RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 DZIP3Q86Y13 1208 aaKnown RBP13.31□□□□□ -0.28
CASC3-204ENST00000474190 SGIP1Q9BQI5 828 aa13.31□□□□□ -0.28
CASC3-204ENST00000474190 MAP3K15Q6ZN16 1313 aa13.31□□□□□ -0.28
CASC3-204ENST00000474190 ERVV-1B6SEH8 477 aa13.3□□□□□ -0.28
CASC3-204ENST00000474190 AIMP1Q12904 312 aaKnown RBP13.3□□□□□ -0.28
CASC3-204ENST00000474190 SMC4Q9NTJ3 1288 aa13.3□□□□□ -0.28
CASC3-204ENST00000474190 RCAN3Q9UKA8 241 aa13.3□□□□□ -0.28
CASC3-204ENST00000474190 A0A087WZG4 1122 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 PI4KAP2A4QPH2 592 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 F6X3S4 739 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 RGL2O15211 777 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 IGKV5-2P06315 115 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 TM4SF1P30408 202 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 PI4KAP1Q8N8J0 262 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 FLAD1Q8NFF5 587 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 PLBD2Q8NHP8 589 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 STK31Q9BXU1 1019 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 ZBTB3Q9H5J0 574 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 NOB1Q9ULX3 412 aaKnown RBP13.29□□□□□ -0.28
CASC3-204ENST00000474190 ZNF330Q9Y3S2 320 aaPredicted RBP13.29□□□□□ -0.28
CASC3-204ENST00000474190 C4AP0C0L4 1744 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 RNF123Q5XPI4 1314 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 UBN2Q6ZU65 1347 aa13.29□□□□□ -0.28
CASC3-204ENST00000474190 CEP350Q5VT06 3117 aa13.28□□□□□ -0.28
CASC3-204ENST00000474190 QSER1Q2KHR3 1735 aa13.28□□□□□ -0.28
CASC3-204ENST00000474190 HMGB2P26583 209 aaKnown RBP13.28□□□□□ -0.28
CASC3-204ENST00000474190 DDR1Q08345 913 aa13.28□□□□□ -0.28
CASC3-204ENST00000474190 TBC1D9BQ66K14 1250 aa13.28□□□□□ -0.28
CASC3-204ENST00000474190 KSR2Q6VAB6 950 aa13.28□□□□□ -0.28
CASC3-204ENST00000474190 GIGYF2Q6Y7W6 1299 aaKnown RBP13.28□□□□□ -0.28
CASC3-204ENST00000474190 ANKRD13DQ6ZTN6 518 aa13.28□□□□□ -0.28
CASC3-204ENST00000474190 ZNF34Q8IZ26 560 aa13.28□□□□□ -0.28
CASC3-204ENST00000474190 ISCA1Q9BUE6 129 aa13.28□□□□□ -0.28
CASC3-204ENST00000474190 TRIM27P14373 513 aa13.27□□□□□ -0.29
CASC3-204ENST00000474190 RFC4P35249 363 aa13.27□□□□□ -0.29
CASC3-204ENST00000474190 PTGER2P43116 358 aa13.27□□□□□ -0.29
CASC3-204ENST00000474190 C1QTNF8P60827 252 aa13.27□□□□□ -0.29
CASC3-204ENST00000474190 NFIXQ14938 502 aa13.27□□□□□ -0.29
CASC3-204ENST00000474190 CLEC4GQ6UXB4 293 aa13.27□□□□□ -0.29
CASC3-204ENST00000474190 CHMP4AQ9BY43 222 aa13.27□□□□□ -0.29
CASC3-204ENST00000474190 ATP10DQ9P241 1426 aa13.27□□□□□ -0.29
CASC3-204ENST00000474190 CHD4Q14839 1912 aa13.27□□□□□ -0.29
CASC3-204ENST00000474190 ZBTB7AO95365 584 aa13.26□□□□□ -0.29
CASC3-204ENST00000474190 RLBP1P12271 317 aa13.26□□□□□ -0.29
CASC3-204ENST00000474190 SCN7AQ01118 1682 aa13.26□□□□□ -0.29
CASC3-204ENST00000474190 TCIRG1Q13488 830 aa13.26□□□□□ -0.29
CASC3-204ENST00000474190 BEND3Q5T5X7 828 aa13.26□□□□□ -0.29
CASC3-204ENST00000474190 MSL1Q68DK7 614 aa13.26□□□□□ -0.29
CASC3-204ENST00000474190 ARHGAP45Q92619 1136 aa13.26□□□□□ -0.29
CASC3-204ENST00000474190 METTL22Q9BUU2 404 aaPredicted RBP13.26□□□□□ -0.29
CASC3-204ENST00000474190 MAP3K2Q9Y2U5 619 aa13.26□□□□□ -0.29
CASC3-204ENST00000474190 ABCC4O15439 1325 aa13.25□□□□□ -0.29
CASC3-204ENST00000474190 PTPRCP08575 1304 aa13.25□□□□□ -0.29
CASC3-204ENST00000474190 POLRMTO00411 1230 aaKnown RBP13.25□□□□□ -0.29
CASC3-204ENST00000474190 PLIN1O60240 522 aa13.25□□□□□ -0.29
CASC3-204ENST00000474190 TRIM28Q13263 835 aaKnown RBP13.25□□□□□ -0.29
CASC3-204ENST00000474190 SLC16A10Q8TF71 515 aa13.25□□□□□ -0.29
CASC3-204ENST00000474190 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
CASC3-204ENST00000474190 ZPR1O75312 459 aa13.24□□□□□ -0.29
CASC3-204ENST00000474190 FKBP5Q13451 457 aaPredicted RBP13.24□□□□□ -0.29
CASC3-204ENST00000474190 C20orf194Q5TEA3 1177 aa13.24□□□□□ -0.29
CASC3-204ENST00000474190 NLRP10Q86W26 655 aa13.24□□□□□ -0.29
CASC3-204ENST00000474190 DNAAF4Q8WXU2 420 aa13.24□□□□□ -0.29
CASC3-204ENST00000474190 COL24A1Q17RW2 1714 aa13.24□□□□□ -0.29
CASC3-204ENST00000474190 KIF16BQ96L93 1317 aa13.23□□□□□ -0.29
CASC3-204ENST00000474190 ATP5J2-PTCD1G3V325 749 aa13.23□□□□□ -0.29
CASC3-204ENST00000474190 CASP7P55210 303 aa13.23□□□□□ -0.29
CASC3-204ENST00000474190 SUSD4Q5VX71 490 aa13.23□□□□□ -0.29
CASC3-204ENST00000474190 ATF7IPQ6VMQ6 1270 aa13.23□□□□□ -0.29
CASC3-204ENST00000474190 KIF6Q6ZMV9 814 aa13.23□□□□□ -0.29
CASC3-204ENST00000474190 SYNE4Q8N205 404 aa13.23□□□□□ -0.29
CASC3-204ENST00000474190 MTFR1LQ9H019 292 aa13.23□□□□□ -0.29
CASC3-204ENST00000474190 IBTKQ9P2D0 1353 aaPredicted RBP13.22□□□□□ -0.29
CASC3-204ENST00000474190 NEURL1BA8MQ27 555 aa13.22□□□□□ -0.29
CASC3-204ENST00000474190 NTSR2O95665 410 aa13.22□□□□□ -0.29
CASC3-204ENST00000474190 MMP10P09238 476 aa13.22□□□□□ -0.29
CASC3-204ENST00000474190 GPTP24298 496 aa13.22□□□□□ -0.29
CASC3-204ENST00000474190 CWF19L2Q2TBE0 894 aaKnown RBP13.22□□□□□ -0.29
CASC3-204ENST00000474190 RIC3Q7Z5B4 369 aa13.22□□□□□ -0.29
CASC3-204ENST00000474190 NLGN1Q8N2Q7 840 aa13.22□□□□□ -0.29
CASC3-204ENST00000474190 MYD88Q99836 296 aa13.22□□□□□ -0.29
CASC3-204ENST00000474190 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
CASC3-204ENST00000474190 MSH5O43196 834 aa13.21□□□□□ -0.29
CASC3-204ENST00000474190 BICDL1Q6ZP65 573 aa13.21□□□□□ -0.29
CASC3-204ENST00000474190 ARXQ96QS3 562 aa13.21□□□□□ -0.29
CASC3-204ENST00000474190 NIP7Q9Y221 180 aaKnown RBP eCLIP13.21□□□□□ -0.29
CASC3-204ENST00000474190 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
CASC3-204ENST00000474190 DDX58O95786 925 aaKnown RBP13.2□□□□□ -0.3
CASC3-204ENST00000474190 RRP1P56182 461 aaKnown RBP13.2□□□□□ -0.3
CASC3-204ENST00000474190 ZKSCAN2Q63HK3 967 aa13.2□□□□□ -0.3
CASC3-204ENST00000474190 INTS3Q68E01 1043 aaKnown RBP13.2□□□□□ -0.3
CASC3-204ENST00000474190 LINS1Q8NG48 757 aa13.2□□□□□ -0.3
CASC3-204ENST00000474190 PANK1Q8TE04 598 aa13.2□□□□□ -0.3
CASC3-204ENST00000474190 FRAT1Q92837 279 aaPredicted RBP13.2□□□□□ -0.3
CASC3-204ENST00000474190 API5Q9BZZ5 524 aaKnown RBP13.2□□□□□ -0.3
CASC3-204ENST00000474190 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
CASC3-204ENST00000474190 UTYO14607 1347 aa13.19□□□□□ -0.3
CASC3-204ENST00000474190 PXDNLA1KZ92 1463 aa13.19□□□□□ -0.3
CASC3-204ENST00000474190 H7C1W4 665 aa13.19□□□□□ -0.3
CASC3-204ENST00000474190 SERPINB2P05120 415 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms