RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 SNRPA1P09661 255 aaKnown RBP33.24■■■□□ 2.91
TMEM54-205ENST00000475208 FER1L6Q2WGJ9 1857 aa33.24■■■□□ 2.91
TMEM54-205ENST00000475208 DCTN1Q14203 1278 aa33.22■■■□□ 2.91
TMEM54-205ENST00000475208 STYK1Q6J9G0 422 aa33.22■■■□□ 2.91
TMEM54-205ENST00000475208 CNKSR1Q969H4 720 aa33.22■■■□□ 2.91
TMEM54-205ENST00000475208 SRGNP10124 158 aa33.21■■■□□ 2.91
TMEM54-205ENST00000475208 ERFEQ4G0M1 354 aa33.21■■■□□ 2.91
TMEM54-205ENST00000475208 DPY19L2Q6NUT2 758 aa33.2■■■□□ 2.91
TMEM54-205ENST00000475208 PRPF40BQ6NWY9 871 aaKnown RBP33.2■■■□□ 2.91
TMEM54-205ENST00000475208 JMYQ8N9B5 988 aa33.2■■■□□ 2.91
TMEM54-205ENST00000475208 TAOK3Q9H2K8 898 aa33.2■■■□□ 2.91
TMEM54-205ENST00000475208 CACNA1SQ13698 1873 aa33.2■■■□□ 2.9
TMEM54-205ENST00000475208 DICER1Q9UPY3 1922 aaKnown RBP33.2■■■□□ 2.9
TMEM54-205ENST00000475208 SLX4Q8IY92 1834 aa33.19■■■□□ 2.9
TMEM54-205ENST00000475208 CLEC4GQ6UXB4 293 aa33.19■■■□□ 2.9
TMEM54-205ENST00000475208 MASTLQ96GX5 879 aa33.19■■■□□ 2.9
TMEM54-205ENST00000475208 ZNF652Q9Y2D9 606 aa33.19■■■□□ 2.9
TMEM54-205ENST00000475208 LTBP3Q9NS15 1303 aa33.19■■■□□ 2.9
TMEM54-205ENST00000475208 HTATSF1O43719 755 aaKnown RBP33.18■■■□□ 2.9
TMEM54-205ENST00000475208 NBPF5PQ86XG9 351 aaPredicted RBP33.18■■■□□ 2.9
TMEM54-205ENST00000475208 ARFGEF2Q9Y6D5 1785 aa33.18■■■□□ 2.9
TMEM54-205ENST00000475208 POTECB2RU33 542 aa33.17■■■□□ 2.9
TMEM54-205ENST00000475208 NBPF26B4DH59 902 aa33.15■■■□□ 2.9
TMEM54-205ENST00000475208 NBPF10Q6P3W6 841 aaKnown RBP33.15■■■□□ 2.9
TMEM54-205ENST00000475208 NBPF15Q8N660 670 aa33.15■■■□□ 2.9
TMEM54-205ENST00000475208 SOGA3Q5TF21 947 aa33.14■■■□□ 2.9
TMEM54-205ENST00000475208 TAF7Q15545 349 aaPredicted RBP33.12■■■□□ 2.89
TMEM54-205ENST00000475208 NIP7Q9Y221 180 aaKnown RBP eCLIP33.12■■■□□ 2.89
TMEM54-205ENST00000475208 RGL2O15211 777 aa33.1■■■□□ 2.89
TMEM54-205ENST00000475208 LAMB4A4D0S4 1761 aa33.1■■■□□ 2.89
TMEM54-205ENST00000475208 MIS18AQ9NYP9 233 aa33.09■■■□□ 2.89
TMEM54-205ENST00000475208 NPR1P16066 1061 aa33.08■■■□□ 2.89
TMEM54-205ENST00000475208 TPTE2Q6XPS3 522 aa33.08■■■□□ 2.89
TMEM54-205ENST00000475208 FAM177BA6PVY3 158 aa33.07■■■□□ 2.88
TMEM54-205ENST00000475208 DDNO94850 711 aaPredicted RBP33.07■■■□□ 2.88
TMEM54-205ENST00000475208 CCDC93Q567U6 631 aa33.07■■■□□ 2.88
TMEM54-205ENST00000475208 C7orf43Q8WVR3 580 aa33.07■■■□□ 2.88
TMEM54-205ENST00000475208 KLRG2A4D1S0 409 aaPredicted RBP33.06■■■□□ 2.88
TMEM54-205ENST00000475208 NEFMP07197 916 aa33.06■■■□□ 2.88
TMEM54-205ENST00000475208 HLFQ16534 295 aa33.05■■■□□ 2.88
TMEM54-205ENST00000475208 DLG5Q8TDM6 1919 aa33.04■■■□□ 2.88
TMEM54-205ENST00000475208 KDM3BQ7LBC6 1761 aa33.04■■■□□ 2.88
TMEM54-205ENST00000475208 PNISRQ8TF01 805 aaKnown RBP33.02■■■□□ 2.88
TMEM54-205ENST00000475208 PCNTO95613 3336 aa33.02■■■□□ 2.88
TMEM54-205ENST00000475208 CHADLQ6NUI6 762 aa33.01■■■□□ 2.87
TMEM54-205ENST00000475208 FKBP4Q02790 459 aaKnown RBP eCLIP33■■■□□ 2.87
TMEM54-205ENST00000475208 COL13A1Q5TAT6 717 aaPredicted RBP33■■■□□ 2.87
TMEM54-205ENST00000475208 NGEFQ8N5V2 710 aa33■■■□□ 2.87
TMEM54-205ENST00000475208 POTEIP0CG38 1075 aa32.99■■■□□ 2.87
TMEM54-205ENST00000475208 POTEJP0CG39 1038 aa32.99■■■□□ 2.87
TMEM54-205ENST00000475208 GTF2E1P29083 439 aaPredicted RBP32.99■■■□□ 2.87
TMEM54-205ENST00000475208 OLFM4Q6UX06 510 aa32.99■■■□□ 2.87
TMEM54-205ENST00000475208 PLEKHF1Q96S99 279 aa32.99■■■□□ 2.87
TMEM54-205ENST00000475208 ZNF277Q9NRM2 450 aaPredicted RBP32.98■■■□□ 2.87
TMEM54-205ENST00000475208 NFE2L2Q16236 605 aa32.97■■■□□ 2.87
TMEM54-205ENST00000475208 THUMPD2Q9BTF0 503 aaKnown RBP32.97■■■□□ 2.87
TMEM54-205ENST00000475208 ABCC12Q96J65 1359 aa32.96■■■□□ 2.87
TMEM54-205ENST00000475208 IQCA1LA6NCM1 817 aa32.96■■■□□ 2.87
TMEM54-205ENST00000475208 EIF4A1P60842 406 aaKnown RBP32.96■■■□□ 2.87
TMEM54-205ENST00000475208 L3MBTL3Q96JM7 780 aaPredicted RBP32.96■■■□□ 2.87
TMEM54-205ENST00000475208 ERVV-1B6SEH8 477 aa32.95■■■□□ 2.87
TMEM54-205ENST00000475208 RTKN2Q8IZC4 609 aa32.95■■■□□ 2.87
TMEM54-205ENST00000475208 NYXQ9GZU5 481 aa32.95■■■□□ 2.87
TMEM54-205ENST00000475208 RRP7AQ9Y3A4 280 aaKnown RBP32.95■■■□□ 2.87
TMEM54-205ENST00000475208 MAP3K15Q6ZN16 1313 aa32.95■■■□□ 2.86
TMEM54-205ENST00000475208 ALDH1B1P30837 517 aa32.94■■■□□ 2.86
TMEM54-205ENST00000475208 ZNF541Q9H0D2 1346 aa32.94■■■□□ 2.86
TMEM54-205ENST00000475208 SCN4AP35499 1836 aa32.93■■■□□ 2.86
TMEM54-205ENST00000475208 HSPA1AP0DMV8 641 aaKnown RBP32.93■■■□□ 2.86
TMEM54-205ENST00000475208 HSPA1BP0DMV9 641 aaKnown RBP32.93■■■□□ 2.86
TMEM54-205ENST00000475208 KIF6Q6ZMV9 814 aa32.93■■■□□ 2.86
TMEM54-205ENST00000475208 TTLL7Q6ZT98 887 aa32.93■■■□□ 2.86
TMEM54-205ENST00000475208 NUTM1Q86Y26 1132 aa32.93■■■□□ 2.86
TMEM54-205ENST00000475208 NUP98P52948 1817 aa32.93■■■□□ 2.86
TMEM54-205ENST00000475208 TAF1DQ9H5J8 278 aaPredicted RBP32.92■■■□□ 2.86
TMEM54-205ENST00000475208 CREBZFQ9NS37 354 aa32.92■■■□□ 2.86
TMEM54-205ENST00000475208 MAPK8IP3Q9UPT6 1336 aa32.92■■■□□ 2.86
TMEM54-205ENST00000475208 MYL6BP14649 208 aa32.91■■■□□ 2.86
TMEM54-205ENST00000475208 CRY2Q49AN0 593 aa32.91■■■□□ 2.86
TMEM54-205ENST00000475208 LDHDQ86WU2 507 aa32.91■■■□□ 2.86
TMEM54-205ENST00000475208 IARSP41252 1262 aaKnown RBP32.89■■■□□ 2.86
TMEM54-205ENST00000475208 SYNE4Q8N205 404 aa32.89■■■□□ 2.86
TMEM54-205ENST00000475208 PNNQ9H307 717 aaKnown RBP32.89■■■□□ 2.86
TMEM54-205ENST00000475208 ZBTB3Q9H5J0 574 aa32.89■■■□□ 2.86
TMEM54-205ENST00000475208 GPTP24298 496 aa32.88■■■□□ 2.85
TMEM54-205ENST00000475208 SNED1Q8TER0 1413 aa32.87■■■□□ 2.85
TMEM54-205ENST00000475208 IBTKQ9P2D0 1353 aaPredicted RBP32.87■■■□□ 2.85
TMEM54-205ENST00000475208 UBN2Q6ZU65 1347 aa32.87■■■□□ 2.85
TMEM54-205ENST00000475208 MKRN1Q9UHC7 482 aaKnown RBP32.87■■■□□ 2.85
TMEM54-205ENST00000475208 RIC1Q4ADV7 1423 aa32.86■■■□□ 2.85
TMEM54-205ENST00000475208 TNS4Q8IZW8 715 aa32.86■■■□□ 2.85
TMEM54-205ENST00000475208 PASKQ96RG2 1323 aa32.85■■■□□ 2.85
TMEM54-205ENST00000475208 HACL1Q9UJ83 578 aa32.85■■■□□ 2.85
TMEM54-205ENST00000475208 ERBB4Q15303 1308 aa32.84■■■□□ 2.85
TMEM54-205ENST00000475208 FZD9O00144 591 aa32.84■■■□□ 2.85
TMEM54-205ENST00000475208 EAPPQ56P03 285 aaPredicted RBP32.84■■■□□ 2.85
TMEM54-205ENST00000475208 SUSD4Q5VX71 490 aa32.84■■■□□ 2.85
TMEM54-205ENST00000475208 RPGRQ92834 1020 aaKnown RBP32.84■■■□□ 2.85
TMEM54-205ENST00000475208 PSMD1Q99460 953 aa32.84■■■□□ 2.85
TMEM54-205ENST00000475208 TSPYL4Q9UJ04 414 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms