RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-211	ENST00000474088	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.92	■■■□□ 2.86
PKD1-211	ENST00000474088	ZNF652	Q9Y2D9	606 aa		32.92	■■■□□ 2.86
PKD1-211	ENST00000474088	CNKSR1	Q969H4	720 aa		32.91	■■■□□ 2.86
PKD1-211	ENST00000474088	SRGN	P10124	158 aa		32.9	■■■□□ 2.86
PKD1-211	ENST00000474088	STYK1	Q6J9G0	422 aa		32.9	■■■□□ 2.86
PKD1-211	ENST00000474088	COL11A2	P13942	1736 aa	Predicted RBP	32.9	■■■□□ 2.86
PKD1-211	ENST00000474088	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.89	■■■□□ 2.86
PKD1-211	ENST00000474088	PLEKHF1	Q96S99	279 aa		32.89	■■■□□ 2.86
PKD1-211	ENST00000474088	VEGFA	P15692	232 aa	Predicted RBP	32.88	■■■□□ 2.85
PKD1-211	ENST00000474088	MASTL	Q96GX5	879 aa		32.88	■■■□□ 2.85
PKD1-211	ENST00000474088	CCDC88A	Q3V6T2	1871 aa		32.87	■■■□□ 2.85
PKD1-211	ENST00000474088	RGL2	O15211	777 aa		32.87	■■■□□ 2.85
PKD1-211	ENST00000474088	PNISR	Q8TF01	805 aa	Known RBP	32.87	■■■□□ 2.85
PKD1-211	ENST00000474088	SMC1B	Q8NDV3	1235 aa		32.85	■■■□□ 2.85
PKD1-211	ENST00000474088	IFFO2	Q5TF58	517 aa		32.84	■■■□□ 2.85
PKD1-211	ENST00000474088	DPY19L2	Q6NUT2	758 aa		32.84	■■■□□ 2.85
PKD1-211	ENST00000474088	PRPF40B	Q6NWY9	871 aa	Known RBP	32.84	■■■□□ 2.85
PKD1-211	ENST00000474088	TPTE2	Q6XPS3	522 aa		32.84	■■■□□ 2.85
PKD1-211	ENST00000474088	NIP7	Q9Y221	180 aa	Known RBP eCLIP	32.84	■■■□□ 2.85
PKD1-211	ENST00000474088	LTBP3	Q9NS15	1303 aa		32.83	■■■□□ 2.85
PKD1-211	ENST00000474088	TIAM2	Q8IVF5	1701 aa		32.83	■■■□□ 2.85
PKD1-211	ENST00000474088	NFE2L2	Q16236	605 aa		32.83	■■■□□ 2.85
PKD1-211	ENST00000474088	ERFE	Q4G0M1	354 aa		32.83	■■■□□ 2.85
PKD1-211	ENST00000474088	WDR90	Q96KV7	1748 aa		32.82	■■■□□ 2.85
PKD1-211	ENST00000474088	FER1L6	Q2WGJ9	1857 aa		32.82	■■■□□ 2.85
PKD1-211	ENST00000474088	TAOK3	Q9H2K8	898 aa		32.82	■■■□□ 2.84
PKD1-211	ENST00000474088	PNN	Q9H307	717 aa	Known RBP	32.82	■■■□□ 2.84
PKD1-211	ENST00000474088	DLG5	Q8TDM6	1919 aa		32.81	■■■□□ 2.84
PKD1-211	ENST00000474088	HTRA3	P83110	453 aa		32.81	■■■□□ 2.84
PKD1-211	ENST00000474088	HLF	Q16534	295 aa		32.81	■■■□□ 2.84
PKD1-211	ENST00000474088	SOGA3	Q5TF21	947 aa		32.81	■■■□□ 2.84
PKD1-211	ENST00000474088	SLX4	Q8IY92	1834 aa		32.81	■■■□□ 2.84
PKD1-211	ENST00000474088	KLRG2	A4D1S0	409 aa	Predicted RBP	32.8	■■■□□ 2.84
PKD1-211	ENST00000474088	EIF4A1	P60842	406 aa	Known RBP	32.8	■■■□□ 2.84
PKD1-211	ENST00000474088	POTEC	B2RU33	542 aa		32.79	■■■□□ 2.84
PKD1-211	ENST00000474088	THUMPD2	Q9BTF0	503 aa	Known RBP	32.79	■■■□□ 2.84
PKD1-211	ENST00000474088	NPR1	P16066	1061 aa		32.78	■■■□□ 2.84
PKD1-211	ENST00000474088	FAM177B	A6PVY3	158 aa		32.77	■■■□□ 2.84
PKD1-211	ENST00000474088	NGEF	Q8N5V2	710 aa		32.77	■■■□□ 2.84
PKD1-211	ENST00000474088	C7orf43	Q8WVR3	580 aa		32.77	■■■□□ 2.84
PKD1-211	ENST00000474088	MAPK8IP3	Q9UPT6	1336 aa		32.77	■■■□□ 2.84
PKD1-211	ENST00000474088	LAMB4	A4D0S4	1761 aa		32.76	■■■□□ 2.84
PKD1-211	ENST00000474088	KDM3B	Q7LBC6	1761 aa		32.76	■■■□□ 2.84
PKD1-211	ENST00000474088	DICER1	Q9UPY3	1922 aa	Known RBP	32.75	■■■□□ 2.83
PKD1-211	ENST00000474088	KLRG1	Q96E93	195 aa		32.75	■■■□□ 2.83
PKD1-211	ENST00000474088	ARFGEF2	Q9Y6D5	1785 aa		32.75	■■■□□ 2.83
PKD1-211	ENST00000474088	CACNA1S	Q13698	1873 aa		32.74	■■■□□ 2.83
PKD1-211	ENST00000474088	ERVV-1	B6SEH8	477 aa		32.74	■■■□□ 2.83
PKD1-211	ENST00000474088	RRP7A	Q9Y3A4	280 aa	Known RBP	32.74	■■■□□ 2.83
PKD1-211	ENST00000474088	GTF2E1	P29083	439 aa	Predicted RBP	32.72	■■■□□ 2.83
PKD1-211	ENST00000474088	CCDC93	Q567U6	631 aa		32.72	■■■□□ 2.83
PKD1-211	ENST00000474088	MAP3K15	Q6ZN16	1313 aa		32.71	■■■□□ 2.83
PKD1-211	ENST00000474088	RALBP1	Q15311	655 aa		32.7	■■■□□ 2.83
PKD1-211	ENST00000474088	DDN	O94850	711 aa	Predicted RBP	32.69	■■■□□ 2.82
PKD1-211	ENST00000474088	MYL6B	P14649	208 aa		32.69	■■■□□ 2.82
PKD1-211	ENST00000474088	TTLL7	Q6ZT98	887 aa		32.69	■■■□□ 2.82
PKD1-211	ENST00000474088	JMY	Q8N9B5	988 aa		32.69	■■■□□ 2.82
PKD1-211	ENST00000474088	ALDH1B1	P30837	517 aa		32.68	■■■□□ 2.82
PKD1-211	ENST00000474088	KIF6	Q6ZMV9	814 aa		32.68	■■■□□ 2.82
PKD1-211	ENST00000474088	NYX	Q9GZU5	481 aa		32.68	■■■□□ 2.82
PKD1-211	ENST00000474088	RIPK4	P57078	832 aa		32.66	■■■□□ 2.82
PKD1-211	ENST00000474088	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.66	■■■□□ 2.82
PKD1-211	ENST00000474088	OLFM4	Q6UX06	510 aa		32.65	■■■□□ 2.82
PKD1-211	ENST00000474088	NUTM1	Q86Y26	1132 aa		32.65	■■■□□ 2.82
PKD1-211	ENST00000474088	RTKN2	Q8IZC4	609 aa		32.65	■■■□□ 2.82
PKD1-211	ENST00000474088	TSPYL4	Q9UJ04	414 aa		32.65	■■■□□ 2.82
PKD1-211	ENST00000474088	ERBB4	Q15303	1308 aa		32.64	■■■□□ 2.82
PKD1-211	ENST00000474088	ZBTB3	Q9H5J0	574 aa		32.64	■■■□□ 2.82
PKD1-211	ENST00000474088	NUP98	P52948	1817 aa		32.63	■■■□□ 2.81
PKD1-211	ENST00000474088	CRY2	Q49AN0	593 aa		32.62	■■■□□ 2.81
PKD1-211	ENST00000474088	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.62	■■■□□ 2.81
PKD1-211	ENST00000474088	ABCC12	Q96J65	1359 aa		32.61	■■■□□ 2.81
PKD1-211	ENST00000474088	GPT	P24298	496 aa		32.61	■■■□□ 2.81
PKD1-211	ENST00000474088	ZNF34	Q8IZ26	560 aa		32.61	■■■□□ 2.81
PKD1-211	ENST00000474088	UBN2	Q6ZU65	1347 aa		32.6	■■■□□ 2.81
PKD1-211	ENST00000474088	TMPO	P42166	694 aa	Known RBP	32.6	■■■□□ 2.81
PKD1-211	ENST00000474088	SUSD4	Q5VX71	490 aa		32.6	■■■□□ 2.81
PKD1-211	ENST00000474088	BABAM1	Q9NWV8	329 aa		32.6	■■■□□ 2.81
PKD1-211	ENST00000474088	CHADL	Q6NUI6	762 aa		32.59	■■■□□ 2.81
PKD1-211	ENST00000474088	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.59	■■■□□ 2.81
PKD1-211	ENST00000474088	IBTK	Q9P2D0	1353 aa	Predicted RBP	32.58	■■■□□ 2.81
PKD1-211	ENST00000474088	DDX10	Q13206	875 aa	Known RBP	32.58	■■■□□ 2.81
PKD1-211	ENST00000474088	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.58	■■■□□ 2.81
PKD1-211	ENST00000474088	IQCA1L	A6NCM1	817 aa		32.57	■■■□□ 2.8
PKD1-211	ENST00000474088	EIF2S2	P20042	333 aa	Known RBP	32.57	■■■□□ 2.8
PKD1-211	ENST00000474088	LMOD3	Q0VAK6	560 aa		32.57	■■■□□ 2.8
PKD1-211	ENST00000474088	PDIA6	Q15084	440 aa		32.57	■■■□□ 2.8
PKD1-211	ENST00000474088	SYNE4	Q8N205	404 aa		32.57	■■■□□ 2.8
PKD1-211	ENST00000474088	POTEI	P0CG38	1075 aa		32.56	■■■□□ 2.8
PKD1-211	ENST00000474088	POTEJ	P0CG39	1038 aa		32.56	■■■□□ 2.8
PKD1-211	ENST00000474088	LRP10	Q7Z4F1	713 aa		32.56	■■■□□ 2.8
PKD1-211	ENST00000474088	RIC1	Q4ADV7	1423 aa		32.55	■■■□□ 2.8
PKD1-211	ENST00000474088	HOXA10	P31260	410 aa	Predicted RBP	32.55	■■■□□ 2.8
PKD1-211	ENST00000474088	IARS	P41252	1262 aa	Known RBP	32.55	■■■□□ 2.8
PKD1-211	ENST00000474088	RPGR	Q92834	1020 aa	Known RBP	32.55	■■■□□ 2.8
PKD1-211	ENST00000474088	NTSR2	O95665	410 aa		32.54	■■■□□ 2.8
PKD1-211	ENST00000474088	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.53	■■■□□ 2.8
PKD1-211	ENST00000474088	ZNF541	Q9H0D2	1346 aa		32.53	■■■□□ 2.8
PKD1-211	ENST00000474088	CC2D2B	Q6DHV5	1058 aa		32.53	■■■□□ 2.8
PKD1-211	ENST00000474088	PPP1R42	Q7Z4L9	355 aa		32.53	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms