RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 FMNL2Q96PY5 1086 aa23.49■■□□□ 1.35
CUL4A-208ENST00000474116 CACNA1SQ13698 1873 aa23.49■■□□□ 1.35
CUL4A-208ENST00000474116 CC2D1BQ5T0F9 858 aaKnown RBP23.48■■□□□ 1.35
CUL4A-208ENST00000474116 SOGA3Q5TF21 947 aa23.48■■□□□ 1.35
CUL4A-208ENST00000474116 GAS2L2Q8NHY3 880 aa23.48■■□□□ 1.35
CUL4A-208ENST00000474116 PASKQ96RG2 1323 aa23.48■■□□□ 1.35
CUL4A-208ENST00000474116 BCORQ6W2J9 1755 aa23.47■■□□□ 1.35
CUL4A-208ENST00000474116 KCNQ3O43525 872 aa23.47■■□□□ 1.35
CUL4A-208ENST00000474116 ST5P78524 1137 aa23.47■■□□□ 1.35
CUL4A-208ENST00000474116 L3MBTL3Q96JM7 780 aaPredicted RBP23.47■■□□□ 1.35
CUL4A-208ENST00000474116 CNTNAP1P78357 1384 aa23.47■■□□□ 1.35
CUL4A-208ENST00000474116 CEMIPQ8WUJ3 1361 aa23.47■■□□□ 1.35
CUL4A-208ENST00000474116 TAF1DQ9H5J8 278 aaPredicted RBP23.46■■□□□ 1.35
CUL4A-208ENST00000474116 SCN4AP35499 1836 aa23.45■■□□□ 1.34
CUL4A-208ENST00000474116 IQCA1LA6NCM1 817 aa23.45■■□□□ 1.34
CUL4A-208ENST00000474116 FOXN1O15353 648 aa23.45■■□□□ 1.34
CUL4A-208ENST00000474116 LDHDQ86WU2 507 aa23.45■■□□□ 1.34
CUL4A-208ENST00000474116 DZIP3Q86Y13 1208 aaKnown RBP23.45■■□□□ 1.34
CUL4A-208ENST00000474116 U2SURPO15042 1029 aaKnown RBP23.44■■□□□ 1.34
CUL4A-208ENST00000474116 NPHP1O15259 732 aa23.44■■□□□ 1.34
CUL4A-208ENST00000474116 NPM2Q86SE8 214 aaKnown RBP23.44■■□□□ 1.34
CUL4A-208ENST00000474116 USP16Q9Y5T5 823 aa23.44■■□□□ 1.34
CUL4A-208ENST00000474116 KLRG2A4D1S0 409 aaPredicted RBP23.43■■□□□ 1.34
CUL4A-208ENST00000474116 ITGBL1O95965 494 aaPredicted RBP23.43■■□□□ 1.34
CUL4A-208ENST00000474116 BTBD11A6QL63 1104 aa23.42■■□□□ 1.34
CUL4A-208ENST00000474116 CLEC4GQ6UXB4 293 aa23.42■■□□□ 1.34
CUL4A-208ENST00000474116 PRDM10Q9NQV6 1147 aa23.42■■□□□ 1.34
CUL4A-208ENST00000474116 NPR1P16066 1061 aa23.41■■□□□ 1.34
CUL4A-208ENST00000474116 PIP4K2AP48426 406 aaPredicted RBP23.41■■□□□ 1.34
CUL4A-208ENST00000474116 CCDC93Q567U6 631 aa23.41■■□□□ 1.34
CUL4A-208ENST00000474116 NBPF5PQ86XG9 351 aaPredicted RBP23.41■■□□□ 1.34
CUL4A-208ENST00000474116 PHACTR3Q96KR7 559 aa23.41■■□□□ 1.34
CUL4A-208ENST00000474116 PRAMEF22A3QJZ6 481 aa23.4■■□□□ 1.34
CUL4A-208ENST00000474116 VEGFBP49765 207 aa23.4■■□□□ 1.34
CUL4A-208ENST00000474116 FKBP4Q02790 459 aaKnown RBP eCLIP23.4■■□□□ 1.34
CUL4A-208ENST00000474116 NPC1L1Q9UHC9 1359 aa23.4■■□□□ 1.34
CUL4A-208ENST00000474116 ZNF541Q9H0D2 1346 aa23.39■■□□□ 1.34
CUL4A-208ENST00000474116 TMEM88BA6NKF7 163 aa23.39■■□□□ 1.33
CUL4A-208ENST00000474116 ADAMTSL1Q8N6G6 1762 aa23.38■■□□□ 1.33
CUL4A-208ENST00000474116 ZNF277Q9NRM2 450 aaPredicted RBP23.38■■□□□ 1.33
CUL4A-208ENST00000474116 OLFM4Q6UX06 510 aa23.37■■□□□ 1.33
CUL4A-208ENST00000474116 CTCFP49711 727 aaPredicted RBP23.36■■□□□ 1.33
CUL4A-208ENST00000474116 TPTE2Q6XPS3 522 aa23.36■■□□□ 1.33
CUL4A-208ENST00000474116 RSPH6AQ9H0K4 717 aa23.36■■□□□ 1.33
CUL4A-208ENST00000474116 HACL1Q9UJ83 578 aa23.36■■□□□ 1.33
CUL4A-208ENST00000474116 ZNF652Q9Y2D9 606 aa23.36■■□□□ 1.33
CUL4A-208ENST00000474116 RGL2O15211 777 aa23.35■■□□□ 1.33
CUL4A-208ENST00000474116 SNRPA1P09661 255 aaKnown RBP23.35■■□□□ 1.33
CUL4A-208ENST00000474116 PRKAR2BP31323 418 aa23.35■■□□□ 1.33
CUL4A-208ENST00000474116 EAPPQ56P03 285 aaPredicted RBP23.35■■□□□ 1.33
CUL4A-208ENST00000474116 RTKN2Q8IZC4 609 aa23.35■■□□□ 1.33
CUL4A-208ENST00000474116 WBP1LQ9NX94 342 aa23.35■■□□□ 1.33
CUL4A-208ENST00000474116 NBPF26B4DH59 902 aa23.34■■□□□ 1.33
CUL4A-208ENST00000474116 FZD9O00144 591 aa23.34■■□□□ 1.33
CUL4A-208ENST00000474116 EPHX2P34913 555 aa23.34■■□□□ 1.33
CUL4A-208ENST00000474116 NBPF10Q6P3W6 841 aaKnown RBP23.34■■□□□ 1.33
CUL4A-208ENST00000474116 NBPF15Q8N660 670 aa23.34■■□□□ 1.33
CUL4A-208ENST00000474116 AIDAQ96BJ3 306 aa23.33■■□□□ 1.33
CUL4A-208ENST00000474116 NIP7Q9Y221 180 aaKnown RBP eCLIP23.33■■□□□ 1.33
CUL4A-208ENST00000474116 CLEC11AQ9Y240 323 aa23.33■■□□□ 1.33
CUL4A-208ENST00000474116 IARSP41252 1262 aaKnown RBP23.32■■□□□ 1.32
CUL4A-208ENST00000474116 CNGB1Q14028 1251 aaPredicted RBP23.32■■□□□ 1.32
CUL4A-208ENST00000474116 SYNE4Q8N205 404 aa23.32■■□□□ 1.32
CUL4A-208ENST00000474116 RASSF10A6NK89 507 aa23.31■■□□□ 1.32
CUL4A-208ENST00000474116 PNMA8AQ86V59 439 aaPredicted RBP23.31■■□□□ 1.32
CUL4A-208ENST00000474116 CNTROBQ8N137 903 aa23.31■■□□□ 1.32
CUL4A-208ENST00000474116 SNED1Q8TER0 1413 aa23.31■■□□□ 1.32
CUL4A-208ENST00000474116 RNF123Q5XPI4 1314 aa23.31■■□□□ 1.32
CUL4A-208ENST00000474116 ALDH1B1P30837 517 aa23.3■■□□□ 1.32
CUL4A-208ENST00000474116 LBX1P52954 281 aa23.3■■□□□ 1.32
CUL4A-208ENST00000474116 HLFQ16534 295 aa23.3■■□□□ 1.32
CUL4A-208ENST00000474116 MAP1SQ66K74 1059 aaPredicted RBP23.3■■□□□ 1.32
CUL4A-208ENST00000474116 MCM10Q7L590 875 aa23.3■■□□□ 1.32
CUL4A-208ENST00000474116 FAM177BA6PVY3 158 aa23.29■■□□□ 1.32
CUL4A-208ENST00000474116 DEFB115Q30KQ5 88 aa23.29■■□□□ 1.32
CUL4A-208ENST00000474116 GPC2Q8N158 579 aa23.29■■□□□ 1.32
CUL4A-208ENST00000474116 CCER1Q8TC90 406 aaPredicted RBP23.28■■□□□ 1.32
CUL4A-208ENST00000474116 PSMD1Q99460 953 aa23.28■■□□□ 1.32
CUL4A-208ENST00000474116 HSPA8P11142 646 aaKnown RBP23.26■■□□□ 1.31
CUL4A-208ENST00000474116 CRY2Q49AN0 593 aa23.26■■□□□ 1.31
CUL4A-208ENST00000474116 RTF1Q92541 710 aaKnown RBP23.26■■□□□ 1.31
CUL4A-208ENST00000474116 WDR33Q9C0J8 1336 aaKnown RBP23.26■■□□□ 1.31
CUL4A-208ENST00000474116 COL4A5P29400 1685 aa23.25■■□□□ 1.31
CUL4A-208ENST00000474116 DCTN1Q14203 1278 aa23.25■■□□□ 1.31
CUL4A-208ENST00000474116 CFAP53Q96M91 514 aa23.25■■□□□ 1.31
CUL4A-208ENST00000474116 LTBP1Q14766 1721 aa23.24■■□□□ 1.31
CUL4A-208ENST00000474116 HTATSF1O43719 755 aaKnown RBP23.23■■□□□ 1.31
CUL4A-208ENST00000474116 GTF2E1P29083 439 aaPredicted RBP23.23■■□□□ 1.31
CUL4A-208ENST00000474116 JDP2Q8WYK2 163 aa23.23■■□□□ 1.31
CUL4A-208ENST00000474116 DDX21Q9NR30 783 aaKnown RBP eCLIP23.23■■□□□ 1.31
CUL4A-208ENST00000474116 NUDCQ9Y266 331 aa23.23■■□□□ 1.31
CUL4A-208ENST00000474116 ABCC12Q96J65 1359 aa23.23■■□□□ 1.31
CUL4A-208ENST00000474116 MAP2K1Q02750 393 aaPredicted RBP23.22■■□□□ 1.31
CUL4A-208ENST00000474116 CC2D2BQ6DHV5 1058 aa23.22■■□□□ 1.31
CUL4A-208ENST00000474116 U2AF1L5P0DN76 240 aaPredicted RBP23.21■■□□□ 1.31
CUL4A-208ENST00000474116 HOXA10P31260 410 aaPredicted RBP23.21■■□□□ 1.31
CUL4A-208ENST00000474116 U2AF1Q01081 240 aaKnown RBP eCLIP23.21■■□□□ 1.31
CUL4A-208ENST00000474116 TAF7Q15545 349 aaPredicted RBP23.21■■□□□ 1.31
CUL4A-208ENST00000474116 NUTM1Q86Y26 1132 aa23.21■■□□□ 1.31
CUL4A-208ENST00000474116 NYXQ9GZU5 481 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms