RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 TPTE2Q6XPS3 522 aa16.5■□□□□ 0.23
TTC38-206ENST00000475467 RSPH6AQ9H0K4 717 aa16.5■□□□□ 0.23
TTC38-206ENST00000475467 TIAM2Q8IVF5 1701 aa16.49■□□□□ 0.23
TTC38-206ENST00000475467 ANKRD31Q8N7Z5 1873 aa16.48■□□□□ 0.23
TTC38-206ENST00000475467 KLRG2A4D1S0 409 aaPredicted RBP16.48■□□□□ 0.23
TTC38-206ENST00000475467 NEFMP07197 916 aa16.48■□□□□ 0.23
TTC38-206ENST00000475467 NPR1P16066 1061 aa16.48■□□□□ 0.23
TTC38-206ENST00000475467 NBPF5PQ86XG9 351 aaPredicted RBP16.48■□□□□ 0.23
TTC38-206ENST00000475467 POTECB2RU33 542 aa16.47■□□□□ 0.23
TTC38-206ENST00000475467 ALDH1B1P30837 517 aa16.47■□□□□ 0.23
TTC38-206ENST00000475467 HTRA3P83110 453 aa16.47■□□□□ 0.23
TTC38-206ENST00000475467 CCDC93Q567U6 631 aa16.47■□□□□ 0.23
TTC38-206ENST00000475467 CHADLQ6NUI6 762 aa16.47■□□□□ 0.23
TTC38-206ENST00000475467 PRPF40BQ6NWY9 871 aaKnown RBP16.47■□□□□ 0.23
TTC38-206ENST00000475467 RTKN2Q8IZC4 609 aa16.47■□□□□ 0.23
TTC38-206ENST00000475467 PHACTR3Q96KR7 559 aa16.47■□□□□ 0.23
TTC38-206ENST00000475467 CREBZFQ9NS37 354 aa16.47■□□□□ 0.23
TTC38-206ENST00000475467 GRIPAP1Q4V328 841 aa16.46■□□□□ 0.23
TTC38-206ENST00000475467 PNISRQ8TF01 805 aaKnown RBP16.46■□□□□ 0.23
TTC38-206ENST00000475467 L3MBTL3Q96JM7 780 aaPredicted RBP16.46■□□□□ 0.23
TTC38-206ENST00000475467 USP16Q9Y5T5 823 aa16.46■□□□□ 0.23
TTC38-206ENST00000475467 U2AF1L5P0DN76 240 aaPredicted RBP16.45■□□□□ 0.22
TTC38-206ENST00000475467 U2AF1Q01081 240 aaKnown RBP eCLIP16.45■□□□□ 0.22
TTC38-206ENST00000475467 CC2D2BQ6DHV5 1058 aa16.45■□□□□ 0.22
TTC38-206ENST00000475467 ARFGEF2Q9Y6D5 1785 aa16.45■□□□□ 0.22
TTC38-206ENST00000475467 BCORQ6W2J9 1755 aa16.44■□□□□ 0.22
TTC38-206ENST00000475467 TAF7Q15545 349 aaPredicted RBP16.44■□□□□ 0.22
TTC38-206ENST00000475467 COL13A1Q5TAT6 717 aaPredicted RBP16.44■□□□□ 0.22
TTC38-206ENST00000475467 LDHDQ86WU2 507 aa16.44■□□□□ 0.22
TTC38-206ENST00000475467 TNS4Q8IZW8 715 aa16.44■□□□□ 0.22
TTC38-206ENST00000475467 C7orf43Q8WVR3 580 aa16.44■□□□□ 0.22
TTC38-206ENST00000475467 SCN4AP35499 1836 aa16.43■□□□□ 0.22
TTC38-206ENST00000475467 KCNQ3O43525 872 aa16.43■□□□□ 0.22
TTC38-206ENST00000475467 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
TTC38-206ENST00000475467 NYXQ9GZU5 481 aa16.43■□□□□ 0.22
TTC38-206ENST00000475467 PNNQ9H307 717 aaKnown RBP16.43■□□□□ 0.22
TTC38-206ENST00000475467 NIP7Q9Y221 180 aaKnown RBP eCLIP16.43■□□□□ 0.22
TTC38-206ENST00000475467 SLX4Q8IY92 1834 aa16.42■□□□□ 0.22
TTC38-206ENST00000475467 ERVV-1B6SEH8 477 aa16.42■□□□□ 0.22
TTC38-206ENST00000475467 HSPA1AP0DMV8 641 aaKnown RBP16.42■□□□□ 0.22
TTC38-206ENST00000475467 HSPA1BP0DMV9 641 aaKnown RBP16.42■□□□□ 0.22
TTC38-206ENST00000475467 ZNF219Q9P2Y4 722 aaPredicted RBP16.42■□□□□ 0.22
TTC38-206ENST00000475467 COL11A2P13942 1736 aaPredicted RBP16.42■□□□□ 0.22
TTC38-206ENST00000475467 DDNO94850 711 aaPredicted RBP16.41■□□□□ 0.22
TTC38-206ENST00000475467 GTF2E1P29083 439 aaPredicted RBP16.41■□□□□ 0.22
TTC38-206ENST00000475467 PPP2R1AP30153 589 aa16.41■□□□□ 0.22
TTC38-206ENST00000475467 PNMA8AQ86V59 439 aaPredicted RBP16.41■□□□□ 0.22
TTC38-206ENST00000475467 CCDC24Q8N4L8 307 aa16.4■□□□□ 0.22
TTC38-206ENST00000475467 MCM10Q7L590 875 aa16.39■□□□□ 0.21
TTC38-206ENST00000475467 PSMD1Q99460 953 aa16.39■□□□□ 0.21
TTC38-206ENST00000475467 TAF1DQ9H5J8 278 aaPredicted RBP16.39■□□□□ 0.21
TTC38-206ENST00000475467 NBPF26B4DH59 902 aa16.38■□□□□ 0.21
TTC38-206ENST00000475467 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
TTC38-206ENST00000475467 NBPF10Q6P3W6 841 aaKnown RBP16.38■□□□□ 0.21
TTC38-206ENST00000475467 NBPF15Q8N660 670 aa16.38■□□□□ 0.21
TTC38-206ENST00000475467 JDP2Q8WYK2 163 aa16.38■□□□□ 0.21
TTC38-206ENST00000475467 HACL1Q9UJ83 578 aa16.38■□□□□ 0.21
TTC38-206ENST00000475467 PASKQ96RG2 1323 aa16.38■□□□□ 0.21
TTC38-206ENST00000475467 IBTKQ9P2D0 1353 aaPredicted RBP16.38■□□□□ 0.21
TTC38-206ENST00000475467 FZD9O00144 591 aa16.37■□□□□ 0.21
TTC38-206ENST00000475467 CRY2Q49AN0 593 aa16.37■□□□□ 0.21
TTC38-206ENST00000475467 ERBB4Q15303 1308 aa16.37■□□□□ 0.21
TTC38-206ENST00000475467 RIC1Q4ADV7 1423 aa16.36■□□□□ 0.21
TTC38-206ENST00000475467 TMEM88BA6NKF7 163 aa16.36■□□□□ 0.21
TTC38-206ENST00000475467 IARSP41252 1262 aaKnown RBP16.36■□□□□ 0.21
TTC38-206ENST00000475467 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
TTC38-206ENST00000475467 GPC2Q8N158 579 aa16.36■□□□□ 0.21
TTC38-206ENST00000475467 VPS33BQ9H267 617 aa16.36■□□□□ 0.21
TTC38-206ENST00000475467 CNTNAP1P78357 1384 aa16.36■□□□□ 0.21
TTC38-206ENST00000475467 PRAMEF22A3QJZ6 481 aa16.35■□□□□ 0.21
TTC38-206ENST00000475467 HOXA10P31260 410 aaPredicted RBP16.35■□□□□ 0.21
TTC38-206ENST00000475467 TMX4Q9H1E5 349 aaPredicted RBP16.35■□□□□ 0.21
TTC38-206ENST00000475467 PRDM10Q9NQV6 1147 aa16.35■□□□□ 0.21
TTC38-206ENST00000475467 CACNA1SQ13698 1873 aa16.34■□□□□ 0.21
TTC38-206ENST00000475467 EPHX2P34913 555 aa16.34■□□□□ 0.21
TTC38-206ENST00000475467 PIP4K2AP48426 406 aaPredicted RBP16.34■□□□□ 0.21
TTC38-206ENST00000475467 EIF6P56537 245 aaKnown RBP16.34■□□□□ 0.21
TTC38-206ENST00000475467 SYNE4Q8N205 404 aa16.34■□□□□ 0.21
TTC38-206ENST00000475467 BABAM1Q9NWV8 329 aa16.34■□□□□ 0.21
TTC38-206ENST00000475467 MAP3K15Q6ZN16 1313 aa16.34■□□□□ 0.21
TTC38-206ENST00000475467 PCNTO95613 3336 aa16.34■□□□□ 0.21
TTC38-206ENST00000475467 ITGBL1O95965 494 aaPredicted RBP16.33■□□□□ 0.2
TTC38-206ENST00000475467 DCTN1Q14203 1278 aa16.33■□□□□ 0.2
TTC38-206ENST00000475467 RPGRQ92834 1020 aaKnown RBP16.33■□□□□ 0.2
TTC38-206ENST00000475467 AIDAQ96BJ3 306 aa16.33■□□□□ 0.2
TTC38-206ENST00000475467 CRAMP1Q96RY5 1269 aa16.33■□□□□ 0.2
TTC38-206ENST00000475467 ZNF277Q9NRM2 450 aaPredicted RBP16.33■□□□□ 0.2
TTC38-206ENST00000475467 LAMB4A4D0S4 1761 aa16.33■□□□□ 0.2
TTC38-206ENST00000475467 EIF4A1P60842 406 aaKnown RBP16.32■□□□□ 0.2
TTC38-206ENST00000475467 HLFQ16534 295 aa16.32■□□□□ 0.2
TTC38-206ENST00000475467 PARP10Q53GL7 1025 aa16.32■□□□□ 0.2
TTC38-206ENST00000475467 PPP1R42Q7Z4L9 355 aa16.32■□□□□ 0.2
TTC38-206ENST00000475467 MKRN1Q9UHC7 482 aaKnown RBP16.32■□□□□ 0.2
TTC38-206ENST00000475467 CLEC11AQ9Y240 323 aa16.32■□□□□ 0.2
TTC38-206ENST00000475467 RNF123Q5XPI4 1314 aa16.31■□□□□ 0.2
TTC38-206ENST00000475467 POTEIP0CG38 1075 aa16.31■□□□□ 0.2
TTC38-206ENST00000475467 POTEJP0CG39 1038 aa16.31■□□□□ 0.2
TTC38-206ENST00000475467 LMOD1P29536 600 aaPredicted RBP16.31■□□□□ 0.2
TTC38-206ENST00000475467 CTCFP49711 727 aaPredicted RBP16.31■□□□□ 0.2
TTC38-206ENST00000475467 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms