RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 USP26Q9BXU7 913 aa18.85■□□□□ 0.61
RPUSD3-215ENST00000475470 LTBP4Q8N2S1 1624 aa18.85■□□□□ 0.61
RPUSD3-215ENST00000475470 COL22A1Q8NFW1 1626 aaPredicted RBP18.85■□□□□ 0.61
RPUSD3-215ENST00000475470 ERC2O15083 957 aa18.84■□□□□ 0.61
RPUSD3-215ENST00000475470 PAPPAQ13219 1627 aa18.84■□□□□ 0.61
RPUSD3-215ENST00000475470 NBPF26B4DH59 902 aa18.84■□□□□ 0.61
RPUSD3-215ENST00000475470 NFKBIBQ15653 356 aa18.84■□□□□ 0.61
RPUSD3-215ENST00000475470 NBPF14Q5TI25 921 aa18.84■□□□□ 0.61
RPUSD3-215ENST00000475470 NBPF10Q6P3W6 841 aaKnown RBP18.84■□□□□ 0.61
RPUSD3-215ENST00000475470 ERC1Q8IUD2 1116 aa18.84■□□□□ 0.61
RPUSD3-215ENST00000475470 NBPF15Q8N660 670 aa18.84■□□□□ 0.61
RPUSD3-215ENST00000475470 SPRYD3Q8NCJ5 442 aa18.83■□□□□ 0.61
RPUSD3-215ENST00000475470 PA2G4Q9UQ80 394 aaKnown RBP18.83■□□□□ 0.61
RPUSD3-215ENST00000475470 CLASRPQ8N2M8 674 aaKnown RBP18.83■□□□□ 0.6
RPUSD3-215ENST00000475470 TUBGCP6Q96RT7 1819 aa18.83■□□□□ 0.6
RPUSD3-215ENST00000475470 A1BGP04217 495 aa18.82■□□□□ 0.6
RPUSD3-215ENST00000475470 TNS2Q63HR2 1409 aa18.82■□□□□ 0.6
RPUSD3-215ENST00000475470 ANTXR1Q9H6X2 564 aa18.82■□□□□ 0.6
RPUSD3-215ENST00000475470 TOGARAM1Q9Y4F4 1720 aa18.82■□□□□ 0.6
RPUSD3-215ENST00000475470 ARFGEF2Q9Y6D5 1785 aa18.82■□□□□ 0.6
RPUSD3-215ENST00000475470 ATP5J2-PTCD1G3V325 749 aa18.81■□□□□ 0.6
RPUSD3-215ENST00000475470 COL16A1Q07092 1604 aaPredicted RBP18.81■□□□□ 0.6
RPUSD3-215ENST00000475470 G3BP1Q13283 466 aaKnown RBP eCLIP18.81■□□□□ 0.6
RPUSD3-215ENST00000475470 AFDNP55196 1824 aaKnown RBP18.8■□□□□ 0.6
RPUSD3-215ENST00000475470 DISP2A7MBM2 1401 aa18.8■□□□□ 0.6
RPUSD3-215ENST00000475470 PIGBQ92521 554 aa18.8■□□□□ 0.6
RPUSD3-215ENST00000475470 EXOC5O00471 708 aa18.8■□□□□ 0.6
RPUSD3-215ENST00000475470 PI4K2BQ8TCG2 481 aa18.8■□□□□ 0.6
RPUSD3-215ENST00000475470 A0A087WZG4 1122 aa18.79■□□□□ 0.6
RPUSD3-215ENST00000475470 CHMLP26374 656 aa18.79■□□□□ 0.6
RPUSD3-215ENST00000475470 UBE3BQ7Z3V4 1068 aa18.79■□□□□ 0.6
RPUSD3-215ENST00000475470 UNC5CLQ8IV45 518 aa18.79■□□□□ 0.6
RPUSD3-215ENST00000475470 JARID2Q92833 1246 aaPredicted RBP18.79■□□□□ 0.6
RPUSD3-215ENST00000475470 ESYT1Q9BSJ8 1104 aa18.79■□□□□ 0.6
RPUSD3-215ENST00000475470 RBM42Q9BTD8 480 aaKnown RBP18.79■□□□□ 0.6
RPUSD3-215ENST00000475470 ADAMTS2O95450 1211 aa18.79■□□□□ 0.6
RPUSD3-215ENST00000475470 TTLL7Q6ZT98 887 aa18.79■□□□□ 0.6
RPUSD3-215ENST00000475470 ASAP1Q9ULH1 1129 aa18.79■□□□□ 0.6
RPUSD3-215ENST00000475470 PHLPP1O60346 1717 aa18.78■□□□□ 0.6
RPUSD3-215ENST00000475470 IFIT2P09913 472 aaKnown RBP18.78■□□□□ 0.6
RPUSD3-215ENST00000475470 EPHA10Q5JZY3 1008 aa18.78■□□□□ 0.6
RPUSD3-215ENST00000475470 TTC41PQ6P2S7 1318 aa18.78■□□□□ 0.6
RPUSD3-215ENST00000475470 RABEP1Q15276 862 aa18.78■□□□□ 0.6
RPUSD3-215ENST00000475470 MAP4K4O95819 1239 aaPredicted RBP18.77■□□□□ 0.6
RPUSD3-215ENST00000475470 GPATCH3Q96I76 525 aa18.77■□□□□ 0.6
RPUSD3-215ENST00000475470 TEX13AQ9BXU3 409 aaPredicted RBP18.77■□□□□ 0.6
RPUSD3-215ENST00000475470 USP42Q9H9J4 1324 aaKnown RBP18.77■□□□□ 0.6
RPUSD3-215ENST00000475470 VSIG10Q8N0Z9 540 aa18.76■□□□□ 0.59
RPUSD3-215ENST00000475470 SIL1Q9H173 461 aa18.76■□□□□ 0.59
RPUSD3-215ENST00000475470 ATG3Q9NT62 314 aa18.76■□□□□ 0.59
RPUSD3-215ENST00000475470 GLRX3O76003 335 aaKnown RBP18.76■□□□□ 0.59
RPUSD3-215ENST00000475470 CNTROBQ8N137 903 aa18.76■□□□□ 0.59
RPUSD3-215ENST00000475470 ZBTB3Q9H5J0 574 aa18.76■□□□□ 0.59
RPUSD3-215ENST00000475470 PLCH1Q4KWH8 1693 aa18.76■□□□□ 0.59
RPUSD3-215ENST00000475470 FRAT2O75474 233 aaPredicted RBP18.75■□□□□ 0.59
RPUSD3-215ENST00000475470 SASH1O94885 1247 aa18.75■□□□□ 0.59
RPUSD3-215ENST00000475470 AACSQ86V21 672 aa18.75■□□□□ 0.59
RPUSD3-215ENST00000475470 COL15A1P39059 1388 aa18.75■□□□□ 0.59
RPUSD3-215ENST00000475470 CD2BP2O95400 341 aaKnown RBP18.75■□□□□ 0.59
RPUSD3-215ENST00000475470 KLHDC4Q8TBB5 520 aa18.75■□□□□ 0.59
RPUSD3-215ENST00000475470 ECHDC1Q9NTX5 307 aa18.75■□□□□ 0.59
RPUSD3-215ENST00000475470 CWC25Q9NXE8 425 aaPredicted RBP18.75■□□□□ 0.59
RPUSD3-215ENST00000475470 ITGB4P16144 1822 aa18.74■□□□□ 0.59
RPUSD3-215ENST00000475470 K7ELQ4 463 aaPredicted RBP18.74■□□□□ 0.59
RPUSD3-215ENST00000475470 PIP4K2BP78356 416 aa18.74■□□□□ 0.59
RPUSD3-215ENST00000475470 TOM1O60784 492 aa18.74■□□□□ 0.59
RPUSD3-215ENST00000475470 RABL6Q3YEC7 729 aaPredicted RBP18.74■□□□□ 0.59
RPUSD3-215ENST00000475470 DNAJC10Q8IXB1 793 aa18.74■□□□□ 0.59
RPUSD3-215ENST00000475470 ZNF330Q9Y3S2 320 aaPredicted RBP18.74■□□□□ 0.59
RPUSD3-215ENST00000475470 AK9Q5TCS8 1911 aa18.74■□□□□ 0.59
RPUSD3-215ENST00000475470 STARD3NLO95772 234 aa18.73■□□□□ 0.59
RPUSD3-215ENST00000475470 CASP7P55210 303 aa18.73■□□□□ 0.59
RPUSD3-215ENST00000475470 CDCA7Q9BWT1 371 aaPredicted RBP18.73■□□□□ 0.59
RPUSD3-215ENST00000475470 ANO2Q9NQ90 1003 aa18.73■□□□□ 0.59
RPUSD3-215ENST00000475470 CHMP5Q9NZZ3 219 aa18.73■□□□□ 0.59
RPUSD3-215ENST00000475470 NUP188Q5SRE5 1749 aa18.73■□□□□ 0.59
RPUSD3-215ENST00000475470 NUTM2BA6NNL0 878 aaPredicted RBP18.73■□□□□ 0.59
RPUSD3-215ENST00000475470 NUTM2EB1AL46 878 aaPredicted RBP18.73■□□□□ 0.59
RPUSD3-215ENST00000475470 H7C1W4 665 aa18.73■□□□□ 0.59
RPUSD3-215ENST00000475470 HSP90AA1P07900 732 aaKnown RBP18.73■□□□□ 0.59
RPUSD3-215ENST00000475470 NUTM2AQ8IVF1 878 aaPredicted RBP18.73■□□□□ 0.59
RPUSD3-215ENST00000475470 SYTL4Q96C24 671 aaPredicted RBP18.73■□□□□ 0.59
RPUSD3-215ENST00000475470 COPRSQ9NQ92 184 aa18.73■□□□□ 0.59
RPUSD3-215ENST00000475470 BCL9O00512 1426 aa18.72■□□□□ 0.59
RPUSD3-215ENST00000475470 MCCP23508 829 aa18.72■□□□□ 0.59
RPUSD3-215ENST00000475470 CCDC191Q8NCU4 936 aa18.72■□□□□ 0.59
RPUSD3-215ENST00000475470 EAF2Q96CJ1 260 aaPredicted RBP18.72■□□□□ 0.59
RPUSD3-215ENST00000475470 KAT6BQ8WYB5 2073 aa18.72■□□□□ 0.59
RPUSD3-215ENST00000475470 RFX5P48382 616 aaPredicted RBP18.71■□□□□ 0.59
RPUSD3-215ENST00000475470 THRAP3Q9Y2W1 955 aaKnown RBP18.71■□□□□ 0.59
RPUSD3-215ENST00000475470 SPATA31A1Q5TZJ5 1347 aa18.71■□□□□ 0.59
RPUSD3-215ENST00000475470 LRP6O75581 1613 aa18.71■□□□□ 0.59
RPUSD3-215ENST00000475470 WNK3Q9BYP7 1800 aa18.71■□□□□ 0.59
RPUSD3-215ENST00000475470 CCDC8Q9H0W5 538 aaPredicted RBP18.71■□□□□ 0.59
RPUSD3-215ENST00000475470 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.71■□□□□ 0.59
RPUSD3-215ENST00000475470 PTPN12Q05209 780 aaKnown RBP18.7■□□□□ 0.58
RPUSD3-215ENST00000475470 LMBR1LQ6UX01 489 aa18.7■□□□□ 0.58
RPUSD3-215ENST00000475470 KIF6Q6ZMV9 814 aa18.7■□□□□ 0.58
RPUSD3-215ENST00000475470 ST18O60284 1047 aa18.69■□□□□ 0.58
RPUSD3-215ENST00000475470 DDB1Q16531 1140 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms