RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 SETDB2Q96T68 719 aa21.49■■□□□ 1.03
CPA4-205ENST00000474254 GLTPD2A6NH11 291 aa21.48■■□□□ 1.03
CPA4-205ENST00000474254 SNRPA1P09661 255 aaKnown RBP21.48■■□□□ 1.03
CPA4-205ENST00000474254 ST5P78524 1137 aa21.48■■□□□ 1.03
CPA4-205ENST00000474254 CNBD1Q8NA66 436 aa21.48■■□□□ 1.03
CPA4-205ENST00000474254 PRAMEF22A3QJZ6 481 aa21.47■■□□□ 1.03
CPA4-205ENST00000474254 DZIP3Q86Y13 1208 aaKnown RBP21.47■■□□□ 1.03
CPA4-205ENST00000474254 CCDC24Q8N4L8 307 aa21.47■■□□□ 1.03
CPA4-205ENST00000474254 PNISRQ8TF01 805 aaKnown RBP21.47■■□□□ 1.03
CPA4-205ENST00000474254 THUMPD2Q9BTF0 503 aaKnown RBP21.47■■□□□ 1.03
CPA4-205ENST00000474254 ZNF219Q9P2Y4 722 aaPredicted RBP21.47■■□□□ 1.03
CPA4-205ENST00000474254 USP16Q9Y5T5 823 aa21.47■■□□□ 1.03
CPA4-205ENST00000474254 DICER1Q9UPY3 1922 aaKnown RBP21.47■■□□□ 1.03
CPA4-205ENST00000474254 NFKBIEO00221 500 aa21.46■■□□□ 1.03
CPA4-205ENST00000474254 CAMTA2O94983 1202 aa21.46■■□□□ 1.03
CPA4-205ENST00000474254 VEGFAP15692 232 aaPredicted RBP21.46■■□□□ 1.03
CPA4-205ENST00000474254 FER1L6Q2WGJ9 1857 aa21.45■■□□□ 1.02
CPA4-205ENST00000474254 C21orf2O43822 256 aa21.45■■□□□ 1.02
CPA4-205ENST00000474254 PRELPP51888 382 aa21.45■■□□□ 1.02
CPA4-205ENST00000474254 HTRA3P83110 453 aa21.45■■□□□ 1.02
CPA4-205ENST00000474254 KLRG1Q96E93 195 aa21.45■■□□□ 1.02
CPA4-205ENST00000474254 ARFGEF2Q9Y6D5 1785 aa21.44■■□□□ 1.02
CPA4-205ENST00000474254 WDR43Q15061 677 aaKnown RBP eCLIP21.44■■□□□ 1.02
CPA4-205ENST00000474254 DPY19L2Q6NUT2 758 aa21.44■■□□□ 1.02
CPA4-205ENST00000474254 MIS18AQ9NYP9 233 aa21.44■■□□□ 1.02
CPA4-205ENST00000474254 TMPOP42166 694 aaKnown RBP21.43■■□□□ 1.02
CPA4-205ENST00000474254 RIPK4P57078 832 aa21.43■■□□□ 1.02
CPA4-205ENST00000474254 CNKSR1Q969H4 720 aa21.43■■□□□ 1.02
CPA4-205ENST00000474254 ZNF652Q9Y2D9 606 aa21.43■■□□□ 1.02
CPA4-205ENST00000474254 PIP4K2AP48426 406 aaPredicted RBP21.42■■□□□ 1.02
CPA4-205ENST00000474254 NUP98P52948 1817 aa21.42■■□□□ 1.02
CPA4-205ENST00000474254 LMOD3Q0VAK6 560 aa21.42■■□□□ 1.02
CPA4-205ENST00000474254 ERFEQ4G0M1 354 aa21.41■■□□□ 1.02
CPA4-205ENST00000474254 SOGA3Q5TF21 947 aa21.41■■□□□ 1.02
CPA4-205ENST00000474254 STYK1Q6J9G0 422 aa21.41■■□□□ 1.02
CPA4-205ENST00000474254 NBPF5PQ86XG9 351 aaPredicted RBP21.41■■□□□ 1.02
CPA4-205ENST00000474254 CCDC146Q8IYE0 955 aa21.41■■□□□ 1.02
CPA4-205ENST00000474254 TAOK3Q9H2K8 898 aa21.41■■□□□ 1.02
CPA4-205ENST00000474254 SLX4Q8IY92 1834 aa21.41■■□□□ 1.02
CPA4-205ENST00000474254 EIF4A1P60842 406 aaKnown RBP21.4■■□□□ 1.02
CPA4-205ENST00000474254 CLEC4GQ6UXB4 293 aa21.4■■□□□ 1.02
CPA4-205ENST00000474254 RUNDC1Q96C34 613 aa21.4■■□□□ 1.02
CPA4-205ENST00000474254 MASTLQ96GX5 879 aa21.4■■□□□ 1.02
CPA4-205ENST00000474254 LTBP3Q9NS15 1303 aa21.39■■□□□ 1.01
CPA4-205ENST00000474254 NBPF26B4DH59 902 aa21.39■■□□□ 1.01
CPA4-205ENST00000474254 PRPF40BQ6NWY9 871 aaKnown RBP21.39■■□□□ 1.01
CPA4-205ENST00000474254 NBPF10Q6P3W6 841 aaKnown RBP21.39■■□□□ 1.01
CPA4-205ENST00000474254 NBPF15Q8N660 670 aa21.39■■□□□ 1.01
CPA4-205ENST00000474254 ADAMTS8Q9UP79 889 aa21.39■■□□□ 1.01
CPA4-205ENST00000474254 SRGNP10124 158 aa21.38■■□□□ 1.01
CPA4-205ENST00000474254 JMYQ8N9B5 988 aa21.37■■□□□ 1.01
CPA4-205ENST00000474254 RRP7AQ9Y3A4 280 aaKnown RBP21.37■■□□□ 1.01
CPA4-205ENST00000474254 BABAM1Q9NWV8 329 aa21.36■■□□□ 1.01
CPA4-205ENST00000474254 TSPYL4Q9UJ04 414 aa21.36■■□□□ 1.01
CPA4-205ENST00000474254 NIP7Q9Y221 180 aaKnown RBP eCLIP21.36■■□□□ 1.01
CPA4-205ENST00000474254 RGL2O15211 777 aa21.35■■□□□ 1.01
CPA4-205ENST00000474254 ZNF316A6NFI3 1004 aaPredicted RBP21.34■■□□□ 1.01
CPA4-205ENST00000474254 NPR1P16066 1061 aa21.34■■□□□ 1.01
CPA4-205ENST00000474254 TPTE2Q6XPS3 522 aa21.34■■□□□ 1.01
CPA4-205ENST00000474254 TRIM35Q9UPQ4 493 aa21.34■■□□□ 1.01
CPA4-205ENST00000474254 FAM177BA6PVY3 158 aa21.33■■□□□ 1.01
CPA4-205ENST00000474254 NEUROD2Q15784 382 aa21.33■■□□□ 1.01
CPA4-205ENST00000474254 CCDC93Q567U6 631 aa21.33■■□□□ 1.01
CPA4-205ENST00000474254 POTECB2RU33 542 aa21.32■■□□□ 1
CPA4-205ENST00000474254 GTF2E1P29083 439 aaPredicted RBP21.32■■□□□ 1
CPA4-205ENST00000474254 ANKRD36CQ5JPF3 1778 aa21.32■■□□□ 1
CPA4-205ENST00000474254 ERBB4Q15303 1308 aa21.31■■□□□ 1
CPA4-205ENST00000474254 DDNO94850 711 aaPredicted RBP21.3■■□□□ 1
CPA4-205ENST00000474254 CHADLQ6NUI6 762 aa21.29■■□□□ 1
CPA4-205ENST00000474254 SCN4AP35499 1836 aa21.28■■□□□ 1
CPA4-205ENST00000474254 IQCA1LA6NCM1 817 aa21.28■■□□□ 1
CPA4-205ENST00000474254 CHL1O00533 1208 aa21.28■■□□□ 1
CPA4-205ENST00000474254 FKBP4Q02790 459 aaKnown RBP eCLIP21.28■■□□□ 1
CPA4-205ENST00000474254 NGEFQ8N5V2 710 aa21.28■■□□□ 1
CPA4-205ENST00000474254 HLFQ16534 295 aa21.27■■□□□ 1
CPA4-205ENST00000474254 KIF6Q6ZMV9 814 aa21.27■■□□□ 1
CPA4-205ENST00000474254 NYXQ9GZU5 481 aa21.27■■□□□ 1
CPA4-205ENST00000474254 MAP3K15Q6ZN16 1313 aa21.27■□□□□ 0.99
CPA4-205ENST00000474254 KLRG2A4D1S0 409 aaPredicted RBP21.26■□□□□ 0.99
CPA4-205ENST00000474254 MYL6BP14649 208 aa21.26■□□□□ 0.99
CPA4-205ENST00000474254 ALDH1B1P30837 517 aa21.26■□□□□ 0.99
CPA4-205ENST00000474254 CCDC184Q52MB2 194 aa21.26■□□□□ 0.99
CPA4-205ENST00000474254 RTKN2Q8IZC4 609 aa21.26■□□□□ 0.99
CPA4-205ENST00000474254 C7orf43Q8WVR3 580 aa21.26■□□□□ 0.99
CPA4-205ENST00000474254 ERVV-1B6SEH8 477 aa21.25■□□□□ 0.99
CPA4-205ENST00000474254 APAF1O14727 1248 aa21.25■□□□□ 0.99
CPA4-205ENST00000474254 COL13A1Q5TAT6 717 aaPredicted RBP21.24■□□□□ 0.99
CPA4-205ENST00000474254 TTLL7Q6ZT98 887 aa21.24■□□□□ 0.99
CPA4-205ENST00000474254 LRP10Q7Z4F1 713 aa21.24■□□□□ 0.99
CPA4-205ENST00000474254 ZNF277Q9NRM2 450 aaPredicted RBP21.24■□□□□ 0.99
CPA4-205ENST00000474254 PDIA6Q15084 440 aa21.23■□□□□ 0.99
CPA4-205ENST00000474254 LAS1LQ9Y4W2 734 aaKnown RBP21.23■□□□□ 0.99
CPA4-205ENST00000474254 POTEIP0CG38 1075 aa21.22■□□□□ 0.99
CPA4-205ENST00000474254 POTEJP0CG39 1038 aa21.22■□□□□ 0.99
CPA4-205ENST00000474254 HSPA1AP0DMV8 641 aaKnown RBP21.22■□□□□ 0.99
CPA4-205ENST00000474254 HSPA1BP0DMV9 641 aaKnown RBP21.22■□□□□ 0.99
CPA4-205ENST00000474254 EIF2S2P20042 333 aaKnown RBP21.22■□□□□ 0.99
CPA4-205ENST00000474254 KRT24Q2M2I5 525 aa21.22■□□□□ 0.99
CPA4-205ENST00000474254 LDHDQ86WU2 507 aa21.22■□□□□ 0.99
CPA4-205ENST00000474254 L3MBTL3Q96JM7 780 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms