RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 INTS5Q6P9B9 1019 aaKnown RBP25.49■■□□□ 1.67
EDEM3-206ENST00000474725 MYD88Q99836 296 aa25.49■■□□□ 1.67
EDEM3-206ENST00000474725 CRKLP46109 303 aaKnown RBP25.48■■□□□ 1.67
EDEM3-206ENST00000474725 CCDC87Q9NVE4 849 aa25.48■■□□□ 1.67
EDEM3-206ENST00000474725 IGKV5-2P06315 115 aa25.47■■□□□ 1.67
EDEM3-206ENST00000474725 KCNQ4P56696 695 aa25.47■■□□□ 1.67
EDEM3-206ENST00000474725 NEXNQ0ZGT2 675 aa25.47■■□□□ 1.67
EDEM3-206ENST00000474725 ZNF831Q5JPB2 1677 aa25.47■■□□□ 1.67
EDEM3-206ENST00000474725 ARFGEF2Q9Y6D5 1785 aa25.47■■□□□ 1.67
EDEM3-206ENST00000474725 SIRT2Q8IXJ6 389 aa25.47■■□□□ 1.67
EDEM3-206ENST00000474725 GNAI2P04899 355 aa25.46■■□□□ 1.67
EDEM3-206ENST00000474725 ZBTB3Q9H5J0 574 aa25.46■■□□□ 1.67
EDEM3-206ENST00000474725 IL6STP40189 918 aaPredicted RBP25.45■■□□□ 1.67
EDEM3-206ENST00000474725 LINC00116Q8NCU8 138 aa25.45■■□□□ 1.67
EDEM3-206ENST00000474725 TRIM37O94972 964 aa25.45■■□□□ 1.66
EDEM3-206ENST00000474725 NEURL1BA8MQ27 555 aa25.44■■□□□ 1.66
EDEM3-206ENST00000474725 UBTFL1P0CB47 393 aaPredicted RBP25.44■■□□□ 1.66
EDEM3-206ENST00000474725 NUP188Q5SRE5 1749 aa25.44■■□□□ 1.66
EDEM3-206ENST00000474725 NBPF7P0C2Y1 421 aaPredicted RBP25.43■■□□□ 1.66
EDEM3-206ENST00000474725 CEP85Q6P2H3 762 aa25.43■■□□□ 1.66
EDEM3-206ENST00000474725 KIF6Q6ZMV9 814 aa25.43■■□□□ 1.66
EDEM3-206ENST00000474725 ANKRD44Q8N8A2 993 aa25.43■■□□□ 1.66
EDEM3-206ENST00000474725 ARXQ96QS3 562 aa25.43■■□□□ 1.66
EDEM3-206ENST00000474725 COL5A3P25940 1745 aaPredicted RBP25.43■■□□□ 1.66
EDEM3-206ENST00000474725 RPAP2Q8IXW5 612 aaPredicted RBP25.43■■□□□ 1.66
EDEM3-206ENST00000474725 CCNL1Q9UK58 526 aaPredicted RBP25.43■■□□□ 1.66
EDEM3-206ENST00000474725 RREB1Q92766 1687 aa25.43■■□□□ 1.66
EDEM3-206ENST00000474725 ATP5J2-PTCD1G3V325 749 aa25.42■■□□□ 1.66
EDEM3-206ENST00000474725 C9orf78Q9NZ63 289 aaPredicted RBP25.42■■□□□ 1.66
EDEM3-206ENST00000474725 LRRFIP2Q9Y608 721 aaKnown RBP25.42■■□□□ 1.66
EDEM3-206ENST00000474725 EIF5P55010 431 aaKnown RBP25.41■■□□□ 1.66
EDEM3-206ENST00000474725 LY75O60449 1722 aa25.41■■□□□ 1.66
EDEM3-206ENST00000474725 MYH14Q7Z406 1995 aaKnown RBP25.41■■□□□ 1.66
EDEM3-206ENST00000474725 GCKRQ14397 625 aa25.4■■□□□ 1.66
EDEM3-206ENST00000474725 NPM2Q86SE8 214 aaKnown RBP25.4■■□□□ 1.66
EDEM3-206ENST00000474725 SKAP1Q86WV1 359 aa25.4■■□□□ 1.66
EDEM3-206ENST00000474725 MAP3K15Q6ZN16 1313 aa25.4■■□□□ 1.66
EDEM3-206ENST00000474725 GRM8O00222 908 aa25.39■■□□□ 1.66
EDEM3-206ENST00000474725 TBC1D2BQ9UPU7 963 aa25.39■■□□□ 1.65
EDEM3-206ENST00000474725 IBTKQ9P2D0 1353 aaPredicted RBP25.38■■□□□ 1.65
EDEM3-206ENST00000474725 DZIP3Q86Y13 1208 aaKnown RBP25.38■■□□□ 1.65
EDEM3-206ENST00000474725 UTYO14607 1347 aa25.38■■□□□ 1.65
EDEM3-206ENST00000474725 CNTNAP4Q9C0A0 1308 aa25.38■■□□□ 1.65
EDEM3-206ENST00000474725 HLFQ16534 295 aa25.37■■□□□ 1.65
EDEM3-206ENST00000474725 SMC5Q8IY18 1101 aa25.37■■□□□ 1.65
EDEM3-206ENST00000474725 AFDNP55196 1824 aaKnown RBP25.37■■□□□ 1.65
EDEM3-206ENST00000474725 TCIRG1Q13488 830 aa25.36■■□□□ 1.65
EDEM3-206ENST00000474725 ATP8B2P98198 1209 aa25.35■■□□□ 1.65
EDEM3-206ENST00000474725 RC3H1Q5TC82 1133 aaKnown RBP25.35■■□□□ 1.65
EDEM3-206ENST00000474725 GIGYF2Q6Y7W6 1299 aaKnown RBP25.35■■□□□ 1.65
EDEM3-206ENST00000474725 ISCA1Q9BUE6 129 aa25.35■■□□□ 1.65
EDEM3-206ENST00000474725 ERVV-1B6SEH8 477 aa25.34■■□□□ 1.65
EDEM3-206ENST00000474725 LRRC4BQ9NT99 713 aa25.34■■□□□ 1.65
EDEM3-206ENST00000474725 PDZRN3Q9UPQ7 1066 aa25.34■■□□□ 1.65
EDEM3-206ENST00000474725 JARID2Q92833 1246 aaPredicted RBP25.33■■□□□ 1.65
EDEM3-206ENST00000474725 SUCLG2Q96I99 432 aa25.33■■□□□ 1.65
EDEM3-206ENST00000474725 CWC25Q9NXE8 425 aaPredicted RBP25.33■■□□□ 1.65
EDEM3-206ENST00000474725 A0A087WZG4 1122 aa25.33■■□□□ 1.65
EDEM3-206ENST00000474725 PNMA6EA0A0J9YXQ4 647 aa25.33■■□□□ 1.65
EDEM3-206ENST00000474725 CCDC191Q8NCU4 936 aa25.33■■□□□ 1.65
EDEM3-206ENST00000474725 HDAC5Q9UQL6 1122 aa25.33■■□□□ 1.65
EDEM3-206ENST00000474725 COL15A1P39059 1388 aa25.32■■□□□ 1.64
EDEM3-206ENST00000474725 HMMRO75330 724 aa25.32■■□□□ 1.64
EDEM3-206ENST00000474725 GCC1Q96CN9 775 aa25.32■■□□□ 1.64
EDEM3-206ENST00000474725 TAF1LQ8IZX4 1826 aa25.32■■□□□ 1.64
EDEM3-206ENST00000474725 DCTPP1Q9H773 170 aa25.31■■□□□ 1.64
EDEM3-206ENST00000474725 TRIM28Q13263 835 aaKnown RBP25.31■■□□□ 1.64
EDEM3-206ENST00000474725 KAZALD1Q96I82 304 aa25.31■■□□□ 1.64
EDEM3-206ENST00000474725 RPS6KA4O75676 772 aa25.3■■□□□ 1.64
EDEM3-206ENST00000474725 HSP90AB3PQ58FF7 597 aa25.3■■□□□ 1.64
EDEM3-206ENST00000474725 SMIM5Q71RC9 77 aa25.3■■□□□ 1.64
EDEM3-206ENST00000474725 UBE3BQ7Z3V4 1068 aa25.3■■□□□ 1.64
EDEM3-206ENST00000474725 H7C1W4 665 aa25.29■■□□□ 1.64
EDEM3-206ENST00000474725 CAMTA2O94983 1202 aa25.29■■□□□ 1.64
EDEM3-206ENST00000474725 SLC27A3Q5K4L6 730 aa25.29■■□□□ 1.64
EDEM3-206ENST00000474725 PPP1R42Q7Z4L9 355 aa25.29■■□□□ 1.64
EDEM3-206ENST00000474725 EP400Q96L91 3159 aa25.29■■□□□ 1.64
EDEM3-206ENST00000474725 GNPATO15228 680 aa25.29■■□□□ 1.64
EDEM3-206ENST00000474725 CASP7P55210 303 aa25.29■■□□□ 1.64
EDEM3-206ENST00000474725 APBA3O96018 575 aa25.28■■□□□ 1.64
EDEM3-206ENST00000474725 GPTP24298 496 aa25.28■■□□□ 1.64
EDEM3-206ENST00000474725 C4BP0C0L5 1744 aa25.28■■□□□ 1.64
EDEM3-206ENST00000474725 NUP98P52948 1817 aa25.28■■□□□ 1.64
EDEM3-206ENST00000474725 ILDR1Q86SU0 546 aaPredicted RBP25.27■■□□□ 1.64
EDEM3-206ENST00000474725 SSH3Q8TE77 659 aa25.27■■□□□ 1.64
EDEM3-206ENST00000474725 BICC1Q9H694 974 aaKnown RBP25.27■■□□□ 1.64
EDEM3-206ENST00000474725 NUCB1Q02818 461 aa25.27■■□□□ 1.64
EDEM3-206ENST00000474725 PROM2Q8N271 834 aa25.27■■□□□ 1.64
EDEM3-206ENST00000474725 SRGAP3O43295 1099 aa25.26■■□□□ 1.63
EDEM3-206ENST00000474725 RGS3P49796 1198 aa25.26■■□□□ 1.63
EDEM3-206ENST00000474725 POLA2Q14181 598 aa25.26■■□□□ 1.63
EDEM3-206ENST00000474725 TXNRD1Q16881 649 aa25.26■■□□□ 1.63
EDEM3-206ENST00000474725 RTL5Q5HYW3 569 aaPredicted RBP25.26■■□□□ 1.63
EDEM3-206ENST00000474725 EPHA10Q5JZY3 1008 aa25.26■■□□□ 1.63
EDEM3-206ENST00000474725 ANKRD45Q5TZF3 282 aa25.26■■□□□ 1.63
EDEM3-206ENST00000474725 RTCBQ9Y3I0 505 aaKnown RBP25.26■■□□□ 1.63
EDEM3-206ENST00000474725 PLSCR1O15162 318 aa25.25■■□□□ 1.63
EDEM3-206ENST00000474725 MTX1Q13505 466 aa25.25■■□□□ 1.63
EDEM3-206ENST00000474725 NLRP10Q86W26 655 aa25.25■■□□□ 1.63
EDEM3-206ENST00000474725 ZNF34Q8IZ26 560 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms