9C0I9 530 aa16.36■□□□□ 0.21
SSPO-205ENST00000475488 KIF4AO95239 1232 aa16.36■□□□□ 0.21
SSPO-205ENST00000475488 USP37Q86T82 979 aa16.36■□□□□ 0.21
SSPO-205ENST00000475488 EXOC1Q9NV70 894 aa16.36■□□□□ 0.21
SSPO-205ENST00000475488 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
SSPO-205ENST00000475488 AMOTQ4VCS5 1084 aa16.36■□□□□ 0.21
SSPO-205ENST00000475488 DUSP27Q5VZP5 1158 aa16.36■□□□□ 0.21
SSPO-205ENST00000475488 URI1O94763 535 aaPredicted RBP16.36■□□□□ 0.21
SSPO-205ENST00000475488 MXRA7P84157 204 aa16.36■□□□□ 0.21
SSPO-205ENST00000475488 USHBP1Q8N6Y0 703 aa16.35■□□□□ 0.21
SSPO-205ENST00000475488 ANKRD30BQ9BXX2 1392 aa16.35■□□□□ 0.21
SSPO-205ENST00000475488 IQCGQ9H095 443 aaKnown RBP16.35■□□□□ 0.21
SSPO-205ENST00000475488 B4DLN1 442 aa16.35■□□□□ 0.21
SSPO-205ENST00000475488 MRPL12P52815 198 aaKnown RBP16.35■□□□□ 0.21
SSPO-205ENST00000475488 CCT2P78371 535 aaKnown RBP16.35■□□□□ 0.21
SSPO-205ENST00000475488 EXOC6BQ9Y2D4 811 aa16.35■□□□□ 0.21
SSPO-205ENST00000475488 SUPT6HQ7KZ85 1726 aaKnown RBP16.35■□□□□ 0.21
SSPO-205ENST00000475488 MAATS1Q7Z4T9 603 aa16.35■□□□□ 0.21
SSPO-205ENST00000475488 TSPY3P0CV98 308 aa16.35■□□□□ 0.21
SSPO-205ENST00000475488 TSPY8P0CW00 308 aa16.35■□□□□ 0.21
SSPO-205ENST00000475488 CCDC63Q8NA47 563 aa16.35■□□□□ 0.21
SSPO-205ENST00000475488 ERMNQ8TAM6 284 aa16.35■□□□□ 0.21
SSPO-205ENST00000475488 MAP7D1Q3KQU3 841 aa16.35■□□□□ 0.21
SSPO-205ENST00000475488 PLVAPQ9BX97 442 aa16.35■□□□□ 0.21
SSPO-205ENST00000475488 SPECC1LQ69YQ0 1117 aa16.34■□□□□ 0.21
SSPO-205ENST00000475488 GRPEL1Q9HAV7 217 aa16.34■□□□□ 0.21
SSPO-205ENST00000475488 EPRSP07814 1512 aaKnown RBP16.34■□□□□ 0.21
SSPO-205ENST00000475488 PYM1Q9BRP8 204 aaKnown RBP16.34■□□□□ 0.21
SSPO-205ENST00000475488 F8W031 263 aaPredicted RBP16.34■□□□□ 0.21
SSPO-205ENST00000475488 KIF2AO00139 706 aaPredicted RBP16.34■□□□□ 0.21
SSPO-205ENST00000475488 MFSD6Q6ZSS7 791 aa16.34■□□□□ 0.21
SSPO-205ENST00000475488 CRNKL1Q9BZJ0 848 aaKnown RBP16.34■□□□□ 0.21
SSPO-205ENST00000475488 KIAA0753Q2KHM9 967 aa16.33■□□□□ 0.21
SSPO-205ENST00000475488 CTR9Q6PD62 1173 aa16.33■□□□□ 0.21
SSPO-205ENST00000475488 HYPKQ9NX55 129 aa16.33■□□□□ 0.21
SSPO-205ENST00000475488 BIRC2Q13490 618 aa16.33■□□□□ 0.2
SSPO-205ENST00000475488 CCDC155Q8N6L0 562 aa16.33■□□□□ 0.2
SSPO-205ENST00000475488 IMPG2Q9BZV3 1241 aa16.33■□□□□ 0.2
SSPO-205ENST00000475488 CCDC8Q9H0W5 538 aaPredicted RBP16.33■□□□□ 0.2
SSPO-205ENST00000475488 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.2
SSPO-205ENST00000475488 LMOD1P29536 600 aaPredicted RBP16.33■□□□□ 0.2
SSPO-205ENST00000475488 CEP135Q66GS9 1140 aa16.33■□□□□ 0.2
SSPO-205ENST00000475488 KIF18AQ8NI77 898 aa16.33■□□□□ 0.2
SSPO-205ENST00000475488 NUDT16Q96DE0 195 aaKnown RBP16.33■□□□□ 0.2
SSPO-205ENST00000475488 GAS8O95995 478 aa16.33■□□□□ 0.2
SSPO-205ENST00000475488 KRT13P13646 458 aa16.33■□□□□ 0.2
SSPO-205ENST00000475488 TAF7Q15545 349 aaPredicted RBP16.33■□□□□ 0.2
SSPO-205ENST00000475488 GSTA5Q7RTV2 222 aa16.33■□□□□ 0.2
SSPO-205ENST00000475488 FERMT3Q86UX7 667 aa16.33■□□□□ 0.2
SSPO-205ENST00000475488 SLC52A1Q9NWF4 448 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms