RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 GNAT3A8MTJ3 354 aa21.48■■□□□ 1.03
ITGB1-211ENST00000475184 IL17REQ8NFR9 667 aa21.48■■□□□ 1.03
ITGB1-211ENST00000475184 MASTLQ96GX5 879 aa21.48■■□□□ 1.03
ITGB1-211ENST00000475184 PCGF6Q9BYE7 350 aa21.48■■□□□ 1.03
ITGB1-211ENST00000475184 COL3A1P02461 1466 aaPredicted RBP21.47■■□□□ 1.03
ITGB1-211ENST00000475184 FOXN1O15353 648 aa21.47■■□□□ 1.03
ITGB1-211ENST00000475184 A1BGP04217 495 aa21.47■■□□□ 1.03
ITGB1-211ENST00000475184 LDHDQ86WU2 507 aa21.47■■□□□ 1.03
ITGB1-211ENST00000475184 FMNL2Q96PY5 1086 aa21.47■■□□□ 1.03
ITGB1-211ENST00000475184 PASKQ96RG2 1323 aa21.47■■□□□ 1.03
ITGB1-211ENST00000475184 GAS2L2Q8NHY3 880 aa21.46■■□□□ 1.03
ITGB1-211ENST00000475184 L3MBTL3Q96JM7 780 aaPredicted RBP21.46■■□□□ 1.03
ITGB1-211ENST00000475184 TAF1DQ9H5J8 278 aaPredicted RBP21.45■■□□□ 1.02
ITGB1-211ENST00000475184 ADAMTSL1Q8N6G6 1762 aa21.44■■□□□ 1.02
ITGB1-211ENST00000475184 DZIP3Q86Y13 1208 aaKnown RBP21.44■■□□□ 1.02
ITGB1-211ENST00000475184 PRDM10Q9NQV6 1147 aa21.44■■□□□ 1.02
ITGB1-211ENST00000475184 CCDC93Q567U6 631 aa21.43■■□□□ 1.02
ITGB1-211ENST00000475184 CC2D1BQ5T0F9 858 aaKnown RBP21.43■■□□□ 1.02
ITGB1-211ENST00000475184 C7orf43Q8WVR3 580 aa21.43■■□□□ 1.02
ITGB1-211ENST00000475184 KIF7Q2M1P5 1343 aa21.43■■□□□ 1.02
ITGB1-211ENST00000475184 CEMIPQ8WUJ3 1361 aa21.43■■□□□ 1.02
ITGB1-211ENST00000475184 U2SURPO15042 1029 aaKnown RBP21.42■■□□□ 1.02
ITGB1-211ENST00000475184 NBPF5PQ86XG9 351 aaPredicted RBP21.42■■□□□ 1.02
ITGB1-211ENST00000475184 AIDAQ96BJ3 306 aa21.42■■□□□ 1.02
ITGB1-211ENST00000475184 TMEM88BA6NKF7 163 aa21.41■■□□□ 1.02
ITGB1-211ENST00000475184 CTCFP49711 727 aaPredicted RBP21.41■■□□□ 1.02
ITGB1-211ENST00000475184 VEGFBP49765 207 aa21.41■■□□□ 1.02
ITGB1-211ENST00000475184 ZNF541Q9H0D2 1346 aa21.4■■□□□ 1.02
ITGB1-211ENST00000475184 PER1O15534 1290 aaPredicted RBP21.4■■□□□ 1.02
ITGB1-211ENST00000475184 KCNQ3O43525 872 aa21.4■■□□□ 1.02
ITGB1-211ENST00000475184 ITGBL1O95965 494 aaPredicted RBP21.4■■□□□ 1.02
ITGB1-211ENST00000475184 EAPPQ56P03 285 aaPredicted RBP21.4■■□□□ 1.02
ITGB1-211ENST00000475184 BTBD11A6QL63 1104 aa21.39■■□□□ 1.01
ITGB1-211ENST00000475184 NPR1P16066 1061 aa21.39■■□□□ 1.01
ITGB1-211ENST00000475184 PIP4K2AP48426 406 aaPredicted RBP21.39■■□□□ 1.01
ITGB1-211ENST00000475184 FKBP4Q02790 459 aaKnown RBP eCLIP21.39■■□□□ 1.01
ITGB1-211ENST00000475184 CLEC4GQ6UXB4 293 aa21.39■■□□□ 1.01
ITGB1-211ENST00000475184 ZNF277Q9NRM2 450 aaPredicted RBP21.39■■□□□ 1.01
ITGB1-211ENST00000475184 HACL1Q9UJ83 578 aa21.39■■□□□ 1.01
ITGB1-211ENST00000475184 ZNF652Q9Y2D9 606 aa21.39■■□□□ 1.01
ITGB1-211ENST00000475184 CLEC11AQ9Y240 323 aa21.37■■□□□ 1.01
ITGB1-211ENST00000475184 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
ITGB1-211ENST00000475184 KLRG2A4D1S0 409 aaPredicted RBP21.36■■□□□ 1.01
ITGB1-211ENST00000475184 EPHX2P34913 555 aa21.36■■□□□ 1.01
ITGB1-211ENST00000475184 OLFM4Q6UX06 510 aa21.36■■□□□ 1.01
ITGB1-211ENST00000475184 WBP1LQ9NX94 342 aa21.36■■□□□ 1.01
ITGB1-211ENST00000475184 RTKN2Q8IZC4 609 aa21.35■■□□□ 1.01
ITGB1-211ENST00000475184 NPC1L1Q9UHC9 1359 aa21.35■■□□□ 1.01
ITGB1-211ENST00000475184 RNF123Q5XPI4 1314 aa21.34■■□□□ 1.01
ITGB1-211ENST00000475184 PRAMEF22A3QJZ6 481 aa21.34■■□□□ 1.01
ITGB1-211ENST00000475184 LBX1P52954 281 aa21.34■■□□□ 1.01
ITGB1-211ENST00000475184 TPTE2Q6XPS3 522 aa21.34■■□□□ 1.01
ITGB1-211ENST00000475184 PNMA8AQ86V59 439 aaPredicted RBP21.34■■□□□ 1.01
ITGB1-211ENST00000475184 PHACTR3Q96KR7 559 aa21.34■■□□□ 1.01
ITGB1-211ENST00000475184 NIP7Q9Y221 180 aaKnown RBP eCLIP21.34■■□□□ 1.01
ITGB1-211ENST00000475184 LAMB4A4D0S4 1761 aa21.33■■□□□ 1.01
ITGB1-211ENST00000475184 TRPM7Q96QT4 1865 aa21.33■■□□□ 1.01
ITGB1-211ENST00000475184 RASSF10A6NK89 507 aa21.33■■□□□ 1.01
ITGB1-211ENST00000475184 NUP98P52948 1817 aa21.33■■□□□ 1.01
ITGB1-211ENST00000475184 FZD9O00144 591 aa21.32■■□□□ 1
ITGB1-211ENST00000475184 RGL2O15211 777 aa21.32■■□□□ 1
ITGB1-211ENST00000475184 SNRPA1P09661 255 aaKnown RBP21.32■■□□□ 1
ITGB1-211ENST00000475184 PRKAR2BP31323 418 aa21.32■■□□□ 1
ITGB1-211ENST00000475184 IARSP41252 1262 aaKnown RBP21.32■■□□□ 1
ITGB1-211ENST00000475184 MAP1SQ66K74 1059 aaPredicted RBP21.32■■□□□ 1
ITGB1-211ENST00000475184 CNTROBQ8N137 903 aa21.32■■□□□ 1
ITGB1-211ENST00000475184 CNGB1Q14028 1251 aaPredicted RBP21.31■■□□□ 1
ITGB1-211ENST00000475184 DEFB115Q30KQ5 88 aa21.31■■□□□ 1
ITGB1-211ENST00000475184 GPC2Q8N158 579 aa21.31■■□□□ 1
ITGB1-211ENST00000475184 RSPH6AQ9H0K4 717 aa21.31■■□□□ 1
ITGB1-211ENST00000475184 THSD7BQ9C0I4 1608 aa21.3■■□□□ 1
ITGB1-211ENST00000475184 FAM177BA6PVY3 158 aa21.3■■□□□ 1
ITGB1-211ENST00000475184 NBPF26B4DH59 902 aa21.3■■□□□ 1
ITGB1-211ENST00000475184 ALDH1B1P30837 517 aa21.3■■□□□ 1
ITGB1-211ENST00000475184 NBPF10Q6P3W6 841 aaKnown RBP21.3■■□□□ 1
ITGB1-211ENST00000475184 SYNE4Q8N205 404 aa21.3■■□□□ 1
ITGB1-211ENST00000475184 NBPF15Q8N660 670 aa21.3■■□□□ 1
ITGB1-211ENST00000475184 SNED1Q8TER0 1413 aa21.29■■□□□ 1
ITGB1-211ENST00000475184 LTBP1Q14766 1721 aa21.29■■□□□ 1
ITGB1-211ENST00000475184 HSPA8P11142 646 aaKnown RBP21.29■■□□□ 1
ITGB1-211ENST00000475184 MAP2K1Q02750 393 aaPredicted RBP21.28■■□□□ 1
ITGB1-211ENST00000475184 PSMD1Q99460 953 aa21.28■■□□□ 1
ITGB1-211ENST00000475184 ABT1Q9ULW3 272 aaKnown RBP21.28■■□□□ 1
ITGB1-211ENST00000475184 WDR33Q9C0J8 1336 aaKnown RBP21.28■■□□□ 1
ITGB1-211ENST00000475184 GTF2E1P29083 439 aaPredicted RBP21.27■■□□□ 1
ITGB1-211ENST00000475184 MCM10Q7L590 875 aa21.27■■□□□ 1
ITGB1-211ENST00000475184 JDP2Q8WYK2 163 aa21.27■■□□□ 1
ITGB1-211ENST00000475184 RTF1Q92541 710 aaKnown RBP21.27■■□□□ 1
ITGB1-211ENST00000475184 COL4A5P29400 1685 aa21.27■■□□□ 1
ITGB1-211ENST00000475184 HLFQ16534 295 aa21.26■□□□□ 0.99
ITGB1-211ENST00000475184 ABHD8Q96I13 439 aa21.26■□□□□ 0.99
ITGB1-211ENST00000475184 ABCC12Q96J65 1359 aa21.25■□□□□ 0.99
ITGB1-211ENST00000475184 CRY2Q49AN0 593 aa21.25■□□□□ 0.99
ITGB1-211ENST00000475184 CFAP53Q96M91 514 aa21.25■□□□□ 0.99
ITGB1-211ENST00000475184 DDX21Q9NR30 783 aaKnown RBP eCLIP21.25■□□□□ 0.99
ITGB1-211ENST00000475184 DLG5Q8TDM6 1919 aa21.24■□□□□ 0.99
ITGB1-211ENST00000475184 EIF6P56537 245 aaKnown RBP21.24■□□□□ 0.99
ITGB1-211ENST00000475184 CCER1Q8TC90 406 aaPredicted RBP21.24■□□□□ 0.99
ITGB1-211ENST00000475184 GJA3Q9Y6H8 435 aa21.24■□□□□ 0.99
ITGB1-211ENST00000475184 LMOD1P29536 600 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms