RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 STYK1Q6J9G0 422 aa20.88■□□□□ 0.93
SRRT-209ENST00000474896 MCM10Q7L590 875 aa20.88■□□□□ 0.93
SRRT-209ENST00000474896 SCN7AQ01118 1682 aa20.87■□□□□ 0.93
SRRT-209ENST00000474896 SNRPA1P09661 255 aaKnown RBP20.87■□□□□ 0.93
SRRT-209ENST00000474896 SRGNP10124 158 aa20.87■□□□□ 0.93
SRRT-209ENST00000474896 MASTLQ96GX5 879 aa20.87■□□□□ 0.93
SRRT-209ENST00000474896 COL13A1Q5TAT6 717 aaPredicted RBP20.86■□□□□ 0.93
SRRT-209ENST00000474896 CLEC4GQ6UXB4 293 aa20.86■□□□□ 0.93
SRRT-209ENST00000474896 TAOK3Q9H2K8 898 aa20.86■□□□□ 0.93
SRRT-209ENST00000474896 TIAM2Q8IVF5 1701 aa20.86■□□□□ 0.93
SRRT-209ENST00000474896 DCTN1Q14203 1278 aa20.85■□□□□ 0.93
SRRT-209ENST00000474896 PRPF40BQ6NWY9 871 aaKnown RBP20.85■□□□□ 0.93
SRRT-209ENST00000474896 NBPF5PQ86XG9 351 aaPredicted RBP20.85■□□□□ 0.93
SRRT-209ENST00000474896 FER1L6Q2WGJ9 1857 aa20.85■□□□□ 0.93
SRRT-209ENST00000474896 COL11A2P13942 1736 aaPredicted RBP20.84■□□□□ 0.93
SRRT-209ENST00000474896 LTBP3Q9NS15 1303 aa20.84■□□□□ 0.93
SRRT-209ENST00000474896 SLX4Q8IY92 1834 aa20.84■□□□□ 0.93
SRRT-209ENST00000474896 PPP2R1AP30153 589 aa20.84■□□□□ 0.93
SRRT-209ENST00000474896 DICER1Q9UPY3 1922 aaKnown RBP20.83■□□□□ 0.93
SRRT-209ENST00000474896 SOGA3Q5TF21 947 aa20.83■□□□□ 0.93
SRRT-209ENST00000474896 ZNF652Q9Y2D9 606 aa20.83■□□□□ 0.93
SRRT-209ENST00000474896 DDNO94850 711 aaPredicted RBP20.82■□□□□ 0.92
SRRT-209ENST00000474896 NBPF26B4DH59 902 aa20.81■□□□□ 0.92
SRRT-209ENST00000474896 HTATSF1O43719 755 aaKnown RBP20.81■□□□□ 0.92
SRRT-209ENST00000474896 NBPF10Q6P3W6 841 aaKnown RBP20.81■□□□□ 0.92
SRRT-209ENST00000474896 TPTE2Q6XPS3 522 aa20.81■□□□□ 0.92
SRRT-209ENST00000474896 NBPF15Q8N660 670 aa20.81■□□□□ 0.92
SRRT-209ENST00000474896 NPR1P16066 1061 aa20.8■□□□□ 0.92
SRRT-209ENST00000474896 TAF7Q15545 349 aaPredicted RBP20.8■□□□□ 0.92
SRRT-209ENST00000474896 C7orf43Q8WVR3 580 aa20.8■□□□□ 0.92
SRRT-209ENST00000474896 MIS18AQ9NYP9 233 aa20.8■□□□□ 0.92
SRRT-209ENST00000474896 NIP7Q9Y221 180 aaKnown RBP eCLIP20.8■□□□□ 0.92
SRRT-209ENST00000474896 BCORQ6W2J9 1755 aa20.8■□□□□ 0.92
SRRT-209ENST00000474896 CACNA1SQ13698 1873 aa20.79■□□□□ 0.92
SRRT-209ENST00000474896 FAM177BA6PVY3 158 aa20.79■□□□□ 0.92
SRRT-209ENST00000474896 CHADLQ6NUI6 762 aa20.79■□□□□ 0.92
SRRT-209ENST00000474896 KLRG2A4D1S0 409 aaPredicted RBP20.78■□□□□ 0.92
SRRT-209ENST00000474896 POTEIP0CG38 1075 aa20.77■□□□□ 0.92
SRRT-209ENST00000474896 POTEJP0CG39 1038 aa20.77■□□□□ 0.92
SRRT-209ENST00000474896 HLFQ16534 295 aa20.77■□□□□ 0.92
SRRT-209ENST00000474896 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
SRRT-209ENST00000474896 HSPA1AP0DMV8 641 aaKnown RBP20.76■□□□□ 0.91
SRRT-209ENST00000474896 HSPA1BP0DMV9 641 aaKnown RBP20.76■□□□□ 0.91
SRRT-209ENST00000474896 RGL2O15211 777 aa20.75■□□□□ 0.91
SRRT-209ENST00000474896 GTF2E1P29083 439 aaPredicted RBP20.75■□□□□ 0.91
SRRT-209ENST00000474896 OLFM4Q6UX06 510 aa20.75■□□□□ 0.91
SRRT-209ENST00000474896 TNS4Q8IZW8 715 aa20.75■□□□□ 0.91
SRRT-209ENST00000474896 NGEFQ8N5V2 710 aa20.75■□□□□ 0.91
SRRT-209ENST00000474896 FKBP4Q02790 459 aaKnown RBP eCLIP20.74■□□□□ 0.91
SRRT-209ENST00000474896 ZNF277Q9NRM2 450 aaPredicted RBP20.74■□□□□ 0.91
SRRT-209ENST00000474896 ARFGEF2Q9Y6D5 1785 aa20.74■□□□□ 0.91
SRRT-209ENST00000474896 PCNTO95613 3336 aa20.73■□□□□ 0.91
SRRT-209ENST00000474896 IQCA1LA6NCM1 817 aa20.73■□□□□ 0.91
SRRT-209ENST00000474896 ALDH1B1P30837 517 aa20.73■□□□□ 0.91
SRRT-209ENST00000474896 RTKN2Q8IZC4 609 aa20.73■□□□□ 0.91
SRRT-209ENST00000474896 CREBZFQ9NS37 354 aa20.73■□□□□ 0.91
SRRT-209ENST00000474896 CAPN15O75808 1086 aa20.72■□□□□ 0.91
SRRT-209ENST00000474896 NEFMP07197 916 aa20.72■□□□□ 0.91
SRRT-209ENST00000474896 L3MBTL3Q96JM7 780 aaPredicted RBP20.72■□□□□ 0.91
SRRT-209ENST00000474896 TAF1DQ9H5J8 278 aaPredicted RBP20.72■□□□□ 0.91
SRRT-209ENST00000474896 MKRN1Q9UHC7 482 aaKnown RBP20.72■□□□□ 0.91
SRRT-209ENST00000474896 SYNE4Q8N205 404 aa20.71■□□□□ 0.91
SRRT-209ENST00000474896 PNISRQ8TF01 805 aaKnown RBP20.71■□□□□ 0.91
SRRT-209ENST00000474896 LDHDQ86WU2 507 aa20.7■□□□□ 0.9
SRRT-209ENST00000474896 RRP7AQ9Y3A4 280 aaKnown RBP20.7■□□□□ 0.9
SRRT-209ENST00000474896 ERVV-1B6SEH8 477 aa20.69■□□□□ 0.9
SRRT-209ENST00000474896 NUTM1Q86Y26 1132 aa20.69■□□□□ 0.9
SRRT-209ENST00000474896 ZNF541Q9H0D2 1346 aa20.69■□□□□ 0.9
SRRT-209ENST00000474896 IARSP41252 1262 aaKnown RBP20.68■□□□□ 0.9
SRRT-209ENST00000474896 EIF4A1P60842 406 aaKnown RBP20.68■□□□□ 0.9
SRRT-209ENST00000474896 EAPPQ56P03 285 aaPredicted RBP20.68■□□□□ 0.9
SRRT-209ENST00000474896 NYXQ9GZU5 481 aa20.68■□□□□ 0.9
SRRT-209ENST00000474896 HACL1Q9UJ83 578 aa20.68■□□□□ 0.9
SRRT-209ENST00000474896 SCN4AP35499 1836 aa20.67■□□□□ 0.9
SRRT-209ENST00000474896 MYL6BP14649 208 aa20.67■□□□□ 0.9
SRRT-209ENST00000474896 TTLL7Q6ZT98 887 aa20.67■□□□□ 0.9
SRRT-209ENST00000474896 PLEKHF1Q96S99 279 aa20.67■□□□□ 0.9
SRRT-209ENST00000474896 THUMPD2Q9BTF0 503 aaKnown RBP20.67■□□□□ 0.9
SRRT-209ENST00000474896 CLEC11AQ9Y240 323 aa20.67■□□□□ 0.9
SRRT-209ENST00000474896 MAP3K15Q6ZN16 1313 aa20.67■□□□□ 0.9
SRRT-209ENST00000474896 PASKQ96RG2 1323 aa20.67■□□□□ 0.9
SRRT-209ENST00000474896 FZD9O00144 591 aa20.66■□□□□ 0.9
SRRT-209ENST00000474896 CRY2Q49AN0 593 aa20.66■□□□□ 0.9
SRRT-209ENST00000474896 KIF6Q6ZMV9 814 aa20.66■□□□□ 0.9
SRRT-209ENST00000474896 ITGBL1O95965 494 aaPredicted RBP20.65■□□□□ 0.9
SRRT-209ENST00000474896 GPTP24298 496 aa20.65■□□□□ 0.9
SRRT-209ENST00000474896 EPHX2P34913 555 aa20.65■□□□□ 0.9
SRRT-209ENST00000474896 NFE2L2Q16236 605 aa20.65■□□□□ 0.9
SRRT-209ENST00000474896 DLG5Q8TDM6 1919 aa20.65■□□□□ 0.9
SRRT-209ENST00000474896 JDP2Q8WYK2 163 aa20.64■□□□□ 0.89
SRRT-209ENST00000474896 PSMD1Q99460 953 aa20.64■□□□□ 0.89
SRRT-209ENST00000474896 ZBTB3Q9H5J0 574 aa20.64■□□□□ 0.89
SRRT-209ENST00000474896 ABCC12Q96J65 1359 aa20.63■□□□□ 0.89
SRRT-209ENST00000474896 NUP98P52948 1817 aa20.63■□□□□ 0.89
SRRT-209ENST00000474896 TMEM88BA6NKF7 163 aa20.63■□□□□ 0.89
SRRT-209ENST00000474896 SUSD4Q5VX71 490 aa20.63■□□□□ 0.89
SRRT-209ENST00000474896 RPGRQ92834 1020 aaKnown RBP20.63■□□□□ 0.89
SRRT-209ENST00000474896 LAMB4A4D0S4 1761 aa20.62■□□□□ 0.89
SRRT-209ENST00000474896 CNTNAP1P78357 1384 aa20.62■□□□□ 0.89
SRRT-209ENST00000474896 RNF123Q5XPI4 1314 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms